RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 RUNX1Q01196 453 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 ZNF791Q3KP31 576 aaPredicted RBP2.72□□□□□ -1.97
SMC2-205ENST00000493955 OR6V1Q8N148 313 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 DYNAPQ8N1N2 210 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 RPP25LQ8N5L8 163 aaKnown RBP2.72□□□□□ -1.97
SMC2-205ENST00000493955 TMEM147Q9BVK8 224 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 VCX3BQ9H321 246 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 CEP295Q9C0D2 2601 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 SCN8AQ9UQD0 1980 aa2.71□□□□□ -1.97
SMC2-205ENST00000493955 URB1O60287 2271 aaKnown RBP2.71□□□□□ -1.98
SMC2-205ENST00000493955 GCN1Q92616 2671 aaKnown RBP2.71□□□□□ -1.98
SMC2-205ENST00000493955 IGSF10Q6WRI0 2623 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 FABP5P3A8MUU1 101 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 J3QQQ9 107 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 IGHV3-7P01780 117 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 APODP05090 189 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 MSMBP08118 114 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 EVX1P49640 407 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 RPL26P61254 145 aaKnown RBP2.71□□□□□ -1.98
SMC2-205ENST00000493955 IBA57Q5T440 356 aaKnown RBP2.71□□□□□ -1.98
SMC2-205ENST00000493955 C9orf64Q5T6V5 341 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 AADACL3Q5VUY0 350 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 RPL22L1Q6P5R6 122 aaKnown RBP2.71□□□□□ -1.98
SMC2-205ENST00000493955 BTF3L4Q96K17 158 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 SIGMAR1Q99720 223 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 DERL1Q9BUN8 251 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 C11orf68Q9H3H3 251 aaKnown RBP2.71□□□□□ -1.98
SMC2-205ENST00000493955 IDI2-AS1Q9NZ38 188 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 RPL26L1Q9UNX3 145 aaKnown RBP2.71□□□□□ -1.98
SMC2-205ENST00000493955 DSPP15924 2871 aaKnown RBP2.71□□□□□ -1.98
SMC2-205ENST00000493955 ACACAQ13085 2346 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 PTPRQQ9UMZ3 2332 aa2.71□□□□□ -1.98
SMC2-205ENST00000493955 SMG1Q96Q15 3661 aaKnown RBP2.7□□□□□ -1.98
SMC2-205ENST00000493955 IGHV1-18A0A0C4DH31 117 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 hADV38S2A0JD32 116 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 IRGMA1A4Y4 181 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 HLA-EP13747 358 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 HIST1H2BOP23527 126 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 HIST1H2BBP33778 126 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 HIST1H2BDP58876 126 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 TMEM258P61165 79 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 HIST1H2BCP62807 126 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 TFAMQ00059 246 aaKnown RBP2.7□□□□□ -1.98
SMC2-205ENST00000493955 GLO1Q04760 184 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 HIST2H2BEQ16778 126 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.7□□□□□ -1.98
SMC2-205ENST00000493955 OR13C4Q8NGS5 318 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 CDC26Q8NHZ8 85 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 HIST1H2BHQ93079 126 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 HIST1H2BNQ99877 126 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 HIST1H2BMQ99879 126 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 CHST6Q9GZX3 395 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 C14orf105Q9NVL8 296 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 ZFC3H1O60293 1989 aaKnown RBP2.7□□□□□ -1.98
SMC2-205ENST00000493955 ANKRD36A6QL64 1941 aa2.7□□□□□ -1.98
SMC2-205ENST00000493955 SETXQ7Z333 2677 aaKnown RBP2.7□□□□□ -1.98
SMC2-205ENST00000493955 LAMA5O15230 3695 aa2.69□□□□□ -1.98
SMC2-205ENST00000493955 IGLV3-9A0A075B6K5 115 aa2.69□□□□□ -1.98
SMC2-205ENST00000493955 IGKV1D-43A0A0B4J1Z2 117 aa2.69□□□□□ -1.98
SMC2-205ENST00000493955 EXOC1LA0A1B0GW35 172 aa2.69□□□□□ -1.98
SMC2-205ENST00000493955 PDE6DO43924 150 aa2.69□□□□□ -1.98
SMC2-205ENST00000493955 DEFA4P12838 97 aa2.69□□□□□ -1.98
SMC2-205ENST00000493955 KRTAP13-1Q8IUC0 172 aa2.69□□□□□ -1.98
SMC2-205ENST00000493955 WFDC5Q8TCV5 224 aa2.69□□□□□ -1.98
SMC2-205ENST00000493955 CT55Q8WUE5 264 aa2.69□□□□□ -1.98
SMC2-205ENST00000493955 TOMM6Q96B49 74 aa2.69□□□□□ -1.98
SMC2-205ENST00000493955 NMNAT1Q9HAN9 279 aaPredicted RBP2.69□□□□□ -1.98
SMC2-205ENST00000493955 ASXL3Q9C0F0 2248 aa2.69□□□□□ -1.98
SMC2-205ENST00000493955 ASH1LQ9NR48 2969 aaKnown RBP2.69□□□□□ -1.98
SMC2-205ENST00000493955 ANKRD11Q6UB99 2663 aaPredicted RBP2.69□□□□□ -1.98
SMC2-205ENST00000493955 TENM4Q6N022 2769 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 TRAV9-1A0A075B6T8 112 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 DPRXA6NFQ7 191 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 SLC22A1O15245 554 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 OR7C1O76099 320 aaPredicted RBP2.68□□□□□ -1.98
SMC2-205ENST00000493955 SERPINA1P01009 418 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 IGKV1-5P01602 117 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 PPBPP02775 128 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 CASP1P29466 404 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 ARF6P62330 175 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 TPRXLQ17RH7 258 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 FAM173BQ6P4H8 233 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 ZNF720Q7Z2F6 126 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 TMEM86AQ8N2M4 240 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 Q8NDZ9 215 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 OR51A2Q8NGJ7 313 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 MCFD2Q8NI22 146 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 PAIP2Q9BPZ3 127 aaKnown RBP2.68□□□□□ -1.98
SMC2-205ENST00000493955 DOHHQ9BU89 302 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 KIFC1Q9BW19 673 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 C20orf27Q9GZN8 174 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 RNASE7Q9H1E1 156 aaKnown RBP2.68□□□□□ -1.98
SMC2-205ENST00000493955 TMEM106BQ9NUM4 274 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 SAMHD1Q9Y3Z3 626 aaKnown RBP2.68□□□□□ -1.98
SMC2-205ENST00000493955 KNL1Q8NG31 2342 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 MDC1Q14676 2089 aaKnown RBP2.68□□□□□ -1.98
SMC2-205ENST00000493955 RP1P56715 2156 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 COL6A6A6NMZ7 2263 aa2.68□□□□□ -1.98
SMC2-205ENST00000493955 ZNF106Q9H2Y7 1883 aaKnown RBP2.68□□□□□ -1.98
SMC2-205ENST00000493955 FAM92AA1XBS5 289 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms