RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 Q56UQ5 140 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 Q86TA4 180 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 EXOC3-AS1Q8N2X6 119 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 ITLN2Q8WWU7 325 aaPredicted RBP8.72□□□□□ -1.01
CMSS1-208ENST00000496116 GFRA4Q9GZZ7 299 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 C21orf62Q9NYP8 219 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 SOX21Q9Y651 276 aaPredicted RBP8.72□□□□□ -1.01
CMSS1-208ENST00000496116 TRBV6-1A0A0K0K1D8 114 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 HLA-DRB1P01911 266 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 GPX1P07203 203 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 IGLC2P0DOY2 106 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 FCGR2BP31994 310 aaPredicted RBP8.72□□□□□ -1.01
CMSS1-208ENST00000496116 SLAQ13239 276 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 GOLT1AQ6ZVE7 132 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 Q6ZWC4 215 aa8.72□□□□□ -1.01
CMSS1-208ENST00000496116 FAM231BA6NCW3 169 aa8.71□□□□□ -1.01
CMSS1-208ENST00000496116 COL8A1P27658 744 aa8.71□□□□□ -1.01
CMSS1-208ENST00000496116 NDPQ00604 133 aa8.71□□□□□ -1.01
CMSS1-208ENST00000496116 UNQ6494/PRO21346Q6UXR6 183 aa8.71□□□□□ -1.01
CMSS1-208ENST00000496116 PRNTQ86SH4 94 aa8.71□□□□□ -1.01
CMSS1-208ENST00000496116 TMEM75Q8N9X5 138 aa8.71□□□□□ -1.01
CMSS1-208ENST00000496116 ZMAT5Q9UDW3 170 aaKnown RBP8.71□□□□□ -1.01
CMSS1-208ENST00000496116 S4R3C0 116 aa8.71□□□□□ -1.01
CMSS1-208ENST00000496116 DCHS2Q6V1P9 2916 aa8.71□□□□□ -1.01
CMSS1-208ENST00000496116 HRNRQ86YZ3 2850 aaPredicted RBP8.71□□□□□ -1.01
CMSS1-208ENST00000496116 SPTBN4Q9H254 2564 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 SPTBN1Q01082 2364 aaKnown RBP8.71□□□□□ -1.02
CMSS1-208ENST00000496116 HIVEP3Q5T1R4 2406 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 TRAV8-1A0A0A6YYK1 113 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 AMTP48728 403 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 CAMPP49913 170 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 HBBP68871 147 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 PDE6HQ13956 83 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 TOMM20LQ6UXN7 152 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 LINC00322Q6ZN03 302 aaPredicted RBP8.71□□□□□ -1.02
CMSS1-208ENST00000496116 OR4B1Q8NGF8 309 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 TBX15Q96SF7 602 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 NDUFAF3Q9BU61 184 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 LPAR2Q9HBW0 351 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 ZFP30Q9Y2G7 519 aa8.71□□□□□ -1.02
CMSS1-208ENST00000496116 IGHV7-81A0A0B4J1V7 117 aa8.7□□□□□ -1.02
CMSS1-208ENST00000496116 A0A1B0GXF2 115 aa8.7□□□□□ -1.02
CMSS1-208ENST00000496116 IGLV2-11P01706 119 aa8.7□□□□□ -1.02
CMSS1-208ENST00000496116 S100A7P31151 101 aa8.7□□□□□ -1.02
CMSS1-208ENST00000496116 C1orf194Q5T5A4 169 aa8.7□□□□□ -1.02
CMSS1-208ENST00000496116 SIGLEC15Q6ZMC9 328 aa8.7□□□□□ -1.02
CMSS1-208ENST00000496116 TCF24Q7RTU0 167 aa8.7□□□□□ -1.02
CMSS1-208ENST00000496116 RCHY1Q96PM5 261 aa8.7□□□□□ -1.02
CMSS1-208ENST00000496116 BPESC1Q9GZL8 116 aa8.7□□□□□ -1.02
CMSS1-208ENST00000496116 AAMDCQ9H7C9 122 aa8.7□□□□□ -1.02
CMSS1-208ENST00000496116 POLR3KQ9Y2Y1 108 aaPredicted RBP8.7□□□□□ -1.02
CMSS1-208ENST00000496116 TACC2O95359 2948 aa8.7□□□□□ -1.02
CMSS1-208ENST00000496116 A0A1W2PS18 150 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 NPIPB6E9PJ23 425 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 MRPS12O15235 138 aaKnown RBP8.69□□□□□ -1.02
CMSS1-208ENST00000496116 ZNF324O75467 553 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-208ENST00000496116 OR2J3O76001 311 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 LBHQ53QV2 105 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-208ENST00000496116 RBPMS2Q6ZRY4 209 aaKnown RBP8.69□□□□□ -1.02
CMSS1-208ENST00000496116 CIARTQ8N365 385 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-208ENST00000496116 Q8N9W7 124 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 C18orf32Q8TCD1 76 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 ZNF414Q96IQ9 312 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 TXN2Q99757 166 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 F8W735 103 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-208ENST00000496116 NDUFB8O95169 186 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 PMCHP20382 165 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 GNLYP22749 145 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 UQCRFS1P47985 274 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 KLF5Q13887 457 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-208ENST00000496116 GDF5OSQ5U4N7 250 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 OR2D3Q8NGH3 330 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 C17orf77Q96MU5 243 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 NRN1Q9NPD7 142 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 WNK2Q9Y3S1 2297 aa8.69□□□□□ -1.02
CMSS1-208ENST00000496116 KIR2DL5BA0A0G2JN68 375 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 KIR2DL5BA0A0G2JPC4 375 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 SERTM2A0A1B0GWG4 89 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 VWC2LB2RUY7 222 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 RPL7P18124 248 aaKnown RBP8.68□□□□□ -1.02
CMSS1-208ENST00000496116 CD33P20138 364 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 CSN1S1P47710 185 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 LMO4P61968 165 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 PSG9Q00887 426 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 PSG3Q16557 428 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 TEX43Q6ZNM6 134 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 KIR2DL5AQ8N109 375 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 GTSF1Q8WW33 167 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 PGLYRP4Q96LB8 373 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 SSBP4Q9BWG4 385 aaPredicted RBP8.68□□□□□ -1.02
CMSS1-208ENST00000496116 FBXL7Q9UJT9 491 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 PSG8Q9UQ74 426 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 OR2T8A6NH00 312 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 DIRC3C9JPN6 131 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 EGR2P11161 476 aaPredicted RBP8.68□□□□□ -1.02
CMSS1-208ENST00000496116 SAA4P35542 130 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 VN1R17PQ8TDU5 208 aa8.68□□□□□ -1.02
CMSS1-208ENST00000496116 ALKBH7Q9BT30 221 aaPredicted RBP8.68□□□□□ -1.02
CMSS1-208ENST00000496116 C19orf84I3L1E1 186 aa8.67□□□□□ -1.02
CMSS1-208ENST00000496116 IGHV3-23P01764 117 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms