RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 E9PLN8 166 aa4.95□□□□□ -1.62
PHC3-214ENST00000494943 NDUFC2O95298 119 aa4.95□□□□□ -1.62
PHC3-214ENST00000494943 VKORC1L1Q8N0U8 176 aa4.95□□□□□ -1.62
PHC3-214ENST00000494943 KIR2DL4Q99706 377 aa4.95□□□□□ -1.62
PHC3-214ENST00000494943 TIMM23O14925 209 aa4.95□□□□□ -1.62
PHC3-214ENST00000494943 IGLV2-8P01709 118 aa4.95□□□□□ -1.62
PHC3-214ENST00000494943 SRSF2Q01130 221 aaKnown RBP4.95□□□□□ -1.62
PHC3-214ENST00000494943 FOXF2Q12947 444 aa4.95□□□□□ -1.62
PHC3-214ENST00000494943 IL11RAQ14626 422 aa4.95□□□□□ -1.62
PHC3-214ENST00000494943 AMTNQ6UX39 209 aa4.95□□□□□ -1.62
PHC3-214ENST00000494943 OR13A1Q8NGR1 328 aa4.95□□□□□ -1.62
PHC3-214ENST00000494943 VKORC1Q9BQB6 163 aa4.95□□□□□ -1.62
PHC3-214ENST00000494943 CHD3Q12873 2000 aaKnown RBP4.94□□□□□ -1.62
PHC3-214ENST00000494943 TRAV40A0A0B4J280 105 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 FGF6P10767 208 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 RPL39P5Q59GN2 51 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 MDP1Q86V88 176 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 FGFBP3Q8TAT2 258 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 FAM57AQ8TBR7 257 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 FXYD5Q96DB9 178 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 C12orf49Q9H741 205 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 RNF7Q9UBF6 113 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 VPREB3Q9UKI3 123 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 A0A1B0GX51 115 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 RNASE2P10153 161 aaKnown RBP4.94□□□□□ -1.62
PHC3-214ENST00000494943 SRD5A1P18405 259 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 FOXC1Q12948 553 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 NEU4Q8WWR8 484 aaPredicted RBP4.94□□□□□ -1.62
PHC3-214ENST00000494943 C5orf63A6NC05 138 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 SH2D1AO60880 128 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 NDUFA7O95182 113 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 PLAUP00749 431 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 TMEM258P61165 79 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 LY6DQ14210 128 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 IGLV3-12A0A075B6K2 115 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 TRBV10-2A0A0K0K1G8 114 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 NDUFB3O43676 98 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 DUSP14O95147 198 aaKnown RBP4.94□□□□□ -1.62
PHC3-214ENST00000494943 TRIP6Q15654 476 aaKnown RBP4.94□□□□□ -1.62
PHC3-214ENST00000494943 SHISA2Q6UWI4 295 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 C16orf47Q6ZP98 133 aaPredicted RBP4.94□□□□□ -1.62
PHC3-214ENST00000494943 FAM168AQ92567 244 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 PRSS22Q9GZN4 317 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 DKK2Q9UBU2 259 aa4.94□□□□□ -1.62
PHC3-214ENST00000494943 CSDC2Q9Y534 153 aaKnown RBP4.94□□□□□ -1.62
PHC3-214ENST00000494943 C19orf71A6NCJ1 209 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 LINC00473A8K010 186 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 NPFFO15130 113 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 IGHV4-34P06331 123 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 MGPP08493 103 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 CCL3P10147 92 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 XGP55808 180 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 NUMA1Q14980 2115 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 C20orf204Q6ZNR8 217 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 WFDC3Q8IUB2 231 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 CRISPLD2Q9H0B8 497 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 SELENOKQ9Y6D0 94 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 CHCHD2Q9Y6H1 151 aaPredicted RBP4.93□□□□□ -1.62
PHC3-214ENST00000494943 U3KQK5 164 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 TNRC6AQ8NDV7 1962 aaKnown RBP4.93□□□□□ -1.62
PHC3-214ENST00000494943 MEOX1P50221 254 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 ZNF415Q09FC8 603 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 Q8TCH9 128 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 SRSF8Q9BRL6 282 aaKnown RBP4.93□□□□□ -1.62
PHC3-214ENST00000494943 CDX4O14627 284 aaPredicted RBP4.93□□□□□ -1.62
PHC3-214ENST00000494943 DNAL4O96015 105 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 SAA1P0DJI8 122 aaPredicted RBP4.93□□□□□ -1.62
PHC3-214ENST00000494943 FAM53AQ6NSI3 398 aaPredicted RBP4.93□□□□□ -1.62
PHC3-214ENST00000494943 TDHQ8IZJ6 230 aa4.93□□□□□ -1.62
PHC3-214ENST00000494943 NTN5Q8WTR8 489 aaPredicted RBP4.93□□□□□ -1.62
PHC3-214ENST00000494943 IGKV3D-15A0A087WSY6 115 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 EFNA2O43921 213 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 SAA2P0DJI9 122 aaPredicted RBP4.92□□□□□ -1.62
PHC3-214ENST00000494943 GLRXP35754 106 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 MRPL14Q6P1L8 145 aaKnown RBP4.92□□□□□ -1.62
PHC3-214ENST00000494943 CXorf67Q86X51 503 aaPredicted RBP4.92□□□□□ -1.62
PHC3-214ENST00000494943 TMEM167AQ8TBQ9 72 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 DUX5Q96PT3 197 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 FAM240AA0A1B0GVK7 77 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 P0DMU3 169 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 FAM231AP0DMU4 169 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 FAM231CP0DMU5 169 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 CFHR2P36980 270 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 BEX4Q9NWD9 120 aaPredicted RBP4.92□□□□□ -1.62
PHC3-214ENST00000494943 SCN5AQ14524 2016 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 TRPM6Q9BX84 2022 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 TRAV25A0A0B4J276 109 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 NCR2O95944 276 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 CFC1BP0CG36 223 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 CFC1P0CG37 223 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 ODF1Q14990 250 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 GDF5OSQ5U4N7 250 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 IGHV1-45A0A0A0MS14 117 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 INS-IGF2F8WCM5 200 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 AGFG2O95081 481 aa4.92□□□□□ -1.62
PHC3-214ENST00000494943 A0A0B4J2C4 111 aa4.91□□□□□ -1.62
PHC3-214ENST00000494943 CCDC179H3BU77 68 aa4.91□□□□□ -1.62
PHC3-214ENST00000494943 PPIFP30405 207 aaKnown RBP4.91□□□□□ -1.62
PHC3-214ENST00000494943 RNF182Q8N6D2 247 aa4.91□□□□□ -1.62
PHC3-214ENST00000494943 MRPL35Q9NZE8 188 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms