RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 PHYHIPLQ96FC7 376 aa14.72□□□□□ -0.05
ATG3-208ENST00000495756 RNF24Q9Y225 148 aa14.72□□□□□ -0.05
ATG3-208ENST00000495756 FUT9Q9Y231 359 aa14.72□□□□□ -0.05
ATG3-208ENST00000495756 MGAM2Q2M2H8 2515 aa14.71□□□□□ -0.05
ATG3-208ENST00000495756 TRAV5A0A0B4J249 113 aa14.71□□□□□ -0.05
ATG3-208ENST00000495756 UMAD1C9J7I0 102 aa14.71□□□□□ -0.05
ATG3-208ENST00000495756 IGLV1-51P01701 117 aa14.71□□□□□ -0.05
ATG3-208ENST00000495756 FAM122CQ6P4D5 195 aa14.71□□□□□ -0.05
ATG3-208ENST00000495756 A0A1W2PPV4 95 aa14.7□□□□□ -0.06
ATG3-208ENST00000495756 CDC34P49427 236 aaPredicted RBP14.69□□□□□ -0.06
ATG3-208ENST00000495756 CD300EQ496F6 205 aaPredicted RBP14.69□□□□□ -0.06
ATG3-208ENST00000495756 FAM90A2PQ658T7 463 aa14.69□□□□□ -0.06
ATG3-208ENST00000495756 TCF24Q7RTU0 167 aa14.69□□□□□ -0.06
ATG3-208ENST00000495756 HELTA6NFD8 242 aa14.69□□□□□ -0.06
ATG3-208ENST00000495756 EIF3GO75821 320 aaKnown RBP eCLIP14.69□□□□□ -0.06
ATG3-208ENST00000495756 CD5P06127 495 aa14.69□□□□□ -0.06
ATG3-208ENST00000495756 RPL7P18124 248 aaKnown RBP14.69□□□□□ -0.06
ATG3-208ENST00000495756 ALKAL2Q6UX46 152 aa14.69□□□□□ -0.06
ATG3-208ENST00000495756 SIGLEC15Q6ZMC9 328 aa14.69□□□□□ -0.06
ATG3-208ENST00000495756 FAM167A-AS1Q96KT0 104 aa14.69□□□□□ -0.06
ATG3-208ENST00000495756 GPR82Q96P67 336 aa14.69□□□□□ -0.06
ATG3-208ENST00000495756 SLC25A2Q9BXI2 301 aa14.69□□□□□ -0.06
ATG3-208ENST00000495756 ACTR3CQ9C0K3 210 aaPredicted RBP14.69□□□□□ -0.06
ATG3-208ENST00000495756 WIPF1O43516 503 aa14.68□□□□□ -0.06
ATG3-208ENST00000495756 FHITP49789 147 aa14.68□□□□□ -0.06
ATG3-208ENST00000495756 ZNF726P1Q15940 193 aa14.68□□□□□ -0.06
ATG3-208ENST00000495756 TMEM61Q8N0U2 210 aa14.68□□□□□ -0.06
ATG3-208ENST00000495756 RAB24Q969Q5 203 aa14.68□□□□□ -0.06
ATG3-208ENST00000495756 GPR61Q9BZJ8 451 aa14.68□□□□□ -0.06
ATG3-208ENST00000495756 GALR1P47211 349 aa14.67□□□□□ -0.06
ATG3-208ENST00000495756 SULT1A2P50226 295 aa14.67□□□□□ -0.06
ATG3-208ENST00000495756 RAB5CP51148 216 aa14.67□□□□□ -0.06
ATG3-208ENST00000495756 TAS2R45P59539 299 aa14.67□□□□□ -0.06
ATG3-208ENST00000495756 RPL11P62913 178 aaKnown RBP14.67□□□□□ -0.06
ATG3-208ENST00000495756 FAM74A1Q5RGS3 127 aa14.67□□□□□ -0.06
ATG3-208ENST00000495756 DPPA3Q6W0C5 159 aa14.67□□□□□ -0.06
ATG3-208ENST00000495756 RBPMS2Q6ZRY4 209 aaKnown RBP14.67□□□□□ -0.06
ATG3-208ENST00000495756 BPIFA4PQ86YQ2 179 aa14.67□□□□□ -0.06
ATG3-208ENST00000495756 OR2K2Q8NGT1 345 aa14.67□□□□□ -0.06
ATG3-208ENST00000495756 FAM213BQ8TBF2 198 aa14.67□□□□□ -0.06
ATG3-208ENST00000495756 NBEAL1Q6ZS30 2694 aa14.66□□□□□ -0.06
ATG3-208ENST00000495756 TRAV25A0A0B4J276 109 aa14.66□□□□□ -0.06
ATG3-208ENST00000495756 CTXND1A0A1B0GTU2 59 aa14.66□□□□□ -0.06
ATG3-208ENST00000495756 IZUMO1RA6ND01 250 aa14.66□□□□□ -0.06
ATG3-208ENST00000495756 MRPS12O15235 138 aaKnown RBP14.66□□□□□ -0.06
ATG3-208ENST00000495756 HMGB3O15347 200 aaKnown RBP14.66□□□□□ -0.06
ATG3-208ENST00000495756 GP9P14770 177 aa14.66□□□□□ -0.06
ATG3-208ENST00000495756 KHDC3LQ587J8 217 aa14.66□□□□□ -0.06
ATG3-208ENST00000495756 OXLD1Q5BKU9 147 aa14.66□□□□□ -0.06
ATG3-208ENST00000495756 TEX261Q6UWH6 196 aa14.66□□□□□ -0.06
ATG3-208ENST00000495756 SSX7Q7RTT5 188 aa14.66□□□□□ -0.06
ATG3-208ENST00000495756 TMEM14CQ9P0S9 112 aa14.66□□□□□ -0.06
ATG3-208ENST00000495756 SMAD5-AS1Q9Y6J3 95 aa14.66□□□□□ -0.06
ATG3-208ENST00000495756 IGKV3-7A0A075B6H7 116 aa14.65□□□□□ -0.06
ATG3-208ENST00000495756 TSPAN4O14817 238 aa14.65□□□□□ -0.06
ATG3-208ENST00000495756 STAG3L2P0CL84 134 aa14.65□□□□□ -0.06
ATG3-208ENST00000495756 STAG3L3P0CL85 134 aa14.65□□□□□ -0.06
ATG3-208ENST00000495756 STXBP6Q8NFX7 210 aa14.65□□□□□ -0.06
ATG3-208ENST00000495756 OR7C2O60412 319 aa14.64□□□□□ -0.07
ATG3-208ENST00000495756 IGLC2P0DOY2 106 aa14.64□□□□□ -0.07
ATG3-208ENST00000495756 PYYP10082 97 aa14.64□□□□□ -0.07
ATG3-208ENST00000495756 LCN12Q6JVE5 192 aa14.64□□□□□ -0.07
ATG3-208ENST00000495756 ZNF503Q96F45 646 aa14.64□□□□□ -0.07
ATG3-208ENST00000495756 NOTCH1P46531 2555 aa14.64□□□□□ -0.07
ATG3-208ENST00000495756 ZNF785A8K8V0 405 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 ATF4P18848 351 aaPredicted RBP14.63□□□□□ -0.07
ATG3-208ENST00000495756 PQLC2Q6ZP29 291 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 GBGT1Q8N5D6 347 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 ZNF680Q8NEM1 530 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 C17orf77Q96MU5 243 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 PAXXQ9BUH6 204 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 MS4A6AQ9H2W1 248 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 OR51M1Q9H341 326 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 NRN1Q9NPD7 142 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 ARL14EPLP0DKL9 152 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 LCN15Q6UWW0 184 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 RNF141Q8WVD5 230 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 SPAG8Q99932 426 aaPredicted RBP14.63□□□□□ -0.07
ATG3-208ENST00000495756 HRH4Q9H3N8 390 aa14.63□□□□□ -0.07
ATG3-208ENST00000495756 A0A087X0K7 114 aa14.62□□□□□ -0.07
ATG3-208ENST00000495756 MAP1LC3B2A6NCE7 125 aa14.62□□□□□ -0.07
ATG3-208ENST00000495756 H3BQ15 152 aa14.62□□□□□ -0.07
ATG3-208ENST00000495756 SNRPCP09234 159 aaKnown RBP14.62□□□□□ -0.07
ATG3-208ENST00000495756 OR10J4P0C629 311 aa14.62□□□□□ -0.07
ATG3-208ENST00000495756 HIST1H1EP10412 219 aaKnown RBP14.62□□□□□ -0.07
ATG3-208ENST00000495756 PAFAH1B2P68402 229 aa14.62□□□□□ -0.07
ATG3-208ENST00000495756 GUCA2BQ16661 112 aa14.62□□□□□ -0.07
ATG3-208ENST00000495756 MBD3L1Q8WWY6 194 aa14.62□□□□□ -0.07
ATG3-208ENST00000495756 FXYD5Q96DB9 178 aa14.62□□□□□ -0.07
ATG3-208ENST00000495756 MAP1LC3BQ9GZQ8 125 aa14.62□□□□□ -0.07
ATG3-208ENST00000495756 ZNF705EA8MWA4 302 aaPredicted RBP14.61□□□□□ -0.07
ATG3-208ENST00000495756 G3V4G9 280 aa14.61□□□□□ -0.07
ATG3-208ENST00000495756 DNASE2O00115 360 aaPredicted RBP14.61□□□□□ -0.07
ATG3-208ENST00000495756 CXorf1O96002 111 aa14.61□□□□□ -0.07
ATG3-208ENST00000495756 IFNA7P01567 189 aa14.61□□□□□ -0.07
ATG3-208ENST00000495756 H2AFB1P0C5Y9 115 aa14.61□□□□□ -0.07
ATG3-208ENST00000495756 TFPI2P48307 235 aa14.61□□□□□ -0.07
ATG3-208ENST00000495756 UBE2L3P68036 154 aaKnown RBP14.61□□□□□ -0.07
ATG3-208ENST00000495756 SAMD5Q5TGI4 173 aa14.61□□□□□ -0.07
ATG3-208ENST00000495756 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms