RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 PSMB11A5LHX3 300 aa8.5□□□□□ -1.05
COL21A1-211ENST00000488912 OR2T8A6NH00 312 aa8.5□□□□□ -1.05
COL21A1-211ENST00000488912 TRGV3P03979 118 aa8.5□□□□□ -1.05
COL21A1-211ENST00000488912 SRP19P09132 144 aaKnown RBP8.5□□□□□ -1.05
COL21A1-211ENST00000488912 SCGB2A2Q13296 93 aa8.5□□□□□ -1.05
COL21A1-211ENST00000488912 ZNF329Q86UD4 541 aa8.5□□□□□ -1.05
COL21A1-211ENST00000488912 ZNF502Q8TBZ5 544 aa8.5□□□□□ -1.05
COL21A1-211ENST00000488912 TRAV1-1A0A0B4J248 108 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 A0A1W2PPV4 95 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 RBFOX3A6NFN3 312 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 IGLV1-40P01703 118 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 PSG1P11464 419 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 TPPP2P59282 170 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 SPATA31B1PQ5VZV4 182 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 TMEM37Q8WXS4 190 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 FAM210BQ96KR6 192 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 CCDC140Q96MF4 163 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 FAM223BA6NKX1 122 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 B4DEV8 164 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 INAFM1C9JVW0 142 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 H3BUA1 57 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 HBE1P02100 147 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 PF4V1P10720 104 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 FCGR2BP31994 310 aaPredicted RBP8.49□□□□□ -1.05
COL21A1-211ENST00000488912 FAM78BQ5VT40 261 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 C10orf99Q6UWK7 81 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 LCNL1Q6ZST4 164 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 FAM223AQ8IWN6 122 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 KLK15Q9H2R5 256 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 TMEM242Q9NWH2 141 aa8.49□□□□□ -1.05
COL21A1-211ENST00000488912 F8P00451 2351 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 TRBV24-1A0A075B6N3 115 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 BRI3O95415 125 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 GPR183P32249 361 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 RHOBP62745 196 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 ATP5G2Q06055 141 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 IQCJQ1A5X6 159 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 Q8N2B8 174 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 UHRF2Q96PU4 802 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 TXN2Q99757 166 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 URGCP-MRPS24S4R325 110 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 FN1P02751 2386 aaKnown RBP8.48□□□□□ -1.05
COL21A1-211ENST00000488912 TRAV30A0A087WSZ9 112 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 ZNF705GA8MUZ8 300 aaPredicted RBP8.48□□□□□ -1.05
COL21A1-211ENST00000488912 COX7A2P2O60397 106 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 CTSGP08311 255 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 OR5G3P0C626 314 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 ORM2P19652 201 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 TEX38Q6PEX7 206 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 PATE2Q6UY27 113 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 MIR17HGQ75NE6 70 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 OR1B1Q8NGR6 318 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 EEF1AKMT3Q96AZ1 226 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 TVP23CQ96ET8 276 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 CHRDL1Q9BU40 450 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 DNAJC4Q9NNZ3 241 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 FUT9Q9Y231 359 aa8.48□□□□□ -1.05
COL21A1-211ENST00000488912 CLDN34H7C241 214 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 K7EP13 123 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 TOMM40O96008 361 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 IGHG4P01861 327 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 ADMP35318 185 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 ICAM4Q14773 271 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 MORN5Q5VZ52 161 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 C10orf113Q5VZT2 155 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 CLEC19AQ6UXS0 136 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 GATAD1Q8WUU5 269 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 TRBV7-1A0A0A6YYK4 115 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 CYSRT1A8MQ03 144 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 CLEC3BP05452 202 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 STAG3L2P0CL84 134 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 STAG3L3P0CL85 134 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 ARL14EPLP0DKL9 152 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 PSMB8P28062 276 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 RAB9AP51151 201 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 YPEL3P61236 119 aaPredicted RBP8.47□□□□□ -1.05
COL21A1-211ENST00000488912 LYZP61626 148 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 OR51G1Q8NGK1 321 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 OR1L4Q8NGR5 311 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 RNASE8Q8TDE3 154 aaKnown RBP8.47□□□□□ -1.05
COL21A1-211ENST00000488912 ZNF418Q8TF45 676 aaPredicted RBP8.47□□□□□ -1.05
COL21A1-211ENST00000488912 C19orf24Q9BVV8 132 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 SERTAD4Q9NUC0 356 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 ZFP30Q9Y2G7 519 aa8.47□□□□□ -1.05
COL21A1-211ENST00000488912 HSPB1P04792 205 aaKnown RBP8.46□□□□□ -1.05
COL21A1-211ENST00000488912 RNASE1P07998 156 aaKnown RBP8.46□□□□□ -1.05
COL21A1-211ENST00000488912 HILS1P60008 231 aa8.46□□□□□ -1.05
COL21A1-211ENST00000488912 PLP1P60201 277 aa8.46□□□□□ -1.05
COL21A1-211ENST00000488912 ZNF506Q5JVG8 444 aa8.46□□□□□ -1.05
COL21A1-211ENST00000488912 Q6ZSV7 163 aa8.46□□□□□ -1.05
COL21A1-211ENST00000488912 USMG5Q96IX5 58 aa8.46□□□□□ -1.05
COL21A1-211ENST00000488912 GNG13Q9P2W3 67 aa8.46□□□□□ -1.05
COL21A1-211ENST00000488912 IGHV3-35A0A0C4DH35 117 aa8.46□□□□□ -1.06
COL21A1-211ENST00000488912 PPP5D1E7EU14 171 aa8.46□□□□□ -1.06
COL21A1-211ENST00000488912 HYPMO75409 117 aa8.46□□□□□ -1.06
COL21A1-211ENST00000488912 IGHV3-11P01762 117 aa8.46□□□□□ -1.06
COL21A1-211ENST00000488912 IL4P05112 153 aa8.46□□□□□ -1.06
COL21A1-211ENST00000488912 LINC00305Q7Z4B0 112 aa8.46□□□□□ -1.06
COL21A1-211ENST00000488912 ZNF491Q8N8L2 437 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms