RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 CDK6Q00534 326 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 SPA17Q15506 151 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 TAF1AQ15573 450 aaPredicted RBP0.24□□□□□ -2.37
CCDC66-221ENST00000487739 LINC00575Q6W349 94 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 GOLT1AQ6ZVE7 132 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 S100A7AQ86SG5 101 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 TEN1Q86WV5 123 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 OR10X1Q8NGY0 326 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 PSMF1Q92530 271 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 POP5Q969H6 163 aaKnown RBP0.24□□□□□ -2.37
CCDC66-221ENST00000487739 RAB37Q96AX2 223 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 DGCR14Q96DF8 476 aaKnown RBP0.24□□□□□ -2.37
CCDC66-221ENST00000487739 ZC2HC1AQ96GY0 325 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 SMR3AQ99954 134 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 NPCDR1Q9BY65 106 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 WFDC10AQ9H1F0 79 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 NMNAT1Q9HAN9 279 aaPredicted RBP0.24□□□□□ -2.37
CCDC66-221ENST00000487739 TMEM138Q9NPI0 162 aa0.24□□□□□ -2.37
CCDC66-221ENST00000487739 ZGRF1Q86YA3 2104 aa0.23□□□□□ -2.37
CCDC66-221ENST00000487739 ZNF462Q96JM2 2506 aa0.23□□□□□ -2.37
CCDC66-221ENST00000487739 A0A0D9SG42 100 aa0.23□□□□□ -2.37
CCDC66-221ENST00000487739 M0R233 179 aa0.23□□□□□ -2.37
CCDC66-221ENST00000487739 IFNA7P01567 189 aa0.23□□□□□ -2.37
CCDC66-221ENST00000487739 CXCL8P10145 99 aa0.23□□□□□ -2.37
CCDC66-221ENST00000487739 CANT1Q8WVQ1 401 aa0.23□□□□□ -2.37
CCDC66-221ENST00000487739 MUCL1Q96DR8 90 aa0.23□□□□□ -2.37
CCDC66-221ENST00000487739 C9orf16Q9BUW7 83 aa0.23□□□□□ -2.37
CCDC66-221ENST00000487739 IMUPQ9GZP8 106 aa0.23□□□□□ -2.37
CCDC66-221ENST00000487739 OPTCQ9UBM4 332 aa0.23□□□□□ -2.37
CCDC66-221ENST00000487739 CEP164Q9UPV0 1460 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 MIA2Q96PC5 1412 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 IGLV3-32A0A0A0MS00 114 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 BANF1O75531 89 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 SERPINA1P01009 418 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 PPYP01298 95 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 CST2P09228 141 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 CTXN2P0C2S0 81 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 COX7CP15954 63 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 DYNLT3P51808 116 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 MYL5Q02045 173 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 EIF5AL1Q6IS14 154 aaKnown RBP0.22□□□□□ -2.37
CCDC66-221ENST00000487739 PATE2Q6UY27 113 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 PRRT1Q99946 306 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 PBOV1Q9GZY1 135 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 NIT2Q9NQR4 276 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 CAMSAP1Q5T5Y3 1602 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 MYH2Q9UKX2 1941 aa0.22□□□□□ -2.37
CCDC66-221ENST00000487739 NUPR2A6NF83 97 aa0.21□□□□□ -2.38
CCDC66-221ENST00000487739 C17orf112F2Z3M2 114 aa0.21□□□□□ -2.38
CCDC66-221ENST00000487739 HLA-EP13747 358 aa0.21□□□□□ -2.38
CCDC66-221ENST00000487739 NFYBP25208 207 aa0.21□□□□□ -2.38
CCDC66-221ENST00000487739 SPINK9Q5DT21 86 aa0.21□□□□□ -2.38
CCDC66-221ENST00000487739 GLIPR1L1Q6UWM5 242 aa0.21□□□□□ -2.38
CCDC66-221ENST00000487739 TMEM14EPQ6UXP3 125 aa0.21□□□□□ -2.38
CCDC66-221ENST00000487739 EXOC3-AS1Q8N2X6 119 aa0.21□□□□□ -2.38
CCDC66-221ENST00000487739 OR5D16Q8NGK9 328 aa0.21□□□□□ -2.38
CCDC66-221ENST00000487739 CCDC94Q9BW85 323 aaPredicted RBP0.21□□□□□ -2.38
CCDC66-221ENST00000487739 MED29Q9NX70 200 aa0.21□□□□□ -2.38
CCDC66-221ENST00000487739 ARL2BPQ9Y2Y0 163 aa0.21□□□□□ -2.38
CCDC66-221ENST00000487739 TRAV23DV6A0A075B6W5 121 aa0.2□□□□□ -2.38
CCDC66-221ENST00000487739 A0A087WSZ3 146 aa0.2□□□□□ -2.38
CCDC66-221ENST00000487739 JMJD7-PLA2G4BH0Y9G9 81 aa0.2□□□□□ -2.38
CCDC66-221ENST00000487739 K7EIL1 84 aa0.2□□□□□ -2.38
CCDC66-221ENST00000487739 GGCTO75223 188 aaKnown RBP0.2□□□□□ -2.38
CCDC66-221ENST00000487739 CRHP06850 196 aa0.2□□□□□ -2.38
CCDC66-221ENST00000487739 KRTAP2-3P0C7H8 128 aa0.2□□□□□ -2.38
CCDC66-221ENST00000487739 NCALDP61601 193 aa0.2□□□□□ -2.38
CCDC66-221ENST00000487739 CIRBPQ14011 172 aaKnown RBP0.2□□□□□ -2.38
CCDC66-221ENST00000487739 OR5AS1Q8N127 324 aa0.2□□□□□ -2.38
CCDC66-221ENST00000487739 OR4K15Q8NH41 348 aa0.2□□□□□ -2.38
CCDC66-221ENST00000487739 ZNF431Q8TF32 576 aaPredicted RBP0.2□□□□□ -2.38
CCDC66-221ENST00000487739 CHCHD1Q96BP2 118 aaKnown RBP0.2□□□□□ -2.38
CCDC66-221ENST00000487739 LYSMD1Q96S90 227 aa0.2□□□□□ -2.38
CCDC66-221ENST00000487739 KRTAP2-4Q9BYR9 128 aa0.2□□□□□ -2.38
CCDC66-221ENST00000487739 KRTAP2-1Q9BYU5 128 aa0.2□□□□□ -2.38
CCDC66-221ENST00000487739 RFX7Q2KHR2 1363 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 MUC4Q99102 2169 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 KCPQ6ZWJ8 1503 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 K7ERJ3 54 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 C1QBP02746 253 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 IFNA6P05013 189 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 CD14P08571 375 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 CXCL1P09341 107 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 OR10J4P0C629 311 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 RAB5CP51148 216 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 ARPP19P56211 112 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 HSPE1P61604 102 aaKnown RBP0.19□□□□□ -2.38
CCDC66-221ENST00000487739 ZHX1-C8orf76Q96EF9 292 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 ARMC1Q9NVT9 282 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 OR52A1Q9UKL2 312 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 ARL5AQ9Y689 179 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 LOC285556D6RIA3 1793 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 FREM3P0C091 2139 aa0.19□□□□□ -2.38
CCDC66-221ENST00000487739 C9orf170A2RU37 121 aa0.18□□□□□ -2.38
CCDC66-221ENST00000487739 C5orf67F2Z3F1 127 aa0.18□□□□□ -2.38
CCDC66-221ENST00000487739 SPTBP11277 2137 aa0.18□□□□□ -2.38
CCDC66-221ENST00000487739 SPINT3P49223 89 aa0.18□□□□□ -2.38
CCDC66-221ENST00000487739 INSL3P51460 131 aa0.18□□□□□ -2.38
CCDC66-221ENST00000487739 TMBIM6P55061 237 aa0.18□□□□□ -2.38
CCDC66-221ENST00000487739 REEP5Q00765 189 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms