RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SLC25A38Q96DW6 304 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 GINS3Q9BRX5 216 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 NDUFAF3Q9BU61 184 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 DIABLOQ9NR28 239 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 BATF3Q9NR55 127 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 XCL2Q9UBD3 114 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 SSR3Q9UNL2 185 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 PKHD1P08F94 4074 aa3.65□□□□□ -1.82
PTCD3-219ENST00000494323 IGHV3-38A0A0C4DH36 116 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 LOC100506127A0A0U1RQW1 187 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 ZNF705EA8MWA4 302 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-219ENST00000494323 GPR31O00270 319 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 IFNA10P01566 189 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 IGKV1-39P01597 117 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 IGKV1D-39P04432 117 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 NPY1RP25929 384 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 HLA-DMAP28067 261 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 SNCAP37840 140 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 ETV6P41212 452 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 P2RY1P47900 373 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 HSPE1P61604 102 aaKnown RBP3.65□□□□□ -1.83
PTCD3-219ENST00000494323 ERHP84090 104 aaKnown RBP3.65□□□□□ -1.83
PTCD3-219ENST00000494323 DHRS2Q13268 280 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 LGALS9BQ3B8N2 356 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 MORN3Q6PF18 240 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-219ENST00000494323 GSG1LQ6UXU4 331 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 ZNF600Q6ZNG1 722 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 H2BFWTQ7Z2G1 175 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 CMTM1Q8IZ96 169 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 OR5H2Q8NGV7 314 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 OR6F1Q8NGZ6 308 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 DCANP1Q8TF63 244 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 TMEM230Q96A57 120 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 S100A16Q96FQ6 103 aaKnown RBP3.65□□□□□ -1.83
PTCD3-219ENST00000494323 SEC22AQ96IW7 307 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 OPRPNQ99935 248 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-219ENST00000494323 IFT46Q9NQC8 304 aa3.65□□□□□ -1.83
PTCD3-219ENST00000494323 MRPL36Q9P0J6 103 aaKnown RBP3.65□□□□□ -1.83
PTCD3-219ENST00000494323 DNAH6Q9C0G6 4158 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 IGHV3OR16-12A0A075B7B8 117 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 TRAV2A0A0B4J234 112 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 RNF222A6NCQ9 220 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 TNFAIP8O95379 198 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 HTN3P15516 51 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 CRYBB3P26998 211 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 HRH1P35367 487 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 TGFBR1P36897 503 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 CBX5P45973 191 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 FXYD7P58549 80 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 DEFB1P60022 68 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 TSPAN5P62079 268 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 PRCDQ00LT1 54 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 DHODHQ02127 395 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 TIGITQ495A1 244 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 TMEM41BQ5BJD5 291 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 PSMG4Q5JS54 123 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 Q6ZR54 194 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 UBE2DNLQ8IWF7 75 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 ARL6IP6Q8N6S5 226 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 OR10G7Q8NGN6 311 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 BORCS5Q969J3 196 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 MRGPRFQ96AM1 343 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 METTL26Q96S19 204 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 TSC22D3Q99576 134 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 NACAE9PAV3 2078 aa3.64□□□□□ -1.83
PTCD3-219ENST00000494323 DNAH2Q9P225 4427 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 FAT2Q9NYQ8 4349 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 ABCA13Q86UQ4 5058 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 IGLV7-46A0A075B6I9 117 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 A0A0A6YYH2 397 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 HELTA6NFD8 242 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 A6NJ64 397 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 IGKV1-17P01599 117 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 SPART-AS1P0CW21 52 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 RNASE2P10153 161 aaKnown RBP3.63□□□□□ -1.83
PTCD3-219ENST00000494323 PRSS3P35030 304 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 TAS2R20P59543 309 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 TMEM69Q5SWH9 247 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 C1orf134Q5TEV5 83 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 ZC2HC1BQ5TFG8 222 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 STEAP1BQ6NZ63 245 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 SAMD12Q8N8I0 201 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 TMEM37Q8WXS4 190 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 YTHDF1Q9BYJ9 559 aaKnown RBP3.63□□□□□ -1.83
PTCD3-219ENST00000494323 FXYD6Q9H0Q3 95 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 DNAH17Q9UFH2 4485 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 PKD1P98161 4303 aa3.63□□□□□ -1.83
PTCD3-219ENST00000494323 C16orf90A8MZG2 172 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 H3BMM0 161 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 SCGB2A1O75556 95 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 IGKV1-5P01602 117 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 CD74P04233 296 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 PRM2P04554 102 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 PGAM2P15259 253 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 S100GP29377 79 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 OPRK1P41145 380 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 AP2S1P53680 142 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-219ENST00000494323 SUB1P53999 127 aaKnown RBP eCLIP3.62□□□□□ -1.83
PTCD3-219ENST00000494323 TAS2R46P59540 309 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms