RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 SULT1A1P50225 295 aa6.89□□□□□ -1.31
SGIP1-213ENST00000493564 H2BFSP57053 126 aa6.89□□□□□ -1.31
SGIP1-213ENST00000493564 NHLH2Q02577 135 aa6.89□□□□□ -1.31
SGIP1-213ENST00000493564 PMS2P11Q13670 270 aa6.89□□□□□ -1.31
SGIP1-213ENST00000493564 MIC13Q5XKP0 118 aa6.89□□□□□ -1.31
SGIP1-213ENST00000493564 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.89□□□□□ -1.31
SGIP1-213ENST00000493564 IL17DQ8TAD2 202 aa6.89□□□□□ -1.31
SGIP1-213ENST00000493564 SHANK2-AS3Q9BTD1 123 aa6.89□□□□□ -1.31
SGIP1-213ENST00000493564 GGACTQ9BVM4 153 aa6.89□□□□□ -1.31
SGIP1-213ENST00000493564 ARV1Q9H2C2 271 aa6.89□□□□□ -1.31
SGIP1-213ENST00000493564 UQCC1Q9NVA1 299 aa6.89□□□□□ -1.31
SGIP1-213ENST00000493564 OR5AC2Q9NZP5 309 aa6.89□□□□□ -1.31
SGIP1-213ENST00000493564 UBE2L5PA0A1B0GUS4 154 aa6.88□□□□□ -1.31
SGIP1-213ENST00000493564 RLN2P04090 185 aa6.88□□□□□ -1.31
SGIP1-213ENST00000493564 S100A11P31949 105 aa6.88□□□□□ -1.31
SGIP1-213ENST00000493564 CAMLGP49069 296 aa6.88□□□□□ -1.31
SGIP1-213ENST00000493564 PLP1P60201 277 aa6.88□□□□□ -1.31
SGIP1-213ENST00000493564 STX12Q86Y82 276 aa6.88□□□□□ -1.31
SGIP1-213ENST00000493564 RNF182Q8N6D2 247 aa6.88□□□□□ -1.31
SGIP1-213ENST00000493564 OR4B1Q8NGF8 309 aa6.88□□□□□ -1.31
SGIP1-213ENST00000493564 GATAD1Q8WUU5 269 aa6.88□□□□□ -1.31
SGIP1-213ENST00000493564 NMES1Q9C002 83 aa6.88□□□□□ -1.31
SGIP1-213ENST00000493564 SEPSECSQ9HD40 501 aaKnown RBP6.88□□□□□ -1.31
SGIP1-213ENST00000493564 XCL2Q9UBD3 114 aa6.88□□□□□ -1.31
SGIP1-213ENST00000493564 DYNC2H1Q8NCM8 4307 aaKnown RBP6.87□□□□□ -1.31
SGIP1-213ENST00000493564 TRAV8-2A0A0B4J237 113 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 TRAV5A0A0B4J249 113 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 CXorf65A6NEN9 183 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 E5RGE8 158 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 H3BTX0 84 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 ISLRO14498 428 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 COX7A2P2O60397 106 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 ZNF705DP0CH99 300 aaPredicted RBP6.87□□□□□ -1.31
SGIP1-213ENST00000493564 ZNF705BP0CI00 300 aaPredicted RBP6.87□□□□□ -1.31
SGIP1-213ENST00000493564 SPP1P10451 314 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 ATF4P18848 351 aaPredicted RBP6.87□□□□□ -1.31
SGIP1-213ENST00000493564 FGF7P21781 194 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 HLA-DMBP28068 263 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 S100A7P31151 101 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 PSMB3P49720 205 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 HBG1P69891 147 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 HBG2P69892 147 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 BAXQ07812 192 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 RAB31Q13636 194 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 MORN5Q5VZ52 161 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 MORN3Q6PF18 240 aaPredicted RBP6.87□□□□□ -1.31
SGIP1-213ENST00000493564 LINC00305Q7Z4B0 112 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 ZNF546Q86UE3 836 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 PPP1R1CQ8WVI7 109 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 TMEM37Q8WXS4 190 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 SAV1Q9H4B6 383 aaPredicted RBP6.87□□□□□ -1.31
SGIP1-213ENST00000493564 DNAJC4Q9NNZ3 241 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 WDR83OSQ9Y284 106 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 ALG5Q9Y673 324 aa6.87□□□□□ -1.31
SGIP1-213ENST00000493564 LYSTQ99698 3801 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 HLA-DRB4P13762 266 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 RPL7P18124 248 aaKnown RBP6.86□□□□□ -1.31
SGIP1-213ENST00000493564 NANOS2P60321 138 aaKnown RBP6.86□□□□□ -1.31
SGIP1-213ENST00000493564 CYCSP99999 105 aaKnown RBP6.86□□□□□ -1.31
SGIP1-213ENST00000493564 CLINT1Q14677 625 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 VWC2Q2TAL6 325 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 FAM78BQ5VT40 261 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 C10orf113Q5VZT2 155 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 EBLN2Q6P2I7 272 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 FOXI2Q6ZQN5 318 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 Q6ZRG5 221 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 CSNK1G2-AS1Q8NCQ2 148 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 OR5C1Q8NGR4 320 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 THAP6Q8TBB0 222 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 LRRC20Q8TCA0 184 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 GPR82Q96P67 336 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 RNF126Q9BV68 326 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 SLC35B3Q9H1N7 401 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 RPRMQ9NS64 109 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 HLA-DRB4X5D2U9 266 aa6.86□□□□□ -1.31
SGIP1-213ENST00000493564 IGHV3OR16-12A0A075B7B8 117 aa6.85□□□□□ -1.31
SGIP1-213ENST00000493564 A0A0J9YX75 114 aa6.85□□□□□ -1.31
SGIP1-213ENST00000493564 MPC2O95563 127 aa6.85□□□□□ -1.31
SGIP1-213ENST00000493564 RBMY1A1P0DJD3 496 aaKnown RBP6.85□□□□□ -1.31
SGIP1-213ENST00000493564 RBMY1CP0DJD4 496 aa6.85□□□□□ -1.31
SGIP1-213ENST00000493564 CXCL3P19876 107 aa6.85□□□□□ -1.31
SGIP1-213ENST00000493564 MEOX2P50222 304 aa6.85□□□□□ -1.31
SGIP1-213ENST00000493564 B2MP61769 119 aa6.85□□□□□ -1.31
SGIP1-213ENST00000493564 NUTF2P61970 127 aaKnown RBP6.85□□□□□ -1.31
SGIP1-213ENST00000493564 OPCMLQ14982 345 aa6.85□□□□□ -1.31
SGIP1-213ENST00000493564 RBMY1FQ15415 496 aaKnown RBP6.85□□□□□ -1.31
SGIP1-213ENST00000493564 ATP6V1FQ16864 119 aa6.85□□□□□ -1.31
SGIP1-213ENST00000493564 PXDC1Q5TGL8 231 aa6.85□□□□□ -1.31
SGIP1-213ENST00000493564 SLC25A31Q9H0C2 315 aa6.85□□□□□ -1.31
SGIP1-213ENST00000493564 SLC39A9Q9NUM3 307 aa6.85□□□□□ -1.31
SGIP1-213ENST00000493564 PLECQ15149 4684 aaKnown RBP6.85□□□□□ -1.31
SGIP1-213ENST00000493564 ELOA3CA0A087WX78 387 aaPredicted RBP6.84□□□□□ -1.31
SGIP1-213ENST00000493564 IGHV4-28A0A0C4DH34 117 aa6.84□□□□□ -1.31
SGIP1-213ENST00000493564 ZNF705FA8MVS1 300 aaPredicted RBP6.84□□□□□ -1.31
SGIP1-213ENST00000493564 MRPS12O15235 138 aaKnown RBP6.84□□□□□ -1.31
SGIP1-213ENST00000493564 RPL29P47914 159 aaKnown RBP6.84□□□□□ -1.31
SGIP1-213ENST00000493564 PRR20EP86478 221 aa6.84□□□□□ -1.31
SGIP1-213ENST00000493564 PRR20CP86479 221 aa6.84□□□□□ -1.31
SGIP1-213ENST00000493564 PRR20DP86480 221 aa6.84□□□□□ -1.31
SGIP1-213ENST00000493564 PRR20BP86481 221 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms