RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 IGHV4-30-2A0A087WSY4 118 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 A0A0U1RQK1 487 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 SERTM2A0A1B0GWG4 89 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 ZNF320A2RRD8 509 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 FBLL1A6NHQ2 334 aaKnown RBP6.67□□□□□ -1.34
VTI1A-207ENST00000489357 K7EIM0 57 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 K7EN84 100 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 NBEAP1P0C6P0 100 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 RD3LP0DJH9 198 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 HIST1H1EP10412 219 aaKnown RBP6.67□□□□□ -1.34
VTI1A-207ENST00000489357 SLC25A16P16260 332 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 RAB9AP51151 201 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 MFAP4P55083 255 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 RPL15P61313 204 aaKnown RBP6.67□□□□□ -1.34
VTI1A-207ENST00000489357 LMO4P61968 165 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 KRTAP1-1Q07627 177 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 LOXL1Q08397 574 aaPredicted RBP6.67□□□□□ -1.34
VTI1A-207ENST00000489357 PDE6HQ13956 83 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 CT83Q5H943 113 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 LDLRAD2Q5SZI1 272 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 NECAP1Q8NC96 275 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 OR1B1Q8NGR6 318 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 VN1R17PQ8TDU5 208 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 PACRGQ96M98 296 aaPredicted RBP6.67□□□□□ -1.34
VTI1A-207ENST00000489357 ELOVL1Q9BW60 279 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 GNB1LQ9BYB4 327 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 OTORQ9NRC9 128 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 MRPL36Q9P0J6 103 aaKnown RBP6.67□□□□□ -1.34
VTI1A-207ENST00000489357 EPDR1Q9UM22 224 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 HILPDAQ9Y5L2 63 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 DMRT1Q9Y5R6 373 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 V9GYV3 84 aa6.67□□□□□ -1.34
VTI1A-207ENST00000489357 FN1P02751 2386 aaKnown RBP6.67□□□□□ -1.34
VTI1A-207ENST00000489357 WI2-2373I1.2A0A1W2PRP0 233 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 SMIM27A0A1W2PRY6 76 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 FAM231BA6NCW3 169 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 FCN1O00602 326 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 IGKV1-17P01599 117 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 IGLV2-8P01709 118 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 PSG1P11464 419 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 TMEM11P17152 192 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 ORM2P19652 201 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 UBE2G1P62253 170 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 CX3CL1P78423 397 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 HES1Q14469 280 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 IBA57Q5T440 356 aaKnown RBP6.66□□□□□ -1.34
VTI1A-207ENST00000489357 MORN5Q5VZ52 161 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 BPIFA4PQ86YQ2 179 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 WIPF2Q8TF74 440 aaPredicted RBP6.66□□□□□ -1.34
VTI1A-207ENST00000489357 GPR82Q96P67 336 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 PIMREGQ9BSJ6 248 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 SHANK2-AS3Q9BTD1 123 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 SLC25A39Q9BZJ4 359 aaPredicted RBP6.66□□□□□ -1.34
VTI1A-207ENST00000489357 TRAPPC1Q9Y5R8 145 aa6.66□□□□□ -1.34
VTI1A-207ENST00000489357 SOX21Q9Y651 276 aaPredicted RBP6.66□□□□□ -1.34
VTI1A-207ENST00000489357 TRAV5A0A0B4J249 113 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 XKRY2A2RUG3 117 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 PGPEP1LA6NFU8 196 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 H3BRN7 92 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 K7EQM0 130 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 ZNF253O75346 499 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 NDUFB8O95169 186 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 HLA-DQA1P01909 254 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 PYYP10082 97 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 ZFP36P26651 326 aaKnown RBP6.65□□□□□ -1.34
VTI1A-207ENST00000489357 KIR3DS1Q14943 382 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 CLEC2AQ6UVW9 174 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 Q71RC1 249 aaPredicted RBP6.65□□□□□ -1.34
VTI1A-207ENST00000489357 ATP5L2Q7Z4Y8 100 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 LHFPL4Q7Z7J7 247 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 BAGE2Q86Y30 109 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 OR5T1Q8NG75 326 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 OR4F17Q8NGA8 305 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 TMEM18Q96B42 140 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 RNF125Q96EQ8 232 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 TBX15Q96SF7 602 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 BPESC1Q9GZL8 116 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 ZNF492Q9P255 531 aa6.65□□□□□ -1.34
VTI1A-207ENST00000489357 JMJD1CQ15652 2540 aa6.65□□□□□ -1.35
VTI1A-207ENST00000489357 IFITM10A6NMD0 228 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 NPFFO15130 113 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 GNG7O60262 68 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 BRI3O95415 125 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 LTAP01374 205 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 TCRAP04437 139 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 SLC25A5P05141 298 aaKnown RBP6.64□□□□□ -1.35
VTI1A-207ENST00000489357 ESDP10768 282 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 GATA3P23771 443 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 CRIP2P52943 208 aaPredicted RBP6.64□□□□□ -1.35
VTI1A-207ENST00000489357 DLX1P56177 255 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 RIPPLY3P57055 190 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 PAX8Q06710 450 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 KLRD1Q13241 179 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 ZNF600Q6ZNG1 722 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 ZNF491Q8N8L2 437 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 Q8N9W7 124 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 OR5R1Q8NH85 324 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 FAM110DQ8TAY7 271 aaPredicted RBP6.64□□□□□ -1.35
VTI1A-207ENST00000489357 HIST1H2BLQ99880 126 aa6.64□□□□□ -1.35
VTI1A-207ENST00000489357 MLST8Q9BVC4 326 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms