RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PYCARDQ9ULZ3 195 aa0.64□□□□□ -2.31
CD46-216ENST00000490278 SNRNP200O75643 2136 aaKnown RBP0.64□□□□□ -2.31
CD46-216ENST00000490278 A0A087WSZ3 146 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 OR2T8A6NH00 312 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 F8W1H4 67 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 M0R233 179 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 OR10J4P0C629 311 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 CXCL8P10145 99 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 NFYBP25208 207 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 C1orf134Q5TEV5 83 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 KRTAP26-1Q6PEX3 210 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 KRTAP19-3Q7Z4W3 81 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 RAB37Q96AX2 223 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 MUCL1Q96DR8 90 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 CEP19Q96LK0 163 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 PBOV1Q9GZY1 135 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 CASP8AP2Q9UKL3 1982 aa0.63□□□□□ -2.31
CD46-216ENST00000490278 DUXBA0A1W2PPF3 345 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 G3V2T6 193 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 H3BRM9 83 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 AIPO00170 330 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 ATP5HO75947 161 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 HOXA6P31267 233 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 PXT1Q8NFP0 134 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 OR5D16Q8NGK9 328 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 Q8TAT8 98 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 POP5Q969H6 163 aaKnown RBP0.62□□□□□ -2.31
CD46-216ENST00000490278 LYSMD1Q96S90 227 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 POPDC3Q9HBV1 291 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 TMEM138Q9NPI0 162 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 MED29Q9NX70 200 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 CAMSAP1Q5T5Y3 1602 aa0.62□□□□□ -2.31
CD46-216ENST00000490278 CECR2Q9BXF3 1484 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 IGLV1-51P01701 117 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 CRHP06850 196 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 COX7CP15954 63 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 RAB5CP51148 216 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 MRPS15P82914 257 aaKnown RBP0.61□□□□□ -2.31
CD46-216ENST00000490278 SCGB2B2Q4G0G5 96 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 DHRS4L2Q6PKH6 230 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 PATE2Q6UY27 113 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 EXOC3-AS1Q8N2X6 119 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 GGACTQ9BVM4 153 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 CCDC94Q9BW85 323 aaPredicted RBP0.61□□□□□ -2.31
CD46-216ENST00000490278 OR52A1Q9UKL2 312 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 PRNDQ9UKY0 176 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 ALPK3Q96L96 1907 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 HEATR1Q9H583 2144 aaKnown RBP0.61□□□□□ -2.31
CD46-216ENST00000490278 PLXNA4Q9HCM2 1894 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 CEP164Q9UPV0 1460 aa0.61□□□□□ -2.31
CD46-216ENST00000490278 TENM3Q9P273 2699 aa0.6□□□□□ -2.31
CD46-216ENST00000490278 ATG12O94817 140 aa0.6□□□□□ -2.31
CD46-216ENST00000490278 ARF6P62330 175 aa0.6□□□□□ -2.31
CD46-216ENST00000490278 GNG5P63218 68 aa0.6□□□□□ -2.31
CD46-216ENST00000490278 HACD4Q5VWC8 232 aa0.6□□□□□ -2.31
CD46-216ENST00000490278 LINC00575Q6W349 94 aa0.6□□□□□ -2.31
CD46-216ENST00000490278 OR5AS1Q8N127 324 aa0.6□□□□□ -2.31
CD46-216ENST00000490278 OR4K15Q8NH41 348 aa0.6□□□□□ -2.31
CD46-216ENST00000490278 CHCHD1Q96BP2 118 aaKnown RBP0.6□□□□□ -2.31
CD46-216ENST00000490278 ZNF714Q96N38 554 aa0.6□□□□□ -2.31
CD46-216ENST00000490278 OR2J1Q9GZK6 312 aa0.6□□□□□ -2.31
CD46-216ENST00000490278 MED12Q93074 2177 aa0.6□□□□□ -2.31
CD46-216ENST00000490278 TRAV27A0A087WT01 109 aa0.59□□□□□ -2.31
CD46-216ENST00000490278 H7C1C5 153 aa0.59□□□□□ -2.31
CD46-216ENST00000490278 IGLV3-1P01715 115 aa0.59□□□□□ -2.31
CD46-216ENST00000490278 PHBP35232 272 aa0.59□□□□□ -2.31
CD46-216ENST00000490278 LCN6P62502 163 aa0.59□□□□□ -2.31
CD46-216ENST00000490278 AKR1C8PQ5T2L2 129 aa0.59□□□□□ -2.31
CD46-216ENST00000490278 IFT20Q8IY31 132 aa0.59□□□□□ -2.31
CD46-216ENST00000490278 PSMF1Q92530 271 aa0.59□□□□□ -2.31
CD46-216ENST00000490278 ZHX1-C8orf76Q96EF9 292 aa0.59□□□□□ -2.31
CD46-216ENST00000490278 ZC2HC1AQ96GY0 325 aa0.59□□□□□ -2.31
CD46-216ENST00000490278 HYLS1Q96M11 299 aa0.59□□□□□ -2.31
CD46-216ENST00000490278 NUP98P52948 1817 aa0.59□□□□□ -2.32
CD46-216ENST00000490278 RFX7Q2KHR2 1363 aa0.58□□□□□ -2.32
CD46-216ENST00000490278 INSL3P51460 131 aa0.58□□□□□ -2.32
CD46-216ENST00000490278 ARPINQ7Z6K5 226 aa0.58□□□□□ -2.32
CD46-216ENST00000490278 PPTC7Q8NI37 304 aa0.58□□□□□ -2.32
CD46-216ENST00000490278 PAIP2Q9BPZ3 127 aaKnown RBP0.58□□□□□ -2.32
CD46-216ENST00000490278 CACYBPQ9HB71 228 aaKnown RBP0.58□□□□□ -2.32
CD46-216ENST00000490278 LYRM2Q9NU23 88 aaPredicted RBP0.58□□□□□ -2.32
CD46-216ENST00000490278 SSR3Q9UNL2 185 aa0.58□□□□□ -2.32
CD46-216ENST00000490278 PHRF1Q9P1Y6 1649 aaKnown RBP0.57□□□□□ -2.32
CD46-216ENST00000490278 RIIAD1A6NNX1 92 aa0.57□□□□□ -2.32
CD46-216ENST00000490278 IFNA14P01570 189 aa0.57□□□□□ -2.32
CD46-216ENST00000490278 APOA2P02652 100 aa0.57□□□□□ -2.32
CD46-216ENST00000490278 TRGC2P03986 189 aa0.57□□□□□ -2.32
CD46-216ENST00000490278 CXCL1P09341 107 aa0.57□□□□□ -2.32
CD46-216ENST00000490278 TMBIM6P55061 237 aa0.57□□□□□ -2.32
CD46-216ENST00000490278 ARPP19P56211 112 aa0.57□□□□□ -2.32
CD46-216ENST00000490278 KLRD1Q13241 179 aa0.57□□□□□ -2.32
CD46-216ENST00000490278 OR10AG1Q8NH19 301 aa0.57□□□□□ -2.32
CD46-216ENST00000490278 GPX7Q96SL4 187 aaPredicted RBP0.57□□□□□ -2.32
CD46-216ENST00000490278 SH3BGRL3Q9H299 93 aa0.57□□□□□ -2.32
CD46-216ENST00000490278 DOCK4Q8N1I0 1966 aa0.57□□□□□ -2.32
CD46-216ENST00000490278 UNC13CQ8NB66 2214 aa0.57□□□□□ -2.32
CD46-216ENST00000490278 MYO18AQ92614 2054 aaKnown RBP0.57□□□□□ -2.32
CD46-216ENST00000490278 UHRF1BP1Q6BDS2 1440 aa0.56□□□□□ -2.32
CD46-216ENST00000490278 UBR2Q8IWV8 1755 aa0.56□□□□□ -2.32
CD46-216ENST00000490278 JMJD7-PLA2G4BH0Y9G9 81 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms