RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 GDF5OSQ5U4N7 250 aa4.28□□□□□ -1.72
CDHR3-213ENST00000488386 GGNBP1Q5YKI7 109 aa4.28□□□□□ -1.72
CDHR3-213ENST00000488386 TMEM182Q6ZP80 229 aaPredicted RBP4.28□□□□□ -1.72
CDHR3-213ENST00000488386 C9orf47Q6ZRZ4 202 aa4.28□□□□□ -1.72
CDHR3-213ENST00000488386 TRPT1Q86TN4 253 aaKnown RBP4.28□□□□□ -1.72
CDHR3-213ENST00000488386 KIR2DL5AQ8N109 375 aa4.28□□□□□ -1.72
CDHR3-213ENST00000488386 KIR2DL5BQ8NHK3 375 aa4.28□□□□□ -1.72
CDHR3-213ENST00000488386 RNASEH2CQ8TDP1 164 aaKnown RBP4.28□□□□□ -1.72
CDHR3-213ENST00000488386 PHLDA1Q8WV24 401 aaPredicted RBP4.28□□□□□ -1.72
CDHR3-213ENST00000488386 SCGB3A2Q96PL1 93 aa4.28□□□□□ -1.72
CDHR3-213ENST00000488386 TMEM231Q9H6L2 316 aa4.28□□□□□ -1.72
CDHR3-213ENST00000488386 RABL2AQ9UBK7 228 aaPredicted RBP4.28□□□□□ -1.72
CDHR3-213ENST00000488386 RABL2BQ9UNT1 228 aa4.28□□□□□ -1.72
CDHR3-213ENST00000488386 TP53TG1Q9Y2A0 90 aa4.28□□□□□ -1.72
CDHR3-213ENST00000488386 IGHV4-28A0A0C4DH34 117 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 HELTA6NFD8 242 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 FAM90A26D6RGX4 464 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 F6UB75 175 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 BUB3O43684 328 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 SCGB2A1O75556 95 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 RBMY1A1P0DJD3 496 aaKnown RBP4.27□□□□□ -1.73
CDHR3-213ENST00000488386 RBMY1CP0DJD4 496 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 BTCP35070 178 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 POLR2GP62487 172 aaKnown RBP eCLIP4.27□□□□□ -1.73
CDHR3-213ENST00000488386 RBMY1FQ15415 496 aaKnown RBP4.27□□□□□ -1.73
CDHR3-213ENST00000488386 SPANXN5Q5MJ07 72 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 TRIQKQ629K1 86 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 ETFRF1Q6IPR1 90 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 CEMP1Q6PRD7 247 aaPredicted RBP4.27□□□□□ -1.73
CDHR3-213ENST00000488386 SIGLEC15Q6ZMC9 328 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 CENPSQ8N2Z9 138 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 RPP25LQ8N5L8 163 aaKnown RBP4.27□□□□□ -1.73
CDHR3-213ENST00000488386 C11orf45Q8TAV5 145 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 RNF125Q96EQ8 232 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 GRAMD2BQ96HH9 432 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 NARS2Q96I59 477 aaKnown RBP4.27□□□□□ -1.73
CDHR3-213ENST00000488386 SLC35E1Q96K37 410 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 LINC00052Q96N35 136 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 RAB40CQ96S21 281 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 SCRT1Q9BWW7 348 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 DOK5Q9P104 306 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 XCL2Q9UBD3 114 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 CELA1Q9UNI1 258 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 U3KQ87 197 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 KMT2AQ03164 3969 aa4.27□□□□□ -1.73
CDHR3-213ENST00000488386 VPS13DQ5THJ4 4388 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 TRAV2A0A0B4J234 112 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 C9orf170A2RU37 121 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 SMCO3A2RU48 225 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 GAGE12JA6NER3 117 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 NUPR2A6NF83 97 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 PRSS46E5RG02 174 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 CCSO14618 274 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 SYNGR2O43760 224 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 NDUFB6O95139 128 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 INPP1P49441 399 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 EIF2B2P49770 351 aaKnown RBP4.26□□□□□ -1.73
CDHR3-213ENST00000488386 CMC4P56277 68 aaPredicted RBP4.26□□□□□ -1.73
CDHR3-213ENST00000488386 AP3S2P59780 193 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 RRAS2P62070 204 aaPredicted RBP4.26□□□□□ -1.73
CDHR3-213ENST00000488386 SRPXP78539 464 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 SPANXN2Q5MJ10 180 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 LINC00299Q6ZSB3 139 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 ACOT7LQ6ZUV0 252 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 LRTM2Q8N967 370 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 Q8NAQ8 132 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 GATAD1Q8WUU5 269 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 PPP1R14BQ96C90 147 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 SLC25A22Q9H936 323 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 NRN1Q9NPD7 142 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 NDUFA13Q9P0J0 144 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 DNAH10Q8IVF4 4471 aa4.26□□□□□ -1.73
CDHR3-213ENST00000488386 TRAV6A0A075B6T7 132 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 IGHV3OR16-12A0A075B7B8 117 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 DUXBA0A1W2PPF3 345 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 SSSCA1O60232 199 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 PRM2P04554 102 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 CD5P06127 495 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 SNRPCP09234 159 aaKnown RBP4.25□□□□□ -1.73
CDHR3-213ENST00000488386 OR4E1P0C645 316 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 ZNF705DP0CH99 300 aaPredicted RBP4.25□□□□□ -1.73
CDHR3-213ENST00000488386 ZNF705BP0CI00 300 aaPredicted RBP4.25□□□□□ -1.73
CDHR3-213ENST00000488386 IL7P13232 177 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 ORM2P19652 201 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 GPX4P36969 197 aaPredicted RBP4.25□□□□□ -1.73
CDHR3-213ENST00000488386 EMP1P54849 157 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 RAB11AP62491 216 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 AKR1C1Q04828 323 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 OR8G2PQ6IF36 304 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 Q6ZTC4 211 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 NOXA1Q86UR1 476 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 CSNK1G2-AS1Q8NCQ2 148 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 OR4B1Q8NGF8 309 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 OR1B1Q8NGR6 318 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 DEDD2Q8WXF8 326 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 C17orf77Q96MU5 243 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 SLC25A21Q9BQT8 299 aaPredicted RBP4.25□□□□□ -1.73
CDHR3-213ENST00000488386 SLC35B3Q9H1N7 401 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 PSENENQ9NZ42 101 aa4.25□□□□□ -1.73
CDHR3-213ENST00000488386 TMED3Q9Y3Q3 217 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms