RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 RABAC1Q9UI14 185 aa8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 USP24Q9UPU5 2620 aa8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 SERTM2A0A1B0GWG4 89 aa8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 BMPR1BO00238 502 aa8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 PRB1P04280 392 aa8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 SNRPCP09234 159 aaKnown RBP8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 Q86TA4 180 aa8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 NUDT10Q8NFP7 164 aa8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 EEF1AKMT3Q96AZ1 226 aa8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 NUDT11Q96G61 164 aa8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 ZNF414Q96IQ9 312 aa8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 MED13LQ71F56 2210 aa8.43□□□□□ -1.06
PHACTR4-204ENST00000493669 TACC2O95359 2948 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 CACNA1BQ00975 2339 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 TRBV7-1A0A0A6YYK4 115 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 M0QZK8 103 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 PSG9Q00887 426 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 C19orf54Q5BKX5 351 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 HIST1H2BLQ99880 126 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 MRPL18Q9H0U6 180 aaKnown RBP8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 RPH3ALQ9UNE2 315 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 H3BTX0 84 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 ZNF253O75346 499 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 BRI3O95415 125 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 AMY1AP04745 511 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 ADMP35318 185 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 OR10D4PQ8NGN7 298 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 WIPF2Q8TF74 440 aaPredicted RBP8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 TSKUQ8WUA8 353 aa8.42□□□□□ -1.06
PHACTR4-204ENST00000493669 FAM223BA6NKX1 122 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 HLA-DQA1P01909 254 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 FABP4P15090 132 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 CBLN1P23435 193 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 IER3P46695 156 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 FAM223AQ8IWN6 122 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 EXOC3-AS1Q8N2X6 119 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 AAMDCQ9H7C9 122 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 NAT8BQ9UHF3 227 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 ZFP30Q9Y2G7 519 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 USP9XQ93008 2570 aaPredicted RBP8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 SNURFLB1AK76 121 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 IGHV4-38-2P0DP08 117 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 BRD3OSQ6XYD6 125 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 PACRGQ96M98 296 aaPredicted RBP8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 PRSS22Q9GZN4 317 aa8.41□□□□□ -1.06
PHACTR4-204ENST00000493669 IGHV3OR16-10A0A075B7F0 116 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 TRAV41A0A0B4J266 112 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 C19orf71A6NCJ1 209 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 FBLL1A6NHQ2 334 aaKnown RBP8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 H3BUA1 57 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 IGLV2-11P01706 119 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 IGHV3-23P01764 117 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 IGF1P05019 195 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 PDZD11Q5EBL8 140 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 GOLT1AQ6ZVE7 132 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 ATP5L2Q7Z4Y8 100 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 OR4B1Q8NGF8 309 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 RPP21Q9H633 154 aaKnown RBP8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 NIT2Q9NQR4 276 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 SPTAN1Q13813 2472 aaKnown RBP8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 FAM231BA6NCW3 169 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 A6NDX4 124 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 G3V318 75 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 GPR183P32249 361 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 PRR27Q6MZM9 219 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 TMEM136Q6ZRR5 245 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 TMEM219Q86XT9 240 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 GFRA4Q9GZZ7 299 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 HIF1ANQ9NWT6 349 aa8.4□□□□□ -1.06
PHACTR4-204ENST00000493669 J3QLI3 93 aa8.4□□□□□ -1.07
PHACTR4-204ENST00000493669 AMBPP02760 352 aa8.4□□□□□ -1.07
PHACTR4-204ENST00000493669 PYY3Q5JQD4 70 aa8.4□□□□□ -1.07
PHACTR4-204ENST00000493669 LINC01356Q8N9X3 169 aa8.4□□□□□ -1.07
PHACTR4-204ENST00000493669 TMEM18Q96B42 140 aa8.4□□□□□ -1.07
PHACTR4-204ENST00000493669 ZFAND3Q9H8U3 227 aa8.4□□□□□ -1.07
PHACTR4-204ENST00000493669 SOX21Q9Y651 276 aaPredicted RBP8.4□□□□□ -1.07
PHACTR4-204ENST00000493669 A8MWL6 223 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 DIRC3C9JPN6 131 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 NPIPB6E9PJ23 425 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 P01737 135 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 TCL1AP56279 114 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 RELQ04864 619 aaPredicted RBP8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 ATP5G2Q06055 141 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 DAZAP1Q96EP5 407 aaKnown RBP8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 CCDC140Q96MF4 163 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 ZNF331Q9NQX6 463 aaPredicted RBP8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 LINC01548A6NM66 108 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 CLEC3BP05452 202 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 CSN1S1P47710 185 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 SRSF1Q07955 248 aaKnown RBP eCLIP8.39□□□□□ -1.072e-9■□□□□ 9.9
PHACTR4-204ENST00000493669 Q0VG73 95 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 PSG3Q16557 428 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 TOMM20LQ6UXN7 152 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 GBGT1Q8N5D6 347 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 C17orf77Q96MU5 243 aa8.39□□□□□ -1.07
PHACTR4-204ENST00000493669 A0A087X0K7 114 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 IGHG2P01859 326 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 CRISP2P16562 243 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 C1orf194Q5T5A4 169 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms