RNA–Protein interactions for RNA: ENST00000490647.1

LINC02049-201, Transcript of long intergenic non-protein coding RNA 2049, humanhuman

TSL 1 (best) BASIC

Gene LINC02049, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02049-201ENST00000490647 FOXA1P55317 472 aa2.48□□□□□ -2.01
LINC02049-201ENST00000490647 FOXA3P55318 350 aaPredicted RBP2.48□□□□□ -2.01
LINC02049-201ENST00000490647 MYL5Q02045 173 aa2.48□□□□□ -2.01
LINC02049-201ENST00000490647 CCSMST1Q4G0I0 132 aa2.48□□□□□ -2.01
LINC02049-201ENST00000490647 DPPA3Q6W0C5 159 aa2.48□□□□□ -2.01
LINC02049-201ENST00000490647 C3orf56Q8N813 242 aa2.48□□□□□ -2.01
LINC02049-201ENST00000490647 NAT14Q8WUY8 206 aa2.48□□□□□ -2.01
LINC02049-201ENST00000490647 DEDD2Q8WXF8 326 aa2.48□□□□□ -2.01
LINC02049-201ENST00000490647 AQP3Q92482 292 aa2.48□□□□□ -2.01
LINC02049-201ENST00000490647 MAGOHBQ96A72 148 aaKnown RBP2.48□□□□□ -2.01
LINC02049-201ENST00000490647 SOX21Q9Y651 276 aaPredicted RBP2.48□□□□□ -2.01
LINC02049-201ENST00000490647 MINOS1-NBL1R4GNA1 71 aa2.48□□□□□ -2.01
LINC02049-201ENST00000490647 ERBINQ96RT1 1412 aa2.48□□□□□ -2.01
LINC02049-201ENST00000490647 EML6Q6ZMW3 1958 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 GRIN2AQ12879 1464 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 LTBP4Q8N2S1 1624 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 DOCK9Q9BZ29 2069 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 C11orf86A6NJI1 115 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 A8MWV9 139 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 H3BPC8 53 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 CORTO00230 105 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 TCL1BO95988 128 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 IFNA4P05014 189 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 SLC25A5P05141 298 aaKnown RBP2.47□□□□□ -2.01
LINC02049-201ENST00000490647 CD24P25063 80 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 AKR1D1P51857 326 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 LY6EQ16553 131 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 ZNF181Q2M3W8 571 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 ZNF880Q6PDB4 577 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 C7orf65Q6ZTY9 151 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 LYPD6Q86Y78 171 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 TCTEX1D1Q8N7M0 179 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 Q8NAQ8 132 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 PKMYT1Q99640 499 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 TIMM9Q9Y5J7 89 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 S4R3C0 116 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 THADAQ6YHU6 1953 aa2.47□□□□□ -2.01
LINC02049-201ENST00000490647 MYH7P12883 1935 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 MBD5Q9P267 1494 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 WDR90Q96KV7 1748 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 FAM135BQ49AJ0 1406 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 TRAV27A0A087WT01 109 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 SPAARA0A1B0GVQ0 90 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 TMEM235A6NFC5 223 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 OR2T8A6NH00 312 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 ZNF727A8MUV8 499 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 TIMM17BO60830 172 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 NCR2O95944 276 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 S100A8P05109 93 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 FGF7P21781 194 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 SNRPD3P62318 126 aaKnown RBP2.46□□□□□ -2.02
LINC02049-201ENST00000490647 QRFPP83859 136 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 RELAQ04206 551 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 KRTAP25-1Q3LHN0 102 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 FAM27BQ5VT28 67 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 PATE2Q6UY27 113 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 C3orf62Q6ZUJ4 267 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.46□□□□□ -2.02
LINC02049-201ENST00000490647 MORN4Q8NDC4 146 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 Q8NDZ9 215 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 PPP3R2Q96LZ3 170 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 TXNL4BQ9NX01 149 aaKnown RBP2.46□□□□□ -2.02
LINC02049-201ENST00000490647 COMMD3Q9UBI1 195 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 NUP98P52948 1817 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 DLC1Q96QB1 1528 aa2.46□□□□□ -2.02
LINC02049-201ENST00000490647 COL27A1Q8IZC6 1860 aaPredicted RBP2.45□□□□□ -2.02
LINC02049-201ENST00000490647 ARHGEF28Q8N1W1 1705 aaKnown RBP2.45□□□□□ -2.02
LINC02049-201ENST00000490647 TUBGCP6Q96RT7 1819 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 LCTP09848 1927 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 IGLV4-60A0A075B6I1 120 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 TRAV7A0A075B6U4 112 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 IGHV3OR16-8A0A075B7F1 116 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 TRGV5A0A0B4J1U4 118 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 BBIP1A8MTZ0 92 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 SDCBPO00560 298 aaPredicted RBP2.45□□□□□ -2.02
LINC02049-201ENST00000490647 SNAPC5O75971 98 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 SHBGP04278 402 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 NFYAP23511 347 aaPredicted RBP2.45□□□□□ -2.02
LINC02049-201ENST00000490647 COL8A2P25067 703 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 KLRD1Q13241 179 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 KPRPQ5T749 579 aaPredicted RBP2.45□□□□□ -2.02
LINC02049-201ENST00000490647 LYZL1Q6UWQ5 148 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 Q6ZS52 159 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 DYNAPQ8N1N2 210 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 OR5D14Q8NGL3 314 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 OR8B2Q96RD0 313 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 PSMG3Q9BT73 122 aaPredicted RBP2.45□□□□□ -2.02
LINC02049-201ENST00000490647 CST9LQ9H4G1 147 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 BCL2L10Q9HD36 194 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 SCN3BQ9NY72 215 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 ARHGEF11O15085 1522 aa2.45□□□□□ -2.02
LINC02049-201ENST00000490647 ARHGAP31Q2M1Z3 1444 aa2.44□□□□□ -2.02
LINC02049-201ENST00000490647 MYOM3Q5VTT5 1437 aa2.44□□□□□ -2.02
LINC02049-201ENST00000490647 NYNRINQ9P2P1 1898 aaKnown RBP2.44□□□□□ -2.02
LINC02049-201ENST00000490647 IGLV3-9A0A075B6K5 115 aa2.44□□□□□ -2.02
LINC02049-201ENST00000490647 TRAV3A0A0B4J244 114 aa2.44□□□□□ -2.02
LINC02049-201ENST00000490647 A0A1B0GU33 70 aa2.44□□□□□ -2.02
LINC02049-201ENST00000490647 A0A1B0GVG6 124 aa2.44□□□□□ -2.02
LINC02049-201ENST00000490647 C7orf71A4D174 169 aa2.44□□□□□ -2.02
LINC02049-201ENST00000490647 H7C2G1 150 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms