RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 ZNF562Q6V9R5 426 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 ZNF833PQ6ZTB9 187 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 C8orf86Q6ZUL3 223 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 LINC00305Q7Z4B0 112 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 PCP2Q8IVA1 136 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 SBSPONQ8IVN8 264 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 ORMDL3Q8N138 153 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 TMEM75Q8N9X5 138 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 C1orf162Q8NEQ5 155 aaPredicted RBP5.38□□□□□ -1.55
EWSR1-220ENST00000493426 TMEM158Q8WZ71 300 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 ARPC1AQ92747 370 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 RAB37Q96AX2 223 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 MCRIP2Q9BUT9 160 aaKnown RBP5.38□□□□□ -1.55
EWSR1-220ENST00000493426 CHAC1Q9BUX1 264 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 SLC25A39Q9BZJ4 359 aaPredicted RBP5.38□□□□□ -1.55
EWSR1-220ENST00000493426 FAM234AQ9H0X4 552 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 ZNF71Q9NQZ8 489 aaPredicted RBP5.38□□□□□ -1.55
EWSR1-220ENST00000493426 DKK4Q9UBT3 224 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 SIT1Q9Y3P8 196 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 CACNA1HO95180 2353 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 ZNF292O60281 2723 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 MED12LQ86YW9 2145 aa5.38□□□□□ -1.55
EWSR1-220ENST00000493426 NCKAP5O14513 1909 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 TET2Q6N021 2002 aaPredicted RBP5.37□□□□□ -1.55
EWSR1-220ENST00000493426 K7EM74 188 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 IGKV3-15P01624 115 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 ACP1P24666 158 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 CD24P25063 80 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 FCER1GP30273 86 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 IFI27P40305 119 aaPredicted RBP5.37□□□□□ -1.55
EWSR1-220ENST00000493426 SSBP2P81877 361 aaPredicted RBP5.37□□□□□ -1.55
EWSR1-220ENST00000493426 FOXI1Q12951 378 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 ODF1Q14990 250 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 KLF17Q5JT82 389 aaPredicted RBP5.37□□□□□ -1.55
EWSR1-220ENST00000493426 PMS2CLQ68D20 193 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 LINC00696Q6ZRV3 163 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 DEFB119Q8N690 84 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 C8orf31Q8N9H6 132 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 TMEM116Q8NCL8 245 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 NPIPB3Q92617 1050 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 ZNF479Q96JC4 524 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 LINC01600Q96MT4 127 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 PRELID3AQ96N28 172 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 C18orf15Q96N68 181 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 HINT2Q9BX68 163 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 CDIP1Q9H305 208 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 Q9H3A6 140 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 ERG28Q9UKR5 140 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 CACNA1EQ15878 2313 aa5.37□□□□□ -1.55
EWSR1-220ENST00000493426 HCFC1P51610 2035 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 CACNA1DQ01668 2161 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 TRBV25-1A0A075B6N4 114 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 CGB1A6NKQ9 187 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 NTN3O00634 580 aaPredicted RBP5.36□□□□□ -1.55
EWSR1-220ENST00000493426 ZNHIT1O43257 154 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 WIPF1O43516 503 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 IGLV1-44P01699 117 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 CSN3P07498 182 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 ARMS2P0C7Q2 107 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 ZNF883P0CG24 379 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 SAA1P0DJI8 122 aaPredicted RBP5.36□□□□□ -1.55
EWSR1-220ENST00000493426 MYOD1P15172 320 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 GCSHP23434 173 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 LOXL1Q08397 574 aaPredicted RBP5.36□□□□□ -1.55
EWSR1-220ENST00000493426 GAGE5Q13069 117 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 GAGE6Q13070 117 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 CIARTQ8N365 385 aaPredicted RBP5.36□□□□□ -1.55
EWSR1-220ENST00000493426 RBMXL3Q8N7X1 1067 aaKnown RBP5.36□□□□□ -1.55
EWSR1-220ENST00000493426 OR8A1Q8NGG7 326 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 SRSF12Q8WXF0 261 aaKnown RBP5.36□□□□□ -1.55
EWSR1-220ENST00000493426 NAA38Q9BRA0 125 aaKnown RBP5.36□□□□□ -1.55
EWSR1-220ENST00000493426 C1QTNF4Q9BXJ3 329 aa5.36□□□□□ -1.55
EWSR1-220ENST00000493426 NXT2Q9NPJ8 142 aaKnown RBP5.36□□□□□ -1.55
EWSR1-220ENST00000493426 RPUSD1Q9UJJ7 312 aaKnown RBP5.36□□□□□ -1.55
EWSR1-220ENST00000493426 FRYLO94915 3013 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 GON4LQ3T8J9 2241 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 TRBV7-3A0A075B6L6 115 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 NPIPB5A8MRT5 1133 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 TMEM262E9PQX1 116 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 KLK10O43240 276 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 DPM2O94777 84 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 FAM106CPP0CH98 169 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 SPINK2P20155 84 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 GATA4P43694 442 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 CRIP1P50238 77 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 ETDBQ3ZM63 59 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 FAM106AQ4KMX7 169 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 ASPHD1Q5U4P2 390 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 CFAP126Q5VTH2 177 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 LINC00311Q8N616 119 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 CNFNQ9BYD5 112 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 CABIN1Q9Y6J0 2220 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 SDK2Q58EX2 2172 aa5.35□□□□□ -1.55
EWSR1-220ENST00000493426 VPS13AQ96RL7 3174 aa5.34□□□□□ -1.55
EWSR1-220ENST00000493426 ASCC3Q8N3C0 2202 aaKnown RBP5.34□□□□□ -1.55
EWSR1-220ENST00000493426 IGKV2D-26A0A0A0MRZ7 120 aa5.34□□□□□ -1.55
EWSR1-220ENST00000493426 D6R8Y8 96 aa5.34□□□□□ -1.55
EWSR1-220ENST00000493426 TNFRSF13BO14836 293 aaPredicted RBP5.34□□□□□ -1.55
EWSR1-220ENST00000493426 SLC25A17O43808 307 aa5.34□□□□□ -1.55
EWSR1-220ENST00000493426 TIMM8AO60220 97 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms