RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PRR30Q53SZ7 412 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-205ENST00000493587 ZFP2Q6ZN57 461 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 MMABQ96EY8 250 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-205ENST00000493587 LYZL4Q96KX0 146 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 LINC01587Q99440 93 aa5.55□□□□□ -1.52
VPS13B-205ENST00000493587 IGKV2D-26A0A0A0MRZ7 120 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 IFI27P40305 119 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-205ENST00000493587 CXCL12P48061 93 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 ZC2HC1BQ5TFG8 222 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 DEFB119Q8N690 84 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 FGFBP3Q8TAT2 258 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 FAM57AQ8TBR7 257 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 MRPL32Q9BYC8 188 aaKnown RBP5.54□□□□□ -1.52
VPS13B-205ENST00000493587 HIGD1BQ9P298 99 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 AMMECR1Q9Y4X0 333 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-205ENST00000493587 V9GYY9 64 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 PRR14LQ5THK1 2151 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 TINCRA0A1B0GVN0 87 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 C16orf97H3BN30 126 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 CDX4O14627 284 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-205ENST00000493587 TM4SF5O14894 197 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 RPL35AP18077 110 aaKnown RBP5.54□□□□□ -1.52
VPS13B-205ENST00000493587 NXPH1P58417 271 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 DEFB110Q30KQ9 67 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 RPRMLQ8N4K4 120 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 GJC3Q8NFK1 279 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 RNF125Q96EQ8 232 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 IGKV1-12A0A0C4DH73 117 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 WISP1O95388 367 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 IGKV1D-12P01611 117 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 SRYQ05066 204 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 PEAR1Q5VY43 1037 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-205ENST00000493587 TREML4Q6UXN2 200 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 SCGB1D4Q6XE38 83 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 OR9G1Q8NH87 305 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 NTN5Q8WTR8 489 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-205ENST00000493587 SPTSSAQ969W0 71 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 MGST2Q99735 147 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 TMEM133Q9H2Q1 129 aa5.54□□□□□ -1.52
VPS13B-205ENST00000493587 DUSP14O95147 198 aaKnown RBP5.53□□□□□ -1.52
VPS13B-205ENST00000493587 HBDP02042 147 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 ORM1P02763 201 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 IGKV3-11P04433 115 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 SLC25A45Q8N413 288 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 ST8SIA1Q92185 356 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 MDFICQ9P1T7 246 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 NCBP2LA6PVI3 153 aaKnown RBP5.53□□□□□ -1.52
VPS13B-205ENST00000493587 H7C2G1 150 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 SPINK2P20155 84 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 HERVK_113P61574 105 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 TMEM219Q86XT9 240 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 MKXQ8IYA7 352 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 RPP21Q9H633 154 aaKnown RBP5.53□□□□□ -1.52
VPS13B-205ENST00000493587 IGKV1-27A0A075B6S5 117 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 SYNGR3O43761 229 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 SLC25A20O43772 301 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 ZFAND5O76080 213 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 CECR9P0C854 216 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 CCL1P22362 96 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 Q6Q795 121 aa5.53□□□□□ -1.52
VPS13B-205ENST00000493587 CELSR3Q9NYQ7 3312 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 IGHV5-51A0A0C4DH38 117 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 IGKV1-6A0A0C4DH72 117 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 LILRA5A6NI73 299 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 C15orf62A8K5M9 175 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 MS4A18H0YCH9 400 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 IGLV2-8P01709 118 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 MS4A18Q3C1V0 323 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 Q6ZPA2 131 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 FOXC2Q99958 501 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 CALYQ9NYX4 217 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 RBAKDNA6NC62 111 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 IGKCP01834 107 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 GFERP55789 205 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 LOXL1Q08397 574 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-205ENST00000493587 Q1RN00 199 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 TRPT1Q86TN4 253 aaKnown RBP5.52□□□□□ -1.53
VPS13B-205ENST00000493587 CACNA1EQ15878 2313 aa5.52□□□□□ -1.53
VPS13B-205ENST00000493587 MYMXA0A1B0GTQ4 84 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 LMO7DNF2Z398 122 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 MOB3BQ86TA1 216 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 ABHD12Q8N2K0 398 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 C3orf22Q8N5N4 141 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 RTL8AQ9BWD3 113 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 ZGRF1Q86YA3 2104 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 TRGV11A0A075B6L2 103 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 PMS2P5A8MQ11 134 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 CRIP3Q6Q6R5 217 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 OR11H6Q8NGC7 330 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 PRNDQ9UKY0 176 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 ASXL3Q9C0F0 2248 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 NPIPB11E5RHQ5 1161 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 PEX7O00628 323 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 RIGQ13278 110 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 TWIST1Q15672 202 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 Q6ZS92 163 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 DRAM1Q8N682 238 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 NABP1Q96AH0 204 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 FRYQ5TBA9 3013 aa5.51□□□□□ -1.53
VPS13B-205ENST00000493587 IGLV3-12A0A075B6K2 115 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms