RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 ZNF138P52744 262 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 CACNG8Q8WXS5 425 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 PLPPR2Q96GM1 343 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 RITA1Q96K30 269 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 TMEM133Q9H2Q1 129 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 TNFRSF18Q9Y5U5 241 aa7.31□□□□□ -1.24
HPS4-217ENST00000496385 IGHG4P01861 327 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 NMUP48645 174 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 CACNG7P62955 275 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 HERV-K104P63124 156 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 PCP2Q8IVA1 136 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 OR8A1Q8NGG7 326 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 S1PR3Q99500 378 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 C20orf78Q9BR46 151 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 A0A096LNJ9 63 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 A0A1B0GUT8 65 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 A0A1B0GWB2 263 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 TMEM262E9PQX1 116 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 LTAP01374 205 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 HBDP02042 147 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 C2orf83Q53S99 150 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 Q6AWC8 147 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 ZFAND6Q6FIF0 208 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 C18orf15Q96N68 181 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 RELNP78509 3460 aa7.3□□□□□ -1.24
HPS4-217ENST00000496385 DIDO1Q9BTC0 2240 aaKnown RBP7.3□□□□□ -1.24
HPS4-217ENST00000496385 COL6A6A6NMZ7 2263 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 SPINT2O43291 252 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 PRB1P04280 392 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 CLEC3BP05452 202 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 CSN3P07498 182 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 RND1Q92730 232 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 IFI27L1Q96BM0 104 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 NHP2Q9NX24 153 aaKnown RBP7.29□□□□□ -1.24
HPS4-217ENST00000496385 LINC01619G3V211 115 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 ZNF137PP52743 207 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 POU2AF1Q16633 256 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 RRN3P1Q2M238 152 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 TMEM116Q8NCL8 245 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 Q8TCH9 128 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 BBC3Q96PG8 261 aaPredicted RBP7.29□□□□□ -1.24
HPS4-217ENST00000496385 ZMAT4Q9H898 229 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 PRNDQ9UKY0 176 aa7.29□□□□□ -1.24
HPS4-217ENST00000496385 HCFC1P51610 2035 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 IGKV1OR2-108A0A075B7D4 117 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 MT-ATP8P03928 68 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 CD24P25063 80 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 TCTAP57738 103 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 PLP2Q04941 152 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 C12orf74Q32Q52 190 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 ZNF493Q6ZR52 646 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 OR1L8Q8NGR8 309 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 U3KQK5 164 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 NBASA2RRP1 2371 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 TRBV6-1A0A0K0K1D8 114 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 EVI2AP22794 236 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 GATA3P23771 443 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 MPV17P39210 176 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 PDPNQ86YL7 162 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 TEX29Q8N6K0 151 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 FXYD5Q96DB9 178 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 HES7Q9BYE0 225 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 ESPL1Q14674 2120 aa7.28□□□□□ -1.24
HPS4-217ENST00000496385 TRAV3A0A0B4J244 114 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 PSPNO60542 156 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 MOSP00540 346 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 SLC25A5P05141 298 aaKnown RBP7.27□□□□□ -1.25
HPS4-217ENST00000496385 RPL32P62910 135 aaKnown RBP7.27□□□□□ -1.25
HPS4-217ENST00000496385 SPINK14Q6IE38 97 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 ITLN1Q8WWA0 313 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 PPDPFLQ8WWR9 84 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 B4GALT7Q9UBV7 327 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 TIMM8BQ9Y5J9 83 aaPredicted RBP7.27□□□□□ -1.25
HPS4-217ENST00000496385 F11RQ9Y624 299 aaKnown RBP7.27□□□□□ -1.25
HPS4-217ENST00000496385 TET2Q6N021 2002 aaPredicted RBP7.27□□□□□ -1.25
HPS4-217ENST00000496385 RP1L1Q8IWN7 2480 aaPredicted RBP7.27□□□□□ -1.25
HPS4-217ENST00000496385 FAM208BQ5VWN6 2430 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 TRBV25-1A0A075B6N4 114 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 NPIPB5A8MRT5 1133 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 J3KRW8 73 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 COX7A2P2O60397 106 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 PROP1O75360 226 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 SRD5A1P18405 259 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 INSL3P51460 131 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 XGP55808 180 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 B3GALT5-AS1P59052 145 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 PRCDQ00LT1 54 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 CD69Q07108 199 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 ZNF766Q5HY98 468 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 CFAP126Q5VTH2 177 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 C10orf113Q5VZT2 155 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 GGNQ86UU5 652 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 OR10X1Q8NGY0 326 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 DDB2Q92466 427 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 PRELID3AQ96N28 172 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 PRRG4Q9BZD6 226 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 IFI27L2Q9H2X8 130 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 UFC1Q9Y3C8 167 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 SVILO95425 2214 aa7.27□□□□□ -1.25
HPS4-217ENST00000496385 IGKV3D-15A0A087WSY6 115 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms