RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 SELENOKQ9Y6D0 94 aa16.5■□□□□ 0.23
ECHDC3-205ENST00000496136 CD33P20138 364 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 DPPA3Q6W0C5 159 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 SSX7Q7RTT5 188 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 FAM213BQ8TBF2 198 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 GRAMD2BQ96HH9 432 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 FAM167A-AS1Q96KT0 104 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 HMGB3O15347 200 aaKnown RBP16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 BMI1P35226 326 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 IFITM2Q01629 132 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 RNF141Q8WVD5 230 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 GLMPQ8WWB7 406 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 SLC25A2Q9BXI2 301 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 TMEM231Q9H6L2 316 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 TECRQ9NZ01 308 aaKnown RBP16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 RNF24Q9Y225 148 aa16.49■□□□□ 0.23
ECHDC3-205ENST00000496136 ANK2Q01484 3957 aa16.48■□□□□ 0.23
ECHDC3-205ENST00000496136 SAP30O75446 220 aa16.48■□□□□ 0.23
ECHDC3-205ENST00000496136 IFNA7P01567 189 aa16.48■□□□□ 0.23
ECHDC3-205ENST00000496136 CTXND1A0A1B0GTU2 59 aa16.47■□□□□ 0.23
ECHDC3-205ENST00000496136 STAG3L2P0CL84 134 aa16.46■□□□□ 0.23
ECHDC3-205ENST00000496136 STAG3L3P0CL85 134 aa16.46■□□□□ 0.23
ECHDC3-205ENST00000496136 TAS2R45P59539 299 aa16.46■□□□□ 0.23
ECHDC3-205ENST00000496136 DEFB114Q30KQ6 69 aa16.46■□□□□ 0.23
ECHDC3-205ENST00000496136 BPIFA4PQ86YQ2 179 aa16.46■□□□□ 0.23
ECHDC3-205ENST00000496136 PKD1L1Q8TDX9 2849 aa16.46■□□□□ 0.23
ECHDC3-205ENST00000496136 MRPS12O15235 138 aaKnown RBP16.46■□□□□ 0.22
ECHDC3-205ENST00000496136 RPL7P18124 248 aaKnown RBP16.46■□□□□ 0.22
ECHDC3-205ENST00000496136 FAM90A2PQ658T7 463 aa16.46■□□□□ 0.22
ECHDC3-205ENST00000496136 ZNF503Q96F45 646 aa16.46■□□□□ 0.22
ECHDC3-205ENST00000496136 SMAD5-AS1Q9Y6J3 95 aa16.46■□□□□ 0.22
ECHDC3-205ENST00000496136 ZNF705EA8MWA4 302 aaPredicted RBP16.45■□□□□ 0.22
ECHDC3-205ENST00000496136 LCN15Q6UWW0 184 aa16.45■□□□□ 0.22
ECHDC3-205ENST00000496136 SIGLEC15Q6ZMC9 328 aa16.45■□□□□ 0.22
ECHDC3-205ENST00000496136 TCF24Q7RTU0 167 aa16.45■□□□□ 0.22
ECHDC3-205ENST00000496136 DYNLRB2Q8TF09 96 aa16.45■□□□□ 0.22
ECHDC3-205ENST00000496136 MBD3L1Q8WWY6 194 aa16.45■□□□□ 0.22
ECHDC3-205ENST00000496136 GPR82Q96P67 336 aa16.45■□□□□ 0.22
ECHDC3-205ENST00000496136 UBQLN2Q9UHD9 624 aa16.45■□□□□ 0.22
ECHDC3-205ENST00000496136 H2AFB1P0C5Y9 115 aa16.44■□□□□ 0.22
ECHDC3-205ENST00000496136 KHDC3LQ587J8 217 aa16.44■□□□□ 0.22
ECHDC3-205ENST00000496136 SFT2D1Q8WV19 159 aa16.44■□□□□ 0.22
ECHDC3-205ENST00000496136 MCRIP2Q9BUT9 160 aaKnown RBP16.44■□□□□ 0.22
ECHDC3-205ENST00000496136 OR51M1Q9H341 326 aa16.44■□□□□ 0.22
ECHDC3-205ENST00000496136 TMEM14CQ9P0S9 112 aa16.44■□□□□ 0.22
ECHDC3-205ENST00000496136 FBN3Q75N90 2809 aa16.44■□□□□ 0.22
ECHDC3-205ENST00000496136 OR7C2O60412 319 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 PYYP10082 97 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 GP9P14770 177 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 CD300EQ496F6 205 aaPredicted RBP16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 PQLC2Q6ZP29 291 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 STXBP6Q8NFX7 210 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 MAP1LC3B2A6NCE7 125 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 HELTA6NFD8 242 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 IGLV1-51P01701 117 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 CD5P06127 495 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 SNRPCP09234 159 aaKnown RBP16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 ARL14EPLP0DKL9 152 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 INSL3P51460 131 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 FGF8P55075 233 aaPredicted RBP16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 RPL11P62913 178 aaKnown RBP16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 C9orf66Q5T8R8 295 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 PAXXQ9BUH6 204 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 MAP1LC3BQ9GZQ8 125 aa16.43■□□□□ 0.22
ECHDC3-205ENST00000496136 OR10J4P0C629 311 aa16.42■□□□□ 0.22
ECHDC3-205ENST00000496136 IGLL1P15814 213 aa16.42■□□□□ 0.22
ECHDC3-205ENST00000496136 GALR1P47211 349 aa16.42■□□□□ 0.22
ECHDC3-205ENST00000496136 C17orf77Q96MU5 243 aa16.42■□□□□ 0.22
ECHDC3-205ENST00000496136 SORL1Q92673 2214 aa16.42■□□□□ 0.22
ECHDC3-205ENST00000496136 H3BQ15 152 aa16.41■□□□□ 0.22
ECHDC3-205ENST00000496136 CXorf1O96002 111 aa16.41■□□□□ 0.22
ECHDC3-205ENST00000496136 PRR31Q5SQ13 230 aa16.41■□□□□ 0.22
ECHDC3-205ENST00000496136 TMEM61Q8N0U2 210 aa16.41■□□□□ 0.22
ECHDC3-205ENST00000496136 SAT2Q96F10 170 aaPredicted RBP16.41■□□□□ 0.22
ECHDC3-205ENST00000496136 HRH4Q9H3N8 390 aa16.41■□□□□ 0.22
ECHDC3-205ENST00000496136 IGKV3-7A0A075B6H7 116 aa16.41■□□□□ 0.22
ECHDC3-205ENST00000496136 ZNF785A8K8V0 405 aa16.41■□□□□ 0.22
ECHDC3-205ENST00000496136 IGLC2P0DOY2 106 aa16.41■□□□□ 0.22
ECHDC3-205ENST00000496136 LRRC20Q8TCA0 184 aa16.41■□□□□ 0.22
ECHDC3-205ENST00000496136 FXYD5Q96DB9 178 aa16.41■□□□□ 0.22
ECHDC3-205ENST00000496136 HIST1H1EP10412 219 aaKnown RBP16.4■□□□□ 0.22
ECHDC3-205ENST00000496136 BLOC1S1P78537 153 aa16.4■□□□□ 0.22
ECHDC3-205ENST00000496136 RBPMS2Q6ZRY4 209 aaKnown RBP16.4■□□□□ 0.22
ECHDC3-205ENST00000496136 ZNF767PQ75MW2 155 aa16.4■□□□□ 0.22
ECHDC3-205ENST00000496136 TMPRSS5Q9H3S3 457 aa16.4■□□□□ 0.22
ECHDC3-205ENST00000496136 ZNF586Q9NXT0 402 aa16.4■□□□□ 0.22
ECHDC3-205ENST00000496136 TRAV1-1A0A0B4J248 108 aa16.39■□□□□ 0.21
ECHDC3-205ENST00000496136 A0A1B0GV50 99 aa16.39■□□□□ 0.21
ECHDC3-205ENST00000496136 IZUMO1RA6ND01 250 aa16.39■□□□□ 0.21
ECHDC3-205ENST00000496136 NBEAP1P0C6P0 100 aa16.39■□□□□ 0.21
ECHDC3-205ENST00000496136 GCHFRP30047 84 aa16.39■□□□□ 0.21
ECHDC3-205ENST00000496136 GBGT1Q8N5D6 347 aa16.39■□□□□ 0.21
ECHDC3-205ENST00000496136 PCNPQ8WW12 178 aaKnown RBP16.39■□□□□ 0.21
ECHDC3-205ENST00000496136 TSPAN4O14817 238 aa16.38■□□□□ 0.21
ECHDC3-205ENST00000496136 ATF4P18848 351 aaPredicted RBP16.38■□□□□ 0.21
ECHDC3-205ENST00000496136 UBE2L3P68036 154 aaKnown RBP16.38■□□□□ 0.21
ECHDC3-205ENST00000496136 MS4A6AQ9H2W1 248 aa16.38■□□□□ 0.21
ECHDC3-205ENST00000496136 NRN1Q9NPD7 142 aa16.38■□□□□ 0.21
ECHDC3-205ENST00000496136 TRAV25A0A0B4J276 109 aa16.38■□□□□ 0.21
ECHDC3-205ENST00000496136 H3BTX0 84 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms