RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ANGPTL5Q86XS5 388 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 Q8N2B8 174 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 OR4K15Q8NH41 348 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 CACYBPQ9HB71 228 aaKnown RBP1.08□□□□□ -2.24
RFC4-213ENST00000489028 MRPL40Q9NQ50 206 aaKnown RBP1.08□□□□□ -2.24
RFC4-213ENST00000489028 ARHGEF28Q8N1W1 1705 aaKnown RBP1.08□□□□□ -2.24
RFC4-213ENST00000489028 CCDC88CQ9P219 2028 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 KMT2BQ9UMN6 2715 aaPredicted RBP1.08□□□□□ -2.24
RFC4-213ENST00000489028 CR1P17927 2039 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 STRCQ7RTU9 1775 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 IGKV2-40A0A087WW87 121 aaPredicted RBP1.07□□□□□ -2.24
RFC4-213ENST00000489028 TCRBV4S1A1TA0A5B7 111 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 TSTD3H0UI37 97 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 IGKV2D-40P01614 121 aaPredicted RBP1.07□□□□□ -2.24
RFC4-213ENST00000489028 CXCL1P09341 107 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 BCL2P10415 239 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 S100GP29377 79 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 RPL35P42766 123 aaKnown RBP1.07□□□□□ -2.24
RFC4-213ENST00000489028 RAB5CP51148 216 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 ARPP19P56211 112 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 ROMO1P60602 79 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 HBBP68871 147 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 KLRD1Q13241 179 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 SURF2Q15527 256 aaPredicted RBP1.07□□□□□ -2.24
RFC4-213ENST00000489028 DEFB113Q30KQ7 82 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 C1orf137Q5JT78 98 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 TOMM20LQ6UXN7 152 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 C4orf22Q6V702 233 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 TAC4Q86UU9 113 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 Q8IYB0 196 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 CLECL1Q8IZS7 167 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 OR5D14Q8NGL3 314 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 BORCS8Q96FH0 119 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 TP53RKQ96S44 253 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 RETNLBQ9BQ08 111 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 KLK9Q9UKQ9 250 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 SBF1O95248 1867 aa1.07□□□□□ -2.24
RFC4-213ENST00000489028 CEP164Q9UPV0 1460 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 OBSL1O75147 1896 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 IGKV3-7A0A075B6H7 116 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 A0A087WX48 190 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 ODAMA1E959 279 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 RER1O15258 196 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 DSCR4P56555 118 aaPredicted RBP1.06□□□□□ -2.24
RFC4-213ENST00000489028 MSMO1Q15800 293 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 SAMD13Q5VXD3 122 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 PATE2Q6UY27 113 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 PHF5AQ7RTV0 110 aaKnown RBP1.06□□□□□ -2.24
RFC4-213ENST00000489028 AKAP14Q86UN6 197 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 PRR15Q8IV56 129 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 ST6GALNAC3Q8NDV1 305 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 GRPEL2Q8TAA5 225 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 ZNF431Q8TF32 576 aaPredicted RBP1.06□□□□□ -2.24
RFC4-213ENST00000489028 SKA2Q8WVK7 121 aaPredicted RBP1.06□□□□□ -2.24
RFC4-213ENST00000489028 CHCHD1Q96BP2 118 aaKnown RBP1.06□□□□□ -2.24
RFC4-213ENST00000489028 EFCAB11Q9BUY7 163 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 OR2H1Q9GZK4 316 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 TCEAL2Q9H3H9 227 aaPredicted RBP1.06□□□□□ -2.24
RFC4-213ENST00000489028 PBRM1Q86U86 1689 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 HEATR5BQ9P2D3 2071 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 MED12LQ86YW9 2145 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 KDM6AO15550 1401 aaPredicted RBP1.06□□□□□ -2.24
RFC4-213ENST00000489028 CD109Q6YHK3 1445 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 ALPK2Q86TB3 2170 aa1.06□□□□□ -2.24
RFC4-213ENST00000489028 DENND4CQ5VZ89 1909 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 TRBV6-8A0A0A6YYG3 113 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 TRDV1A0A1B0GX56 115 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 OR2T8A6NH00 312 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 M0R233 179 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 NDUFA6P56556 154 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 CDK6Q00534 326 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 EIF3IQ13347 325 aaKnown RBP1.05□□□□□ -2.24
RFC4-213ENST00000489028 TMEM128Q5BJH2 165 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 TEX261Q6UWH6 196 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 C15orf53Q8NAA6 179 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 OR9Q1Q8NGQ5 310 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 THEM6Q8WUY1 208 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 RMND5BQ96G75 393 aaPredicted RBP1.05□□□□□ -2.24
RFC4-213ENST00000489028 MCEEQ96PE7 176 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 SPANXA1Q9NS26 97 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 NAT8BQ9UHF3 227 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 RNF11Q9Y3C5 154 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 HSPB11Q9Y547 144 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 U3KQ87 197 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 TAF1LQ8IZX4 1826 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 TNS3Q68CZ2 1445 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 ANAPC1Q9H1A4 1944 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 PCDH15Q96QU1 1955 aa1.05□□□□□ -2.24
RFC4-213ENST00000489028 ZCCHC11Q5TAX3 1644 aaKnown RBP1.04□□□□□ -2.24
RFC4-213ENST00000489028 UNC13AQ9UPW8 1703 aa1.04□□□□□ -2.24
RFC4-213ENST00000489028 TRAV10A0A0B4J240 114 aa1.04□□□□□ -2.24
RFC4-213ENST00000489028 CCDC160A6NGH7 325 aa1.04□□□□□ -2.24
RFC4-213ENST00000489028 ZNF736B4DX44 427 aaPredicted RBP1.04□□□□□ -2.24
RFC4-213ENST00000489028 E7EUB6 86 aa1.04□□□□□ -2.24
RFC4-213ENST00000489028 K7ERJ3 54 aa1.04□□□□□ -2.24
RFC4-213ENST00000489028 KPNA4O00629 521 aaPredicted RBP1.04□□□□□ -2.24
RFC4-213ENST00000489028 LYRM1O43325 122 aa1.04□□□□□ -2.24
RFC4-213ENST00000489028 HCRTO43612 131 aa1.04□□□□□ -2.24
RFC4-213ENST00000489028 ERC2-IT1O76042 136 aa1.04□□□□□ -2.24
RFC4-213ENST00000489028 FABP2P12104 132 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms