RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 FAM162BQ5T6X4 162 aa13.03□□□□□ -0.32
MCF2L-229ENST00000488765 ABHD17BQ5VST6 288 aa13.03□□□□□ -0.32
MCF2L-229ENST00000488765 DEFB127Q9H1M4 99 aa13.03□□□□□ -0.32
MCF2L-229ENST00000488765 hADV38S2A0JD32 116 aa13.03□□□□□ -0.32
MCF2L-229ENST00000488765 RBPMS2Q6ZRY4 209 aaKnown RBP13.03□□□□□ -0.32
MCF2L-229ENST00000488765 PSG8Q9UQ74 426 aa13.03□□□□□ -0.32
MCF2L-229ENST00000488765 FAM90A27PA6NNH2 459 aa13.03□□□□□ -0.32
MCF2L-229ENST00000488765 NPIPB3Q92617 1050 aa13.03□□□□□ -0.32
MCF2L-229ENST00000488765 ZNF414Q96IQ9 312 aa13.03□□□□□ -0.32
MCF2L-229ENST00000488765 A0A096LNJ9 63 aa13.02□□□□□ -0.32
MCF2L-229ENST00000488765 NPIPB6E9PJ23 425 aa13.02□□□□□ -0.32
MCF2L-229ENST00000488765 MAGEA5P43359 124 aa13.02□□□□□ -0.32
MCF2L-229ENST00000488765 ITLN1Q8WWA0 313 aa13.02□□□□□ -0.32
MCF2L-229ENST00000488765 ZNF479Q96JC4 524 aa13.02□□□□□ -0.32
MCF2L-229ENST00000488765 UFC1Q9Y3C8 167 aa13.02□□□□□ -0.32
MCF2L-229ENST00000488765 IGKV1-16P04430 117 aa13.02□□□□□ -0.33
MCF2L-229ENST00000488765 GAGE13Q4V321 117 aa13.02□□□□□ -0.33
MCF2L-229ENST00000488765 TMEM164Q5U3C3 297 aa13.02□□□□□ -0.33
MCF2L-229ENST00000488765 C10orf113Q5VZT2 155 aa13.02□□□□□ -0.33
MCF2L-229ENST00000488765 LINC00305Q7Z4B0 112 aa13.02□□□□□ -0.33
MCF2L-229ENST00000488765 ZNRF1Q8ND25 227 aa13.02□□□□□ -0.33
MCF2L-229ENST00000488765 ZNF418Q8TF45 676 aaPredicted RBP13.02□□□□□ -0.33
MCF2L-229ENST00000488765 EPDR1Q9UM22 224 aa13.02□□□□□ -0.33
MCF2L-229ENST00000488765 WNK2Q9Y3S1 2297 aa13.02□□□□□ -0.33
MCF2L-229ENST00000488765 D6R8Y8 96 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 PRRG2O14669 202 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 APOMO95445 188 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 ZNF146Q15072 292 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 MDP1Q86V88 176 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 MRPL16Q9NX20 251 aaKnown RBP13.01□□□□□ -0.33
MCF2L-229ENST00000488765 C15orf61A6NNL5 157 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 ERVK11-1P61568 191 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 SRSF6Q13247 344 aaKnown RBP13.01□□□□□ -0.33
MCF2L-229ENST00000488765 FAM231DQ6ZW35 169 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 ATP5L2Q7Z4Y8 100 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 PDPNQ86YL7 162 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 SMIM20Q8N5G0 67 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 GPR82Q96P67 336 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 PKIBQ9C010 78 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 RALYQ9UKM9 306 aaKnown RBP13.01□□□□□ -0.33
MCF2L-229ENST00000488765 A0A1W2PNU3 283 aaPredicted RBP13.01□□□□□ -0.33
MCF2L-229ENST00000488765 TMEM189A5PLL7 270 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 PATE2Q6UY27 113 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 TMEM178AQ8NBL3 297 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 SPATA25Q9BR10 227 aa13.01□□□□□ -0.33
MCF2L-229ENST00000488765 C8orf86Q6ZUL3 223 aa13□□□□□ -0.33
MCF2L-229ENST00000488765 RBMXL3Q8N7X1 1067 aaKnown RBP13□□□□□ -0.33
MCF2L-229ENST00000488765 OSR1Q8TAX0 266 aaPredicted RBP13□□□□□ -0.33
MCF2L-229ENST00000488765 NDFIP1Q9BT67 221 aa13□□□□□ -0.33
MCF2L-229ENST00000488765 CHAC1Q9BUX1 264 aa13□□□□□ -0.33
MCF2L-229ENST00000488765 C7orf69Q9H7B7 122 aa13□□□□□ -0.33
MCF2L-229ENST00000488765 C10orf55Q5SWW7 151 aa13□□□□□ -0.33
MCF2L-229ENST00000488765 PEAR1Q5VY43 1037 aaPredicted RBP13□□□□□ -0.33
MCF2L-229ENST00000488765 TCRBV4S1A1TA0A5B7 111 aa13□□□□□ -0.33
MCF2L-229ENST00000488765 E7EUB6 86 aa13□□□□□ -0.33
MCF2L-229ENST00000488765 XGP55808 180 aa13□□□□□ -0.33
MCF2L-229ENST00000488765 RUSC1-AS1Q66K80 236 aa13□□□□□ -0.33
MCF2L-229ENST00000488765 AMN1Q8IY45 258 aa13□□□□□ -0.33
MCF2L-229ENST00000488765 OR4X2Q8NGF9 303 aa13□□□□□ -0.33
MCF2L-229ENST00000488765 MRPL36Q9P0J6 103 aaKnown RBP13□□□□□ -0.33
MCF2L-229ENST00000488765 TRBV20-1A0A075B6N2 111 aa12.99□□□□□ -0.33
MCF2L-229ENST00000488765 TMEM213A2RRL7 107 aa12.99□□□□□ -0.33
MCF2L-229ENST00000488765 C19orf67A6NJJ6 358 aa12.99□□□□□ -0.33
MCF2L-229ENST00000488765 SRRM4A7MD48 611 aaKnown RBP12.99□□□□□ -0.33
MCF2L-229ENST00000488765 FHL3Q13643 280 aa12.99□□□□□ -0.33
MCF2L-229ENST00000488765 FAM201AQ5SY85 155 aa12.99□□□□□ -0.33
MCF2L-229ENST00000488765 EXOC3-AS1Q8N2X6 119 aa12.99□□□□□ -0.33
MCF2L-229ENST00000488765 FER1L6-AS2Q96M78 137 aa12.99□□□□□ -0.33
MCF2L-229ENST00000488765 ANAPC13Q9BS18 74 aa12.99□□□□□ -0.33
MCF2L-229ENST00000488765 SIGLEC8Q9NYZ4 499 aa12.99□□□□□ -0.33
MCF2L-229ENST00000488765 FOXI2Q6ZQN5 318 aa12.99□□□□□ -0.33
MCF2L-229ENST00000488765 C3orf56Q8N813 242 aa12.99□□□□□ -0.33
MCF2L-229ENST00000488765 COL25A1Q9BXS0 654 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-229ENST00000488765 AKAP13Q12802 2813 aa12.98□□□□□ -0.33
MCF2L-229ENST00000488765 MPV17P39210 176 aa12.98□□□□□ -0.33
MCF2L-229ENST00000488765 OR9G4Q8NGQ1 327 aa12.98□□□□□ -0.33
MCF2L-229ENST00000488765 IGLL5B9A064 214 aa12.98□□□□□ -0.33
MCF2L-229ENST00000488765 PRSS1P07477 247 aa12.98□□□□□ -0.33
MCF2L-229ENST00000488765 FXYD5Q96DB9 178 aa12.98□□□□□ -0.33
MCF2L-229ENST00000488765 ANKRD11Q6UB99 2663 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-229ENST00000488765 ZZEF1O43149 2961 aa12.98□□□□□ -0.33
MCF2L-229ENST00000488765 GOLT1AQ6ZVE7 132 aa12.98□□□□□ -0.33
MCF2L-229ENST00000488765 PRSS29PA6NIE9 313 aa12.97□□□□□ -0.33
MCF2L-229ENST00000488765 TCTEX1D4Q5JR98 221 aa12.97□□□□□ -0.33
MCF2L-229ENST00000488765 IFI27L1Q96BM0 104 aa12.97□□□□□ -0.33
MCF2L-229ENST00000488765 CACNA1BQ00975 2339 aa12.96□□□□□ -0.33
MCF2L-229ENST00000488765 F8W1H4 67 aa12.96□□□□□ -0.33
MCF2L-229ENST00000488765 ZNF766Q5HY98 468 aa12.96□□□□□ -0.33
MCF2L-229ENST00000488765 TRBV25-1A0A075B6N4 114 aa12.96□□□□□ -0.33
MCF2L-229ENST00000488765 TMEM160Q9NX00 188 aa12.96□□□□□ -0.33
MCF2L-229ENST00000488765 A0A1B0GUT8 65 aa12.96□□□□□ -0.34
MCF2L-229ENST00000488765 SAA2P0DJI9 122 aaPredicted RBP12.96□□□□□ -0.34
MCF2L-229ENST00000488765 CCL11P51671 97 aa12.96□□□□□ -0.34
MCF2L-229ENST00000488765 C1orf122Q6ZSJ8 110 aa12.96□□□□□ -0.34
MCF2L-229ENST00000488765 NFE4Q86UQ8 179 aa12.96□□□□□ -0.34
MCF2L-229ENST00000488765 CD177Q8N6Q3 437 aa12.96□□□□□ -0.34
MCF2L-229ENST00000488765 WISP2O76076 250 aa12.95□□□□□ -0.34
MCF2L-229ENST00000488765 CDIP1Q9H305 208 aa12.95□□□□□ -0.34
MCF2L-229ENST00000488765 C3orf36Q3SXR2 165 aa12.95□□□□□ -0.34
MCF2L-229ENST00000488765 IFI27L2Q9H2X8 130 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms