RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 C17orf112F2Z3M2 114 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 H3BRM9 83 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 NIPSNAP2O75323 286 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 ERC2-IT1O76042 136 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 OR7C1O76099 320 aaPredicted RBP-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 RPP14O95059 124 aaKnown RBP-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 IGLV1-51P01701 117 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 TCRBP04435 133 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 SMIM17P0DL12 118 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 CXCL8P10145 99 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 SRP14P37108 136 aaKnown RBP-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 PIGPP57054 158 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 AESQ08117 197 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 KRR1Q13601 381 aaKnown RBP-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 TEN1Q86WV5 123 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 OR8J2Q8NGG1 315 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 OR10AG1Q8NH19 301 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 Q8TAT8 98 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 STAG3L4Q8TBR4 150 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 ARL5BQ96KC2 179 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 CCDC42Q96M95 316 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 PRAP1Q96NZ9 151 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 SLC25A21Q9BQT8 299 aaPredicted RBP-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 IMUPQ9GZP8 106 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 PBOV1Q9GZY1 135 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 MGAMO43451 1857 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 NUP210LQ5VU65 1888 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 LRP1Q07954 4544 aaKnown RBP-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 BDP1A6H8Y1 2624 aa-0.08□□□□□ -2.42
SYCP1-208ENST00000493377 CCDC144AA2RUR9 1427 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 BCL9O00512 1426 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 F8W1H4 67 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 NDUFB3O43676 98 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 GGCTO75223 188 aaKnown RBP-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 CCL4P13236 92 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 ZNF137PP52743 207 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 CEBPGP53567 150 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 MYL6P60660 151 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 CCL7P80098 99 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 MYL5Q02045 173 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 SPATA45Q537H7 98 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 PATE2Q6UY27 113 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 OR5AS1Q8N127 324 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 OR5D14Q8NGL3 314 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 UCK1Q9HA47 277 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 TMEM138Q9NPI0 162 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 MED29Q9NX70 200 aa-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 TPRP12270 2363 aaKnown RBP-0.09□□□□□ -2.42
SYCP1-208ENST00000493377 COL7A1Q02388 2944 aa-0.1□□□□□ -2.42
SYCP1-208ENST00000493377 ZFYVE9O95405 1425 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 ERBINQ96RT1 1412 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 TRAV27A0A087WT01 109 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 A6NN06 94 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 TMEM114B3SHH9 223 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 JMJD7-PLA2G4BH0Y9G9 81 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 OR10J4P0C629 311 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 CYBAP13498 195 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 HLA-EP13747 358 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 FXYD6P3P58550 94 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 CDK6Q00534 326 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 C1orf134Q5TEV5 83 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 OTUD6BQ8N6M0 293 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 GNPDA2Q8TDQ7 276 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 TSKUQ8WUA8 353 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 MUCL1Q96DR8 90 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 PARVGQ9HBI0 331 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 OR52A1Q9UKL2 312 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 SLC22A13Q9Y226 551 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 RNF11Q9Y3C5 154 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 NISCHQ9Y2I1 1504 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 LOC285556D6RIA3 1793 aa-0.1□□□□□ -2.43
SYCP1-208ENST00000493377 HRNRQ86YZ3 2850 aaPredicted RBP-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 IGF2RP11717 2491 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 TRBV30A0A0K0K1B3 111 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 C5orf67F2Z3F1 127 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 TAX1BP3O14907 124 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 LYPLA2O95372 231 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 IGHV3-33P01772 117 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 CD2P06729 351 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 ERP29P30040 261 aaKnown RBP-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 ATP5G3P48201 142 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 UBE2BP63146 152 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 BCL2L15Q5TBC7 163 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 SPINK6Q6UWN8 80 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 ARPINQ7Z6K5 226 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 PPTC7Q8NI37 304 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 NMNAT1Q9HAN9 279 aaPredicted RBP-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 NINQ8N4C6 2090 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 MYH2Q9UKX2 1941 aa-0.11□□□□□ -2.43
SYCP1-208ENST00000493377 ATG2AQ2TAZ0 1938 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 FAM159BA6NKW6 160 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 PPYP01298 95 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 IFNA7P01567 189 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 C1QBP02746 253 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 RPS17P08708 135 aaKnown RBP-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 SPINT3P49223 89 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 RAB5CP51148 216 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 DYNLT3P51808 116 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 ERVS71-1P61550 626 aa-0.12□□□□□ -2.43
SYCP1-208ENST00000493377 VBP1P61758 197 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms