RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 OR2J3O76001 311 aa9.81□□□□□ -0.84
HMGN1-220ENST00000492280 RNF224P0DH78 156 aa9.81□□□□□ -0.84
HMGN1-220ENST00000492280 C5orf64Q2M2E5 130 aa9.81□□□□□ -0.84
HMGN1-220ENST00000492280 ATOH7Q8N100 152 aa9.81□□□□□ -0.84
HMGN1-220ENST00000492280 ABCA12Q86UK0 2595 aa9.8□□□□□ -0.84
HMGN1-220ENST00000492280 TRAV9-1A0A075B6T8 112 aa9.8□□□□□ -0.84
HMGN1-220ENST00000492280 OR2T8A6NH00 312 aa9.8□□□□□ -0.84
HMGN1-220ENST00000492280 PMCHL1Q16048 86 aa9.8□□□□□ -0.84
HMGN1-220ENST00000492280 C5orf17Q8NAS9 161 aa9.8□□□□□ -0.84
HMGN1-220ENST00000492280 NOL4LQ96MY1 436 aaPredicted RBP9.8□□□□□ -0.84
HMGN1-220ENST00000492280 GPR82Q96P67 336 aa9.8□□□□□ -0.84
HMGN1-220ENST00000492280 ODF3BA8MYP8 253 aa9.8□□□□□ -0.84
HMGN1-220ENST00000492280 HOXB4P17483 251 aaPredicted RBP9.8□□□□□ -0.84
HMGN1-220ENST00000492280 OR11H6Q8NGC7 330 aa9.8□□□□□ -0.84
HMGN1-220ENST00000492280 FANCD2OSQ96PS1 177 aa9.8□□□□□ -0.84
HMGN1-220ENST00000492280 A0A1W2PS18 150 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 GNG7O60262 68 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 PRTN3P24158 256 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 Q56UQ5 140 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 ZNF491Q8N8L2 437 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 RNF125Q96EQ8 232 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 GRAMD2BQ96HH9 432 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 BPESC1Q9GZL8 116 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 DOPEY1Q5JWR5 2465 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 IGHV3OR16-13A0A075B7E8 117 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 IGHV3-74A0A0B4J1X5 117 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 ECSCRQ19T08 205 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 WDR73Q6P4I2 378 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 Q86TA4 180 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 SIGLECL1Q8N7X8 197 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 C18orf32Q8TCD1 76 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 ARPC1AQ92747 370 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 TPPP3Q9BW30 176 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 NRN1Q9NPD7 142 aa9.79□□□□□ -0.84
HMGN1-220ENST00000492280 MUC21A0A0G2JKD1 596 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 MUC21A0A140T8X8 626 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 NDUFB8O95169 186 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 P01737 135 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 HLA-DQA1P01909 254 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 MUC21Q5SSG8 566 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 STXBP6Q8NFX7 210 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 TSKUQ8WUA8 353 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 MLST8Q9BVC4 326 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 F8W735 103 aaPredicted RBP9.78□□□□□ -0.84
HMGN1-220ENST00000492280 IGLV2-11P01706 119 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 HLA-DRB1P01911 266 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 GPX1P07203 203 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 HIST1H1EP10412 219 aaKnown RBP9.78□□□□□ -0.84
HMGN1-220ENST00000492280 GNLYP22749 145 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 BRS3P32247 399 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 Q0VG73 95 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 LCN12Q6JVE5 192 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 KCNS1Q96KK3 526 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 RPP21Q9H633 154 aaKnown RBP9.78□□□□□ -0.84
HMGN1-220ENST00000492280 MRPL27Q9P0M9 148 aaKnown RBP9.78□□□□□ -0.84
HMGN1-220ENST00000492280 TLN2Q9Y4G6 2542 aa9.78□□□□□ -0.84
HMGN1-220ENST00000492280 TMSB15BA0A087X1C1 80 aa9.77□□□□□ -0.84
HMGN1-220ENST00000492280 TRBV9A0A0B4J1U6 114 aa9.77□□□□□ -0.84
HMGN1-220ENST00000492280 LINC01548A6NM66 108 aa9.77□□□□□ -0.84
HMGN1-220ENST00000492280 LTAP01374 205 aa9.77□□□□□ -0.84
HMGN1-220ENST00000492280 MT-ND6P03923 174 aa9.77□□□□□ -0.84
HMGN1-220ENST00000492280 PAX1P15863 534 aa9.77□□□□□ -0.84
HMGN1-220ENST00000492280 TMEM11P17152 192 aa9.77□□□□□ -0.84
HMGN1-220ENST00000492280 MAJINQ3KP22 176 aa9.77□□□□□ -0.84
HMGN1-220ENST00000492280 DNLZQ5SXM8 178 aa9.77□□□□□ -0.84
HMGN1-220ENST00000492280 RNASEKQ6P5S7 137 aaKnown RBP9.77□□□□□ -0.84
HMGN1-220ENST00000492280 ZC2HC1AQ96GY0 325 aa9.77□□□□□ -0.84
HMGN1-220ENST00000492280 NDUFAF3Q9BU61 184 aa9.77□□□□□ -0.84
HMGN1-220ENST00000492280 ZNF462Q96JM2 2506 aa9.77□□□□□ -0.84
HMGN1-220ENST00000492280 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.85
HMGN1-220ENST00000492280 ZNF785A8K8V0 405 aa9.77□□□□□ -0.85
HMGN1-220ENST00000492280 NDUFA3O95167 84 aa9.77□□□□□ -0.85
HMGN1-220ENST00000492280 COL8A1P27658 744 aa9.77□□□□□ -0.85
HMGN1-220ENST00000492280 HLA-DMBP28068 263 aa9.77□□□□□ -0.85
HMGN1-220ENST00000492280 CEACAM3P40198 252 aa9.77□□□□□ -0.85
HMGN1-220ENST00000492280 FAM231DQ6ZW35 169 aa9.77□□□□□ -0.85
HMGN1-220ENST00000492280 CHRDL1Q9BU40 450 aa9.77□□□□□ -0.85
HMGN1-220ENST00000492280 LINC00527Q9UJ94 153 aa9.77□□□□□ -0.85
HMGN1-220ENST00000492280 TIMM8BQ9Y5J9 83 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-220ENST00000492280 TOMM40O96008 361 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 PLP1P60201 277 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 ZNF705AQ6ZN79 300 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-220ENST00000492280 C8orf49Q96NF6 230 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 SHANK2-AS3Q9BTD1 123 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 KLF12Q9Y4X4 402 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 PTPN13Q12923 2485 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 H3BRN7 92 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 ZNF138P52744 262 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 NIT1Q86X76 327 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 ANKRD17O75179 2603 aaKnown RBP9.76□□□□□ -0.85
HMGN1-220ENST00000492280 TRBV19A0A075B6N1 114 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 IGHV3-49A0A0A0MS15 119 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 M0R1W7 72 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 ZNF324O75467 553 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-220ENST00000492280 SIGLEC15Q6ZMC9 328 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 TMEM219Q86XT9 240 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 BPIFA4PQ86YQ2 179 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 Q8N976 141 aa9.76□□□□□ -0.85
HMGN1-220ENST00000492280 NEU4Q8WWR8 484 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-220ENST00000492280 DAZAP1Q96EP5 407 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms