RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ARRDC1Q8N5I2 433 aa9.78□□□□□ -0.84
UFD1-209ENST00000489406 RRNAD1Q96FB5 475 aaKnown RBP9.78□□□□□ -0.84
UFD1-209ENST00000489406 C20orf144Q9BQM9 153 aa9.78□□□□□ -0.84
UFD1-209ENST00000489406 TM2D2Q9BX73 214 aa9.78□□□□□ -0.84
UFD1-209ENST00000489406 CACNG5Q9UF02 275 aa9.78□□□□□ -0.84
UFD1-209ENST00000489406 CRCT1Q9UGL9 99 aa9.78□□□□□ -0.84
UFD1-209ENST00000489406 TRAV18A0A075B6X5 111 aa9.77□□□□□ -0.85
UFD1-209ENST00000489406 SMIM30A4D0T7 59 aa9.77□□□□□ -0.85
UFD1-209ENST00000489406 MEIS3P1A6NDR6 274 aa9.77□□□□□ -0.85
UFD1-209ENST00000489406 K7EQD1 137 aa9.77□□□□□ -0.85
UFD1-209ENST00000489406 RAB3BP20337 219 aa9.77□□□□□ -0.85
UFD1-209ENST00000489406 TNFSF8P32971 234 aa9.77□□□□□ -0.85
UFD1-209ENST00000489406 SCAND1P57086 179 aa9.77□□□□□ -0.85
UFD1-209ENST00000489406 CD300CQ08708 224 aa9.77□□□□□ -0.85
UFD1-209ENST00000489406 C2orf83Q53S99 150 aa9.77□□□□□ -0.85
UFD1-209ENST00000489406 PARD6GQ9BYG4 376 aaPredicted RBP9.77□□□□□ -0.85
UFD1-209ENST00000489406 HEYLQ9NQ87 328 aaPredicted RBP9.77□□□□□ -0.85
UFD1-209ENST00000489406 GSN-AS1Q9NRJ2 163 aa9.77□□□□□ -0.85
UFD1-209ENST00000489406 PLCXD1Q9NUJ7 323 aa9.77□□□□□ -0.85
UFD1-209ENST00000489406 FKBP14Q9NWM8 211 aa9.77□□□□□ -0.85
UFD1-209ENST00000489406 TRAV1-2A0A0B4J238 106 aa9.76□□□□□ -0.85
UFD1-209ENST00000489406 AKR1C2P52895 323 aa9.76□□□□□ -0.85
UFD1-209ENST00000489406 SLAQ13239 276 aa9.76□□□□□ -0.85
UFD1-209ENST00000489406 OR2F1Q13607 317 aa9.76□□□□□ -0.85
UFD1-209ENST00000489406 FHL2Q14192 279 aa9.76□□□□□ -0.85
UFD1-209ENST00000489406 LINC01556Q5JQF7 62 aa9.76□□□□□ -0.85
UFD1-209ENST00000489406 GFI1BQ5VTD9 330 aa9.76□□□□□ -0.85
UFD1-209ENST00000489406 C9orf47Q6ZRZ4 202 aa9.76□□□□□ -0.85
UFD1-209ENST00000489406 TMEM170AQ8WVE7 144 aa9.76□□□□□ -0.85
UFD1-209ENST00000489406 BAALCQ8WXS3 180 aa9.76□□□□□ -0.85
UFD1-209ENST00000489406 ST6GAL2Q96JF0 529 aa9.76□□□□□ -0.85
UFD1-209ENST00000489406 ZFP92A6NM28 416 aa9.75□□□□□ -0.85
UFD1-209ENST00000489406 GATA2P23769 480 aaPredicted RBP9.75□□□□□ -0.85
UFD1-209ENST00000489406 S100GP29377 79 aa9.75□□□□□ -0.85
UFD1-209ENST00000489406 LINC01600Q96MT4 127 aa9.75□□□□□ -0.85
UFD1-209ENST00000489406 SNRPGP15A8MWD9 76 aa9.74□□□□□ -0.85
UFD1-209ENST00000489406 CIB2O75838 187 aa9.74□□□□□ -0.85
UFD1-209ENST00000489406 PMP2P02689 132 aa9.74□□□□□ -0.85
UFD1-209ENST00000489406 KLF9Q13886 244 aaPredicted RBP9.74□□□□□ -0.85
UFD1-209ENST00000489406 SPARTQ8N0X7 666 aa9.74□□□□□ -0.85
UFD1-209ENST00000489406 THAP8Q8NA92 274 aa9.74□□□□□ -0.85
UFD1-209ENST00000489406 BLNKQ8WV28 456 aa9.74□□□□□ -0.85
UFD1-209ENST00000489406 ACOT13Q9NPJ3 140 aa9.74□□□□□ -0.85
UFD1-209ENST00000489406 FSIP2Q5CZC0 6907 aa9.73□□□□□ -0.85
UFD1-209ENST00000489406 J3KRW8 73 aa9.73□□□□□ -0.85
UFD1-209ENST00000489406 IGHV3-30P01768 117 aa9.73□□□□□ -0.85
UFD1-209ENST00000489406 IGHV3-33P01772 117 aa9.73□□□□□ -0.85
UFD1-209ENST00000489406 IGHV3-30-3P0DP02 117 aa9.73□□□□□ -0.85
UFD1-209ENST00000489406 IGHV3-30-5P0DP03 117 aa9.73□□□□□ -0.85
UFD1-209ENST00000489406 MYL9P24844 172 aa9.73□□□□□ -0.85
UFD1-209ENST00000489406 LINC01559Q495D7 138 aa9.73□□□□□ -0.85
UFD1-209ENST00000489406 PCNPQ8WW12 178 aaKnown RBP9.73□□□□□ -0.85
UFD1-209ENST00000489406 MRPL32Q9BYC8 188 aaKnown RBP9.73□□□□□ -0.85
UFD1-209ENST00000489406 IGKV1D-37A0A075B6S9 117 aa9.72□□□□□ -0.85
UFD1-209ENST00000489406 TRAV12-3A0A0B4J271 114 aa9.72□□□□□ -0.85
UFD1-209ENST00000489406 PTGES3LE9PB15 166 aa9.72□□□□□ -0.85
UFD1-209ENST00000489406 SPCS3P61009 180 aa9.72□□□□□ -0.85
UFD1-209ENST00000489406 C11orf72Q8NBR9 251 aa9.72□□□□□ -0.85
UFD1-209ENST00000489406 OR1B1Q8NGR6 318 aa9.72□□□□□ -0.85
UFD1-209ENST00000489406 KLF12Q9Y4X4 402 aa9.72□□□□□ -0.85
UFD1-209ENST00000489406 A0A0G2JRQ6 117 aa9.71□□□□□ -0.86
UFD1-209ENST00000489406 SPINK4O60575 86 aa9.71□□□□□ -0.86
UFD1-209ENST00000489406 ZFP1Q6P2D0 407 aa9.71□□□□□ -0.86
UFD1-209ENST00000489406 CCDC190Q86UF4 302 aa9.71□□□□□ -0.86
UFD1-209ENST00000489406 HSD17B11Q8NBQ5 300 aa9.71□□□□□ -0.86
UFD1-209ENST00000489406 PYGO2Q9BRQ0 406 aa9.71□□□□□ -0.86
UFD1-209ENST00000489406 AUNIPQ9H7T9 357 aa9.71□□□□□ -0.86
UFD1-209ENST00000489406 IFT46Q9NQC8 304 aa9.71□□□□□ -0.86
UFD1-209ENST00000489406 DIABLOQ9NR28 239 aa9.71□□□□□ -0.86
UFD1-209ENST00000489406 RHBDL2Q9NX52 303 aa9.71□□□□□ -0.86
UFD1-209ENST00000489406 C9JCJ5 164 aa9.7□□□□□ -0.86
UFD1-209ENST00000489406 GNAO1P09471 354 aa9.7□□□□□ -0.86
UFD1-209ENST00000489406 OR4D5Q8NGN0 318 aa9.7□□□□□ -0.86
UFD1-209ENST00000489406 OR5H2Q8NGV7 314 aa9.7□□□□□ -0.86
UFD1-209ENST00000489406 TXNDC17Q9BRA2 123 aa9.7□□□□□ -0.86
UFD1-209ENST00000489406 MRPL16Q9NX20 251 aaKnown RBP9.7□□□□□ -0.86
UFD1-209ENST00000489406 RPH3ALQ9UNE2 315 aa9.7□□□□□ -0.86
UFD1-209ENST00000489406 TRGV4A0A0C4DH28 118 aa9.69□□□□□ -0.86
UFD1-209ENST00000489406 FABP1P07148 127 aa9.69□□□□□ -0.86
UFD1-209ENST00000489406 CXCL3P19876 107 aa9.69□□□□□ -0.86
UFD1-209ENST00000489406 TRIM16LQ309B1 348 aa9.69□□□□□ -0.86
UFD1-209ENST00000489406 LPCAT3Q6P1A2 487 aa9.69□□□□□ -0.86
UFD1-209ENST00000489406 C8orf59Q8N0T1 100 aaPredicted RBP9.69□□□□□ -0.86
UFD1-209ENST00000489406 Q8N976 141 aa9.69□□□□□ -0.86
UFD1-209ENST00000489406 ZNF680Q8NEM1 530 aa9.69□□□□□ -0.86
UFD1-209ENST00000489406 RPUSD4Q96CM3 377 aaKnown RBP9.69□□□□□ -0.86
UFD1-209ENST00000489406 VGLL1Q99990 258 aa9.69□□□□□ -0.86
UFD1-209ENST00000489406 CEBPZOSA8MTT3 80 aa9.68□□□□□ -0.86
UFD1-209ENST00000489406 ATG12O94817 140 aa9.68□□□□□ -0.86
UFD1-209ENST00000489406 MLLT11Q13015 90 aaPredicted RBP9.68□□□□□ -0.86
UFD1-209ENST00000489406 DHRSXQ8N5I4 330 aa9.68□□□□□ -0.86
UFD1-209ENST00000489406 RNASE11Q8TAA1 199 aaKnown RBP9.68□□□□□ -0.86
UFD1-209ENST00000489406 GPR82Q96P67 336 aa9.68□□□□□ -0.86
UFD1-209ENST00000489406 TMEM56-RWDD3S4R434 201 aa9.68□□□□□ -0.86
UFD1-209ENST00000489406 A0A0D9SG52 128 aa9.67□□□□□ -0.86
UFD1-209ENST00000489406 RNF222A6NCQ9 220 aa9.67□□□□□ -0.86
UFD1-209ENST00000489406 KRTAP10-8P60410 259 aa9.67□□□□□ -0.86
UFD1-209ENST00000489406 LAGE3Q14657 143 aa9.67□□□□□ -0.86
UFD1-209ENST00000489406 TP53RKQ96S44 253 aa9.67□□□□□ -0.86
UFD1-209ENST00000489406 SLC25A31Q9H0C2 315 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms