RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 AREGP15514 252 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 PVALBP20472 110 aaPredicted RBP4.77□□□□□ -1.65
VIM-207ENST00000495528 SNCAP37840 140 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 TPPP2P59282 170 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 KRTAP10-6P60371 365 aaPredicted RBP4.77□□□□□ -1.65
VIM-207ENST00000495528 PRCDQ00LT1 54 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 AARDQ4LEZ3 155 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 AKIRIN2Q53H80 203 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 SPANXN5Q5MJ07 72 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 SLC25A24Q6NUK1 477 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 IL34Q6ZMJ4 242 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 ZNF546Q86UE3 836 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 OR5B3Q8NH48 314 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 DTD1Q8TEA8 209 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 SMIM8Q96KF7 97 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 RAB40CQ96S21 281 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 PLEKHA3Q9HB20 300 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 ZNF355PQ9NSJ1 428 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 OR5AC2Q9NZP5 309 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 CACFD1Q9UGQ2 172 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 ALMS1Q8TCU4 4167 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 TRAV14DV4A0A0A6YYC5 116 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 IGLC7A0M8Q6 106 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 IZUMO1RA6ND01 250 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 E5RGE8 158 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 H3BP45 60 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 DEDDO75618 318 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 TMEM50AO95807 157 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 PRH1P02810 166 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 TRGV3P03979 118 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 DEFA4P12838 97 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 SUB1P53999 127 aaKnown RBP eCLIP4.76□□□□□ -1.655e-11■■■□□ 15.3
VIM-207ENST00000495528 WT1-ASQ06250 92 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 FGL1Q08830 312 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 KLF5Q13887 457 aaPredicted RBP4.76□□□□□ -1.65
VIM-207ENST00000495528 PRSS54Q6PEW0 395 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 LINC00322Q6ZN03 302 aaPredicted RBP4.76□□□□□ -1.65
VIM-207ENST00000495528 C19orf35Q6ZS72 473 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 TTC9CQ8N5M4 171 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 OR9G4Q8NGQ1 327 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 LINC00479Q96M42 142 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 CIB3Q96Q77 187 aaPredicted RBP4.76□□□□□ -1.65
VIM-207ENST00000495528 TUBA4BQ9H853 241 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 ZC4H2Q9NQZ6 224 aa4.76□□□□□ -1.65
VIM-207ENST00000495528 STRAPQ9Y3F4 350 aaKnown RBP4.76□□□□□ -1.65
VIM-207ENST00000495528 IGLV7-46A0A075B6I9 117 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 FXYD6-FXYD2A0A087WZ82 144 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 IGHV3-21A0A0B4J1V1 117 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 G3V3Q6 166 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 CST7O76096 145 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 IGHV3-48P01763 117 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 IFNA4P05014 189 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 METTL15P1P0C7V9 234 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 RNASE2P10153 161 aaKnown RBP4.75□□□□□ -1.65
VIM-207ENST00000495528 SLC25A4P12235 298 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 ZP3P21754 424 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 NUP62P37198 522 aaPredicted RBP4.75□□□□□ -1.65
VIM-207ENST00000495528 HTR2BP41595 481 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 CAV2P51636 162 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 AP2S1P53680 142 aaPredicted RBP4.75□□□□□ -1.65
VIM-207ENST00000495528 MFAP2P55001 183 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 XGP55808 180 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 SYNJ2BPP57105 145 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 TAS2R30P59541 319 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 RAB11AP62491 216 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 DEFA5Q01523 94 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 OPCMLQ14982 345 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 LBHQ53QV2 105 aaPredicted RBP4.75□□□□□ -1.65
VIM-207ENST00000495528 OR8G2PQ6IF36 304 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 KRTAP5-11Q6L8G4 156 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 Q6ZRP5 223 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 TCTE3Q8IZS6 198 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 ASB13Q8WXK3 278 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 C11orf1Q9H5F2 150 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 MBD2Q9UBB5 411 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 U3KQ87 197 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 HERC2O95714 4834 aa4.75□□□□□ -1.65
VIM-207ENST00000495528 A0A0G2JLM5 398 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 IGSF23A1L1A6 192 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 RBMY1BA6NDE4 496 aaKnown RBP4.74□□□□□ -1.65
VIM-207ENST00000495528 RBMY1EA6NEQ0 496 aaKnown RBP4.74□□□□□ -1.65
VIM-207ENST00000495528 OR2J3O76001 311 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 BRI3O95415 125 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 TRBV12-3P01733 135 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 C1QBP02746 253 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 CRYGCP07315 174 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 RBMY1DP0C7P1 496 aaKnown RBP4.74□□□□□ -1.65
VIM-207ENST00000495528 PET100P0DJ07 73 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 CTRB1P17538 263 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 RPL35AP18077 110 aaKnown RBP4.74□□□□□ -1.65
VIM-207ENST00000495528 NPY1RP25929 384 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 RPL12P30050 165 aaKnown RBP4.74□□□□□ -1.65
VIM-207ENST00000495528 P2RY1P47900 373 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 C2orf83Q53S99 150 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 CTRB2Q6GPI1 263 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 LCN12Q6JVE5 192 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 HSD17B13Q7Z5P4 300 aaPredicted RBP4.74□□□□□ -1.65
VIM-207ENST00000495528 GTSCR1Q86UQ5 136 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 DEFB125Q8N687 156 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms