RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 GCGP01275 180 aa10.92□□□□□ -0.66
PTPN7-216ENST00000492977 SNRPCP09234 159 aaKnown RBP10.92□□□□□ -0.66
PTPN7-216ENST00000492977 IGLC2P0DOY2 106 aa10.92□□□□□ -0.66
PTPN7-216ENST00000492977 HNF1AP20823 631 aa10.92□□□□□ -0.66
PTPN7-216ENST00000492977 FOXL1Q12952 345 aa10.92□□□□□ -0.66
PTPN7-216ENST00000492977 TMEM183BQ1AE95 376 aa10.92□□□□□ -0.66
PTPN7-216ENST00000492977 CYB5R2Q6BCY4 276 aa10.92□□□□□ -0.66
PTPN7-216ENST00000492977 KRTAP1-3Q8IUG1 177 aa10.92□□□□□ -0.66
PTPN7-216ENST00000492977 BCL6BQ8N143 479 aaPredicted RBP10.92□□□□□ -0.66
PTPN7-216ENST00000492977 CCDC140Q96MF4 163 aa10.92□□□□□ -0.66
PTPN7-216ENST00000492977 RABAC1Q9UI14 185 aa10.92□□□□□ -0.66
PTPN7-216ENST00000492977 ZNF580Q9UK33 172 aa10.92□□□□□ -0.66
PTPN7-216ENST00000492977 KLF12Q9Y4X4 402 aa10.92□□□□□ -0.66
PTPN7-216ENST00000492977 TRBV19A0A075B6N1 114 aa10.91□□□□□ -0.66
PTPN7-216ENST00000492977 AP4M1O00189 453 aa10.91□□□□□ -0.66
PTPN7-216ENST00000492977 IGLV2-8P01709 118 aa10.91□□□□□ -0.66
PTPN7-216ENST00000492977 IER3P46695 156 aa10.91□□□□□ -0.66
PTPN7-216ENST00000492977 OR5R1Q8NH85 324 aa10.91□□□□□ -0.66
PTPN7-216ENST00000492977 ATG101Q9BSB4 218 aa10.91□□□□□ -0.66
PTPN7-216ENST00000492977 PRRC2AP48634 2157 aaKnown RBP10.91□□□□□ -0.66
PTPN7-216ENST00000492977 TRGV3P03979 118 aa10.9□□□□□ -0.66
PTPN7-216ENST00000492977 PPIFP30405 207 aaKnown RBP10.9□□□□□ -0.66
PTPN7-216ENST00000492977 BLCAPP62952 87 aa10.9□□□□□ -0.66
PTPN7-216ENST00000492977 PDE6HQ13956 83 aa10.9□□□□□ -0.66
PTPN7-216ENST00000492977 CLEC19AQ6UXS0 136 aa10.9□□□□□ -0.66
PTPN7-216ENST00000492977 SMIM12Q96EX1 92 aa10.9□□□□□ -0.66
PTPN7-216ENST00000492977 LINC00479Q96M42 142 aa10.9□□□□□ -0.66
PTPN7-216ENST00000492977 OSTCQ9NRP0 149 aa10.9□□□□□ -0.66
PTPN7-216ENST00000492977 LINC00527Q9UJ94 153 aa10.9□□□□□ -0.66
PTPN7-216ENST00000492977 VPS13CQ709C8 3753 aa10.9□□□□□ -0.66
PTPN7-216ENST00000492977 H3BTX0 84 aa10.9□□□□□ -0.67
PTPN7-216ENST00000492977 ISLRO14498 428 aa10.9□□□□□ -0.67
PTPN7-216ENST00000492977 RPL7P18124 248 aaKnown RBP10.9□□□□□ -0.67
PTPN7-216ENST00000492977 RAB9AP51151 201 aa10.9□□□□□ -0.67
PTPN7-216ENST00000492977 ERVFC1-1P60608 527 aa10.9□□□□□ -0.67
PTPN7-216ENST00000492977 UBE2G1P62253 170 aa10.9□□□□□ -0.67
PTPN7-216ENST00000492977 GNG5P63218 68 aa10.9□□□□□ -0.67
PTPN7-216ENST00000492977 RELQ04864 619 aaPredicted RBP10.9□□□□□ -0.67
PTPN7-216ENST00000492977 TOMM20LQ6UXN7 152 aa10.9□□□□□ -0.67
PTPN7-216ENST00000492977 BAGE2Q86Y30 109 aa10.9□□□□□ -0.67
PTPN7-216ENST00000492977 FMC1Q96HJ9 113 aa10.9□□□□□ -0.67
PTPN7-216ENST00000492977 ZNF414Q96IQ9 312 aa10.9□□□□□ -0.67
PTPN7-216ENST00000492977 USMG5Q96IX5 58 aa10.9□□□□□ -0.67
PTPN7-216ENST00000492977 SRD5A3Q9H8P0 318 aa10.9□□□□□ -0.67
PTPN7-216ENST00000492977 TRAV9-1A0A075B6T8 112 aa10.89□□□□□ -0.67
PTPN7-216ENST00000492977 A0A1W2PPQ1 181 aa10.89□□□□□ -0.67
PTPN7-216ENST00000492977 PPP5D1E7EU14 171 aa10.89□□□□□ -0.67
PTPN7-216ENST00000492977 IGHV4-59P01825 116 aa10.89□□□□□ -0.67
PTPN7-216ENST00000492977 TCRAP04437 139 aa10.89□□□□□ -0.67
PTPN7-216ENST00000492977 TYMSP04818 313 aa10.89□□□□□ -0.67
PTPN7-216ENST00000492977 S100A6P06703 90 aa10.89□□□□□ -0.67
PTPN7-216ENST00000492977 OR5I1Q13606 314 aa10.89□□□□□ -0.67
PTPN7-216ENST00000492977 CMTM2Q8TAZ6 248 aa10.89□□□□□ -0.67
PTPN7-216ENST00000492977 IL36BQ9NZH7 164 aa10.89□□□□□ -0.67
PTPN7-216ENST00000492977 CSPG4Q6UVK1 2322 aa10.89□□□□□ -0.67
PTPN7-216ENST00000492977 DOPEY2Q9Y3R5 2298 aa10.88□□□□□ -0.67
PTPN7-216ENST00000492977 POLQO75417 2590 aa10.88□□□□□ -0.67
PTPN7-216ENST00000492977 NAV2Q8IVL1 2488 aa10.88□□□□□ -0.67
PTPN7-216ENST00000492977 TRAV34A0A0B4J273 112 aa10.88□□□□□ -0.67
PTPN7-216ENST00000492977 MGST1P10620 155 aaKnown RBP10.88□□□□□ -0.67
PTPN7-216ENST00000492977 FAM3BP58499 235 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-216ENST00000492977 Q6YL49 198 aa10.88□□□□□ -0.67
PTPN7-216ENST00000492977 NOL4LQ96MY1 436 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-216ENST00000492977 GNB4Q9HAV0 340 aa10.88□□□□□ -0.67
PTPN7-216ENST00000492977 V9GYV3 84 aa10.88□□□□□ -0.67
PTPN7-216ENST00000492977 TRGC2P03986 189 aa10.87□□□□□ -0.67
PTPN7-216ENST00000492977 TPPP2P59282 170 aa10.87□□□□□ -0.67
PTPN7-216ENST00000492977 SIGLEC15Q6ZMC9 328 aa10.87□□□□□ -0.67
PTPN7-216ENST00000492977 OR8I2Q8N0Y5 310 aa10.87□□□□□ -0.67
PTPN7-216ENST00000492977 EXOC3-AS1Q8N2X6 119 aa10.87□□□□□ -0.67
PTPN7-216ENST00000492977 C17orf77Q96MU5 243 aa10.87□□□□□ -0.67
PTPN7-216ENST00000492977 GPR82Q96P67 336 aa10.87□□□□□ -0.67
PTPN7-216ENST00000492977 SAV1Q9H4B6 383 aaPredicted RBP10.87□□□□□ -0.67
PTPN7-216ENST00000492977 IGHV3-35A0A0C4DH35 117 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 TRBV6-1A0A0K0K1D8 114 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 C5orf52A6NGY3 159 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 IGLV1-40P01703 118 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 PSG9Q00887 426 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 RPEL1Q2QD12 228 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 HIST2H2BCQ6DN03 193 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 Q6ZS46 218 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 FAM231DQ6ZW35 169 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 PRDM13Q9H4Q3 707 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 RPH3ALQ9UNE2 315 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 CHD6Q8TD26 2715 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 CELSR2Q9HCU4 2923 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 SVEP1Q4LDE5 3571 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 A0A0G2JLM5 398 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 SLC17A3O00476 420 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 ZNF253O75346 499 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 LTAP01374 205 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 SNRPEP62304 92 aaKnown RBP10.86□□□□□ -0.67
PTPN7-216ENST00000492977 CFHR3Q02985 330 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 IBA57Q5T440 356 aaKnown RBP10.86□□□□□ -0.67
PTPN7-216ENST00000492977 C1orf194Q5T5A4 169 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 TEX29Q8N6K0 151 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 ARL6IP6Q8N6S5 226 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 MLST8Q9BVC4 326 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 RNASE7Q9H1E1 156 aaKnown RBP10.86□□□□□ -0.67
PTPN7-216ENST00000492977 AAMDCQ9H7C9 122 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms