RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 MAP1LC3BQ9GZQ8 125 aa7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 ZFAND3Q9H8U3 227 aa7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 VAX2Q9UIW0 290 aa7.99□□□□□ -1.13
SCAMP4-208ENST00000489554 LGALS9O00182 355 aa7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 GNG7O60262 68 aa7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 YIF1AO95070 293 aa7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 FRMD6-AS1P0C7T7 363 aa7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 ARL3P36405 182 aa7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 CDC34P49427 236 aaPredicted RBP7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 ELLP55199 621 aaPredicted RBP7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 YPEL3P61236 119 aaPredicted RBP7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 FAM74A3Q4VXF1 159 aa7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 MIC13Q5XKP0 118 aa7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 CYP2G1PQ6ZSU1 146 aa7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 GTSCR1Q86UQ5 136 aa7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 GPHB5Q86YW7 130 aa7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 Q8N1Y9 231 aa7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 PRELID1Q9Y255 219 aa7.98□□□□□ -1.13
SCAMP4-208ENST00000489554 TRAV30A0A087WSZ9 112 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 IGHV3-35A0A0C4DH35 117 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 ZFP92A6NM28 416 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 A8MZ25 164 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 OR2C1O95371 312 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 TOMM40O96008 361 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 IGHV4-30-4P0DP06 118 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 BCL2P10415 239 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 PSG1P11464 419 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 SELENOTP62341 195 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 RHOBP62745 196 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 SRSF3P84103 164 aaKnown RBP7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 RHEBQ15382 184 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 FAM106AQ4KMX7 169 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 LCN15Q6UWW0 184 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 PATE2Q6UY27 113 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 SBSPONQ8IVN8 264 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 STPG3Q8N7X2 389 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 DYNLRB2Q8TF09 96 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 TMEM231Q9H6L2 316 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 COL7A1Q02388 2944 aa7.97□□□□□ -1.13
SCAMP4-208ENST00000489554 LOC102723971A0A1B0GUV8 181 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 C2orf70A6NJV1 201 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 B4DEV8 164 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 CXorf1O96002 111 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 TAS2R45P59539 299 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 PLP1P60201 277 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 B2MP61769 119 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 PNRC1Q12796 327 aaPredicted RBP7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 BTN1A1Q13410 526 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 USF2Q15853 346 aaPredicted RBP7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 HAGHQ16775 308 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 GCSAMLQ5JQS6 135 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 TOMM20LQ6UXN7 152 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 UNQ9165/PRO28630Q6UXU0 137 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 ZNF600Q6ZNG1 722 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 RPP25LQ8N5L8 163 aaKnown RBP7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 CLRN3Q8NCR9 226 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 NIPSNAP3BQ9BS92 247 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 VSIRQ9H7M9 311 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 ZMAT4Q9H898 229 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 SMCO4Q9NRQ5 59 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 C19orf73Q9NVV2 129 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 GAR1Q9NY12 217 aaKnown RBP7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 TECRQ9NZ01 308 aaKnown RBP7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 GNG13Q9P2W3 67 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 PXMP4Q9Y6I8 212 aa7.96□□□□□ -1.14
SCAMP4-208ENST00000489554 A8MWP6 167 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 TMEM250H0YL14 139 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 NUPL2O15504 423 aaKnown RBP7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 SCGB2A1O75556 95 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 FABP1P07148 127 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 SRP19P09132 144 aaKnown RBP7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 RD3LP0DJH9 198 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 FOLR2P14207 255 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 DEFB114Q30KQ6 69 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 CD300EQ496F6 205 aaPredicted RBP7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 FAM122CQ6P4D5 195 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 ADAMTSL5Q6ZMM2 481 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 S100A7AQ86SG5 101 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 OR1L4Q8NGR5 311 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 TMEM37Q8WXS4 190 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 RAB24Q969Q5 203 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 RCHY1Q96PM5 261 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 PFDN5Q99471 154 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 SCRT1Q9BWW7 348 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 TUBA4BQ9H853 241 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 MRPL27Q9P0M9 148 aaKnown RBP7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 PUS1Q9Y606 427 aaKnown RBP eCLIP7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 ARL2-SNX15V9GYD0 113 aa7.95□□□□□ -1.14
SCAMP4-208ENST00000489554 IGHV3OR16-8A0A075B7F1 116 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 A0A1B0GV50 99 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 ZNF320A2RRD8 509 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 IZUMO1RA6ND01 250 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 NDUFA4O00483 81 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 PDE6DO43924 150 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 ADCYAP1P18509 176 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 EDN2P20800 178 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 CBLN1P23435 193 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 CCL20P78556 96 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 ICAM4Q14773 271 aa7.94□□□□□ -1.14
SCAMP4-208ENST00000489554 MORN5Q5VZ52 161 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms