RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 CLECL1Q8IZS7 167 aa1.56□□□□□ -2.16
XRN1-213ENST00000489241 BORCS8Q96FH0 119 aa1.56□□□□□ -2.16
XRN1-213ENST00000489241 CCDC32Q9BV29 185 aa1.56□□□□□ -2.16
XRN1-213ENST00000489241 LY96Q9Y6Y9 160 aa1.56□□□□□ -2.16
XRN1-213ENST00000489241 UNC13AQ9UPW8 1703 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 TRDV1A0A1B0GX56 115 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 E7EQ34 232 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 HCRTO43612 131 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 HIST1H2BKO60814 126 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 PFDN1O60925 122 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 IGLV1-51P01701 117 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 HIST1H2BJP06899 126 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 HBBP68871 147 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 PHF5AQ7RTV0 110 aaKnown RBP1.55□□□□□ -2.16
XRN1-213ENST00000489241 CROCCP2Q86T23 111 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 OR4K15Q8NH41 348 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 GRPEL2Q8TAA5 225 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 EFCAB11Q9BUY7 163 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 OR2H1Q9GZK4 316 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 CACYBPQ9HB71 228 aaKnown RBP1.55□□□□□ -2.16
XRN1-213ENST00000489241 MYH7BA7E2Y1 1941 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 DOCK4Q8N1I0 1966 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 NCAPD3P42695 1498 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 ARHGEF11O15085 1522 aa1.55□□□□□ -2.16
XRN1-213ENST00000489241 CR1P17927 2039 aa1.54□□□□□ -2.16
XRN1-213ENST00000489241 IGKV2D-26A0A0A0MRZ7 120 aa1.54□□□□□ -2.16
XRN1-213ENST00000489241 TRBV6-8A0A0A6YYG3 113 aa1.54□□□□□ -2.16
XRN1-213ENST00000489241 H3BQV1 296 aa1.54□□□□□ -2.16
XRN1-213ENST00000489241 RER1O15258 196 aa1.54□□□□□ -2.16
XRN1-213ENST00000489241 HYPMO75409 117 aa1.54□□□□□ -2.16
XRN1-213ENST00000489241 AKAP14Q86UN6 197 aa1.54□□□□□ -2.16
XRN1-213ENST00000489241 OR5D16Q8NGK9 328 aa1.54□□□□□ -2.16
XRN1-213ENST00000489241 TMEM254Q8TBM7 123 aa1.54□□□□□ -2.16
XRN1-213ENST00000489241 POP5Q969H6 163 aaKnown RBP1.54□□□□□ -2.16
XRN1-213ENST00000489241 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
XRN1-213ENST00000489241 CHCHD2Q9Y6H1 151 aaPredicted RBP1.54□□□□□ -2.16
XRN1-213ENST00000489241 ANKRD30AQ9BXX3 1397 aa1.54□□□□□ -2.16
XRN1-213ENST00000489241 MICAL3Q7RTP6 2002 aa1.54□□□□□ -2.16
XRN1-213ENST00000489241 IGKV3D-7A0A0C4DH55 119 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 IGKV3OR2-268A0A0C4DH90 116 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 TCRBV4S1A1TA0A5B7 111 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 PRORSD1PA6NEY8 169 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 GABARAPH6UMI1 98 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 CST7O76096 145 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 OR10J4P0C629 311 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 NBEAP1P0C6P0 100 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 CNBPP62633 177 aaKnown RBP1.53□□□□□ -2.16
XRN1-213ENST00000489241 KLRD1Q13241 179 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 TMEM128Q5BJH2 165 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 C1orf134Q5TEV5 83 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 TOMM20LQ6UXN7 152 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 DEFB119Q8N690 84 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 Q8N814 137 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 ST6GALNAC3Q8NDV1 305 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 OR5D14Q8NGL3 314 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 THEM6Q8WUY1 208 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 CHCHD1Q96BP2 118 aaKnown RBP1.53□□□□□ -2.16
XRN1-213ENST00000489241 ISOC1Q96CN7 298 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 LRTM1Q9HBL6 345 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 NAT8BQ9UHF3 227 aa1.53□□□□□ -2.16
XRN1-213ENST00000489241 HEATR5BQ9P2D3 2071 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 ANAPC1Q9H1A4 1944 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 MYH2Q9UKX2 1941 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 TAF1LQ8IZX4 1826 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 ZCCHC11Q5TAX3 1644 aaKnown RBP1.52□□□□□ -2.17
XRN1-213ENST00000489241 E7EUB6 86 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 C17orf112F2Z3M2 114 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 IFNA4P05014 189 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 BCL2P10415 239 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 S100GP29377 79 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 S100A11P31949 105 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 ZNF93P35789 620 aaPredicted RBP1.52□□□□□ -2.17
XRN1-213ENST00000489241 RPL35P42766 123 aaKnown RBP1.52□□□□□ -2.17
XRN1-213ENST00000489241 DSCR4P56555 118 aaPredicted RBP1.52□□□□□ -2.17
XRN1-213ENST00000489241 SAMD13Q5VXD3 122 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 HRCT1Q6UXD1 115 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 C4orf22Q6V702 233 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 ANGPTL5Q86XS5 388 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 RASL12Q9NYN1 266 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 KLK9Q9UKQ9 250 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 SCN8AQ9UQD0 1980 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 MYH3P11055 1940 aa1.52□□□□□ -2.17
XRN1-213ENST00000489241 TRPM1Q7Z4N2 1603 aa1.51□□□□□ -2.17
XRN1-213ENST00000489241 IGKV2-29A2NJV5 120 aaPredicted RBP1.51□□□□□ -2.17
XRN1-213ENST00000489241 CCDC160A6NGH7 325 aa1.51□□□□□ -2.17
XRN1-213ENST00000489241 ZNF736B4DX44 427 aaPredicted RBP1.51□□□□□ -2.17
XRN1-213ENST00000489241 TSTD3H0UI37 97 aa1.51□□□□□ -2.17
XRN1-213ENST00000489241 M0R233 179 aa1.51□□□□□ -2.17
XRN1-213ENST00000489241 RPL7P18124 248 aaKnown RBP1.51□□□□□ -2.17
XRN1-213ENST00000489241 RAB5CP51148 216 aa1.51□□□□□ -2.17
XRN1-213ENST00000489241 POLR2HP52434 150 aaKnown RBP1.51□□□□□ -2.17
XRN1-213ENST00000489241 TEX261Q6UWH6 196 aa1.51□□□□□ -2.17
XRN1-213ENST00000489241 ANP32BQ92688 251 aaKnown RBP1.51□□□□□ -2.17
XRN1-213ENST00000489241 LAMTOR2Q9Y2Q5 125 aa1.51□□□□□ -2.17
XRN1-213ENST00000489241 U3KQ87 197 aa1.51□□□□□ -2.17
XRN1-213ENST00000489241 TRAPPC8Q9Y2L5 1435 aa1.5□□□□□ -2.17
XRN1-213ENST00000489241 TRAV10A0A0B4J240 114 aa1.5□□□□□ -2.17
XRN1-213ENST00000489241 CDK6Q00534 326 aa1.5□□□□□ -2.17
XRN1-213ENST00000489241 EIF3IQ13347 325 aaKnown RBP1.5□□□□□ -2.17
XRN1-213ENST00000489241 RAB37Q96AX2 223 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms