RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 WIPF2Q8TF74 440 aaPredicted RBP8.85□□□□□ -0.99
CHMP3-209ENST00000494623 KCNS1Q96KK3 526 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 RPP21Q9H633 154 aaKnown RBP8.85□□□□□ -0.99
CHMP3-209ENST00000494623 OTORQ9NRC9 128 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 MED13LQ71F56 2210 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 ODF3BA8MYP8 253 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 IL4P05112 153 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 RASL11AQ6T310 242 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 OR2D3Q8NGH3 330 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 PGLYRP4Q96LB8 373 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 ASCL2Q99929 193 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 TMEM14CQ9P0S9 112 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 SPTBN4Q9H254 2564 aa8.85□□□□□ -0.99
CHMP3-209ENST00000494623 SPTBN1Q01082 2364 aaKnown RBP8.84□□□□□ -0.99
CHMP3-209ENST00000494623 NDUFA3O95167 84 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 NTF3P20783 257 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 ZFP36P26651 326 aaKnown RBP8.84□□□□□ -0.99
CHMP3-209ENST00000494623 LY6DQ14210 128 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 ZNF491Q8N8L2 437 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 SMIM12Q96EX1 92 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 PAM16Q9Y3D7 125 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 A0A1W2PPR1 153 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 A8MWL6 223 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 GNG7O60262 68 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 Q71RC1 249 aaPredicted RBP8.84□□□□□ -0.99
CHMP3-209ENST00000494623 BPIFA4PQ86YQ2 179 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 BCL6BQ8N143 479 aaPredicted RBP8.84□□□□□ -0.99
CHMP3-209ENST00000494623 C18orf32Q8TCD1 76 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 GTSF1Q8WW33 167 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 SHANK2-AS3Q9BTD1 123 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 PRSS22Q9GZN4 317 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 SVEP1Q4LDE5 3571 aa8.84□□□□□ -0.99
CHMP3-209ENST00000494623 C19orf71A6NCJ1 209 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 ZNF324O75467 553 aaPredicted RBP8.83□□□□□ -1
CHMP3-209ENST00000494623 IGHV3-23P01764 117 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 COTL1Q14019 142 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 OR4F17Q8NGA8 305 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 RNF125Q96EQ8 232 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 TRBV19A0A075B6N1 114 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 KIR2DL5BA0A0G2JN68 375 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 KIR2DL5BA0A0G2JPC4 375 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 TMEM11P17152 192 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 ZNF705AQ6ZN79 300 aaPredicted RBP8.83□□□□□ -1
CHMP3-209ENST00000494623 TEX43Q6ZNM6 134 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 KIR2DL5AQ8N109 375 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 FANCD2OSQ96PS1 177 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 WNK2Q9Y3S1 2297 aa8.83□□□□□ -1
CHMP3-209ENST00000494623 DIRC3C9JPN6 131 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 H3BRN7 92 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 COL8A1P27658 744 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 Q56UQ5 140 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 ZNF562Q6V9R5 426 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 Q86TA4 180 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 ARPC1AQ92747 370 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 ASH1LQ9NR48 2969 aaKnown RBP8.82□□□□□ -1
CHMP3-209ENST00000494623 EREGO14944 169 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 IGLV2-11P01706 119 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 NDPQ00604 133 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 ALKBH7Q9BT30 221 aaPredicted RBP8.82□□□□□ -1
CHMP3-209ENST00000494623 VAMP8Q9BV40 100 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 UBTD1Q9HAC8 227 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 ZNF492Q9P255 531 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 A0A1B0GXF2 115 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 MFAP4P55083 255 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 HBBP68871 147 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 CCDC144NLQ6NUI1 221 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 ATP5L2Q7Z4Y8 100 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 NIT1Q86X76 327 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 C2orf88Q9BSF0 95 aa8.82□□□□□ -1
CHMP3-209ENST00000494623 IGLV11-55A0A075B6I3 123 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 HLA-DRB1P01911 266 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 IGLC2P0DOY2 106 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 DTX2Q86UW9 622 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 BORCS7Q96B45 105 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 TRAV30A0A087WSZ9 112 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 WI2-2373I1.2A0A1W2PRP0 233 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 HSBP1O75506 76 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 OR2J3O76001 311 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 NDUFB8O95169 186 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 HOXB4P17483 251 aaPredicted RBP8.81□□□□□ -1
CHMP3-209ENST00000494623 FOXA3P55318 350 aaPredicted RBP8.81□□□□□ -1
CHMP3-209ENST00000494623 RNASEKQ6P5S7 137 aaKnown RBP8.81□□□□□ -1
CHMP3-209ENST00000494623 C1orf122Q6ZSJ8 110 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 Q8N976 141 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 SNHG12Q9BXW3 62 aa8.81□□□□□ -1
CHMP3-209ENST00000494623 CHD8Q9HCK8 2581 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 NPIPB5A8MRT5 1133 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 M0R3E3 92 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 C3orf79P0CE67 100 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 LBHQ53QV2 105 aaPredicted RBP8.8□□□□□ -1
CHMP3-209ENST00000494623 CT83Q5H943 113 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 SIGLEC15Q6ZMC9 328 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 TTC9CQ8N5M4 171 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 ZNF414Q96IQ9 312 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 C21orf62Q9NYP8 219 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 RNF24Q9Y225 148 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 NCOR2Q9Y618 2525 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 OR2T8A6NH00 312 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 KLF5Q13887 457 aaPredicted RBP8.8□□□□□ -1
CHMP3-209ENST00000494623 FAM120AOSQ5T036 256 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms