RNA–Protein interactions for RNA: ENST00000488471.1

KIF3A-207, Transcript of kinesin family member 3A, humanhuman

TSL 2

Gene KIF3A, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-207ENST00000488471 RPL28P46779 137 aaKnown RBP2.16□□□□□ -2.06
KIF3A-207ENST00000488471 EIF2B2P49770 351 aaKnown RBP2.16□□□□□ -2.06
KIF3A-207ENST00000488471 SUPT4H1P63272 117 aaKnown RBP2.16□□□□□ -2.06
KIF3A-207ENST00000488471 BTG2P78543 158 aa2.16□□□□□ -2.06
KIF3A-207ENST00000488471 FAM229BQ4G0N7 80 aa2.16□□□□□ -2.06
KIF3A-207ENST00000488471 MEIG1Q5JSS6 88 aa2.16□□□□□ -2.06
KIF3A-207ENST00000488471 C7orf65Q6ZTY9 151 aa2.16□□□□□ -2.06
KIF3A-207ENST00000488471 Q8NDZ9 215 aa2.16□□□□□ -2.06
KIF3A-207ENST00000488471 NAA38Q9BRA0 125 aaKnown RBP2.16□□□□□ -2.06
KIF3A-207ENST00000488471 SPANXDQ9BXN6 97 aa2.16□□□□□ -2.06
KIF3A-207ENST00000488471 NHP2Q9NX24 153 aaKnown RBP2.16□□□□□ -2.06
KIF3A-207ENST00000488471 DOCK6Q96HP0 2047 aa2.16□□□□□ -2.06
KIF3A-207ENST00000488471 ANKRD12Q6UB98 2062 aa2.16□□□□□ -2.06
KIF3A-207ENST00000488471 TICRRQ7Z2Z1 1910 aa2.15□□□□□ -2.06
KIF3A-207ENST00000488471 NCAPD3P42695 1498 aa2.15□□□□□ -2.06
KIF3A-207ENST00000488471 CEP164Q9UPV0 1460 aa2.15□□□□□ -2.06
KIF3A-207ENST00000488471 LTBP1Q14766 1721 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 IGLV4-60A0A075B6I1 120 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.15□□□□□ -2.07
KIF3A-207ENST00000488471 A0A0G2JMM0 328 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 A0A1W2PPB8 328 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 TMEM218A2RU14 115 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 KIR3DP1A8MWS1 328 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 CCL25O15444 150 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 WISP3O95389 354 aaPredicted RBP2.15□□□□□ -2.07
KIF3A-207ENST00000488471 PYYP10082 97 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 COX6A1P12074 109 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 FXYD2P54710 66 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 DYNLT1P63172 113 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 MRPS36P82909 103 aaKnown RBP2.15□□□□□ -2.07
KIF3A-207ENST00000488471 RELAQ04206 551 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 KHDC3LQ587J8 217 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 LCN15Q6UWW0 184 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 IZUMO2Q6UXV1 221 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 PATE2Q6UY27 113 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 SOSTDC1Q6X4U4 206 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 ATOH7Q8N100 152 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 LINC00311Q8N616 119 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 C1orf64Q8NEQ6 169 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 SNRNP25Q9BV90 132 aaKnown RBP2.15□□□□□ -2.07
KIF3A-207ENST00000488471 DUSP21Q9H596 190 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 COMMD3Q9UBI1 195 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 TIMM9Q9Y5J7 89 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 MPC1Q9Y5U8 109 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 S4R3C0 116 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 OTOFQ9HC10 1997 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 RALGAPA2Q2PPJ7 1873 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 ARID1AO14497 2285 aa2.15□□□□□ -2.07
KIF3A-207ENST00000488471 MED1Q15648 1581 aaPredicted RBP2.15□□□□□ -2.07
KIF3A-207ENST00000488471 NLRC5Q86WI3 1866 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 TOPBP1Q92547 1522 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 IGLV3-9A0A075B6K5 115 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 TRAV7A0A075B6U4 112 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 TRAV30A0A087WSZ9 112 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 C16orf90A8MZG2 172 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 SDCBPO00560 298 aaPredicted RBP2.14□□□□□ -2.07
KIF3A-207ENST00000488471 SNAPC5O75971 98 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 TRGC1P0CF51 173 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 ZNF705BP0CI00 300 aaPredicted RBP2.14□□□□□ -2.07
KIF3A-207ENST00000488471 TPT1P13693 172 aaKnown RBP2.14□□□□□ -2.07
KIF3A-207ENST00000488471 HIST1H1DP16402 221 aaKnown RBP2.14□□□□□ -2.07
KIF3A-207ENST00000488471 ZNF93P35789 620 aaPredicted RBP2.14□□□□□ -2.07
KIF3A-207ENST00000488471 FOXF1Q12946 379 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 FAM216BQ8N7L0 139 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 FGF13Q92913 245 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 DPH3Q96FX2 82 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 SAR1AQ9NR31 198 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 IER3IP1Q9Y5U9 82 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 ADGBQ8N7X0 1667 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 ERBINQ96RT1 1412 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 DOCK8Q8NF50 2099 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 XIRP1Q702N8 1843 aaKnown RBP2.14□□□□□ -2.07
KIF3A-207ENST00000488471 SPEF2Q9C093 1822 aa2.14□□□□□ -2.07
KIF3A-207ENST00000488471 TCOF1Q13428 1488 aaKnown RBP2.14□□□□□ -2.07
KIF3A-207ENST00000488471 COL18A1P39060 1754 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 IGHV3OR16-8A0A075B7F1 116 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 TRGV5A0A0B4J1U4 118 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 TRBV10-2A0A0K0K1G8 114 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 A0A1B0GU33 70 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 SPAARA0A1B0GVQ0 90 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 H7C2G1 150 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 HIST1H1BP16401 226 aaKnown RBP2.13□□□□□ -2.07
KIF3A-207ENST00000488471 CDK6Q00534 326 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 KLRD1Q13241 179 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 CDK5R1Q15078 307 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 PABPC1L2AQ5JQF8 200 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 LYZL1Q6UWQ5 148 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 GTF2H5Q6ZYL4 71 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 Q8NAQ8 132 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 WFDC11Q8NEX6 87 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 MRPS24Q96EL2 167 aaKnown RBP2.13□□□□□ -2.07
KIF3A-207ENST00000488471 CIB3Q96Q77 187 aaPredicted RBP2.13□□□□□ -2.07
KIF3A-207ENST00000488471 MRPL57Q9BQC6 102 aaKnown RBP2.13□□□□□ -2.07
KIF3A-207ENST00000488471 LINC00467Q9BRT7 94 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 BCL2L10Q9HD36 194 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 DNAJC15Q9Y5T4 150 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 ZNF609O15014 1411 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 MBD5Q9P267 1494 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 TRIOBPQ9H2D6 2365 aa2.13□□□□□ -2.07
KIF3A-207ENST00000488471 KIF13BQ9NQT8 1826 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms