RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 UQCRHP07919 91 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 GZMBP10144 247 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 FGF6P10767 208 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 IL9P15248 144 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 RPS3P23396 243 aaKnown RBP eCLIP2.58□□□□□ -2
CCDC39-207ENST00000495817 PHBP35232 272 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 GNG2P59768 71 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 RPS20P60866 119 aaKnown RBP2.58□□□□□ -2
CCDC39-207ENST00000495817 MAXP61244 160 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 IAH1Q2TAA2 248 aaPredicted RBP2.58□□□□□ -2
CCDC39-207ENST00000495817 C1orf54Q8WWF1 131 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 TMEM203Q969S6 136 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 SLC35G5Q96KT7 338 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 TMEM147Q9BVK8 224 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 YIPF3Q9GZM5 350 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 ACER3Q9NUN7 267 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 UQCC1Q9NVA1 299 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 MINOS1-NBL1R4GNA1 71 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 COL11A1P12107 1806 aaPredicted RBP2.58□□□□□ -2
CCDC39-207ENST00000495817 DMXL1Q9Y485 3027 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 CACNA1AO00555 2505 aa2.58□□□□□ -2
CCDC39-207ENST00000495817 PIEZO1Q92508 2521 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 FAM92AA1XBS5 289 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 J3KT08 172 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 UBBP0CG47 229 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 SPI1P17947 270 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 SRIP30626 198 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 RPL35P42766 123 aaKnown RBP2.57□□□□□ -2
CCDC39-207ENST00000495817 RBP2P50120 134 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 NCALDP61601 193 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 SNRPD2P62316 118 aaKnown RBP2.57□□□□□ -2
CCDC39-207ENST00000495817 DEFB103AP81534 67 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 EMX2Q04743 252 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 KCNJ8Q15842 424 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 LTC4SQ16873 150 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 ZNF181Q2M3W8 571 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.57□□□□□ -2
CCDC39-207ENST00000495817 AKR1C8PQ5T2L2 129 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 KRTAP13-1Q8IUC0 172 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 DOHHQ9BU89 302 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 PBDC1Q9BVG4 233 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 SH3BGRL3Q9H299 93 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 SPANXA1Q9NS26 97 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 HSPB8Q9UJY1 196 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 DOCK4Q8N1I0 1966 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 TRPM6Q9BX84 2022 aa2.57□□□□□ -2
CCDC39-207ENST00000495817 MYO16Q9Y6X6 1858 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 TRAV36DV7A0A075B6V5 113 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 MEIKINA0A087WXM9 373 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 A0A096LPI6 279 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 IGHV3-15A0A0B4J1V0 119 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 TMEM235A6NFC5 223 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 UBE2L6O14933 153 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 IGHV1-69P01742 117 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 S100A8P05109 93 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 MPC1LP0DKB6 136 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 EMP1P54849 157 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 RHEBQ15382 184 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 DEFB128Q7Z7B8 93 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 EXOC3-AS1Q8N2X6 119 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 TSTD1Q8NFU3 115 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 OR11H6Q8NGC7 330 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 THEM6Q8WUY1 208 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 CANT1Q8WVQ1 401 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 ROPN1LQ96C74 230 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 LYSMD1Q96S90 227 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 SERPINI1Q99574 410 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 PRTFDC1Q9NRG1 225 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 CALML5Q9NZT1 146 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 SSR3Q9UNL2 185 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 CFAP47Q6ZTR5 3102 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 ANAPC1Q9H1A4 1944 aa2.56□□□□□ -2
CCDC39-207ENST00000495817 PRRC2BQ5JSZ5 2229 aaKnown RBP2.56□□□□□ -2
CCDC39-207ENST00000495817 TMED7-TICAM2A0A0A6YYA0 188 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 A0A1B0GV50 99 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 A0A1B0GX51 115 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 TMEM189A5PLL7 270 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 KNCNA6PVL3 124 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 GNG7O60262 68 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 APOMO95445 188 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 APOA2P02652 100 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 IFNA4P05014 189 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 SERPINE1P05121 402 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 HLA-DQB2P05538 268 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 MYH1P12882 1939 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 CSRP1P21291 193 aaKnown RBP2.55□□□□□ -2
CCDC39-207ENST00000495817 PLXNA3P51805 1871 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 AKR1D1P51857 326 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 POLR2HP52434 150 aaKnown RBP2.55□□□□□ -2
CCDC39-207ENST00000495817 RELAQ04206 551 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 PLCXD2Q0VAA5 305 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 BATFQ16520 125 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 RNASE10Q5GAN6 216 aaKnown RBP2.55□□□□□ -2
CCDC39-207ENST00000495817 IBA57Q5T440 356 aaKnown RBP2.55□□□□□ -2
CCDC39-207ENST00000495817 AGTRAPQ6RW13 159 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 SBSNQ6UWP8 590 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 C2orf91Q6ZV80 131 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 CNEP1R1Q8N9A8 125 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 GDPD1Q8N9F7 314 aa2.55□□□□□ -2
CCDC39-207ENST00000495817 SLC30A7Q8NEW0 376 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms