RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ARL3P36405 182 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 C10orf99Q6UWK7 81 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.28□□□□□ -1.24
SF3B1-211ENST00000487698 MYOZ3Q8TDC0 251 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 BLNKQ8WV28 456 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 DUX5Q96PT3 197 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 GNB4Q9HAV0 340 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 SMCO4Q9NRQ5 59 aa7.28□□□□□ -1.24
SF3B1-211ENST00000487698 TRBV19A0A075B6N1 114 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 IGHV3OR16-8A0A075B7F1 116 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 C9JCJ5 164 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 RPL35P42766 123 aaKnown RBP7.27□□□□□ -1.25
SF3B1-211ENST00000487698 RANP62826 216 aaKnown RBP7.27□□□□□ -1.25
SF3B1-211ENST00000487698 ADIRFQ15847 76 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 LINC01551Q86U37 167 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 TUBA4BQ9H853 241 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 SERTAD4Q9NUC0 356 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 RNF24Q9Y225 148 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 HIVEP2P31629 2446 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 H3BTX0 84 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 TSPAN4O14817 238 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 IGHV3-11P01762 117 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 FOXE3Q13461 319 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 RNF152Q8N8N0 203 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 OR4F17Q8NGA8 305 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 OR4X2Q8NGF9 303 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 TMEM190Q8WZ59 177 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 Q9H3A6 140 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 ESM1Q9NQ30 184 aa7.27□□□□□ -1.25
SF3B1-211ENST00000487698 PGPEP1LA6NFU8 196 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 CLDN34H7C241 214 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 NDUFA4O00483 81 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 BUB3O43684 328 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 RPL7P18124 248 aaKnown RBP7.26□□□□□ -1.25
SF3B1-211ENST00000487698 S100A7P31151 101 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 SLC35B1P78383 322 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 PDE6HQ13956 83 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 FAM209BQ5JX69 171 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 TEX38Q6PEX7 206 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 C5orf17Q8NAS9 161 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 HIST1H2BAQ96A08 127 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 YPEL4Q96NS1 127 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 SMR3AQ99954 134 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 OTORQ9NRC9 128 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 LY96Q9Y6Y9 160 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 U3KQE9 123 aa7.26□□□□□ -1.25
SF3B1-211ENST00000487698 PGPA6NDG6 321 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 SLC17A3O00476 420 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 PEX7O00628 323 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 ELANEP08246 267 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 RPL15P61313 204 aaKnown RBP7.25□□□□□ -1.25
SF3B1-211ENST00000487698 RNF212Q495C1 297 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 SIGLEC15Q6ZMC9 328 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 IGF2BP2-AS1Q96M15 143 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 C17orf77Q96MU5 243 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 TMEM242Q9NWH2 141 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 EPDR1Q9UM22 224 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 NSD1Q96L73 2696 aaPredicted RBP7.25□□□□□ -1.25
SF3B1-211ENST00000487698 NF1P21359 2839 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 HELTA6NFD8 242 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 SLC25A5P05141 298 aaKnown RBP7.25□□□□□ -1.25
SF3B1-211ENST00000487698 RPLP1P05386 114 aaKnown RBP7.25□□□□□ -1.25
SF3B1-211ENST00000487698 GNG5P63218 68 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 SCGB2A2Q13296 93 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 CENPWQ5EE01 88 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 C1orf194Q5T5A4 169 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 UNQ9165/PRO28630Q6UXU0 137 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 LYPD1Q8N2G4 141 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 OCC1Q8TAD7 63 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 ISOC2Q96AB3 205 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 METTL26Q96S19 204 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 CDC42EP3Q9UKI2 254 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 PRELID1Q9Y255 219 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 KLF12Q9Y4X4 402 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 SMAD5-AS1Q9Y6J3 95 aa7.25□□□□□ -1.25
SF3B1-211ENST00000487698 CXorf65A6NEN9 183 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 FAM181BA6NEQ2 426 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 COLCA2A8K830 154 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 K7EN84 100 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 LY6G6DO95868 133 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 Q6ZSV7 163 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 OR8I2Q8N0Y5 310 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 C15orf54Q8N8G6 183 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 GPR82Q96P67 336 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 ATG101Q9BSB4 218 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 CTDSP1Q9GZU7 261 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 PEF1Q9UBV8 284 aaKnown RBP7.24□□□□□ -1.25
SF3B1-211ENST00000487698 CUBNO60494 3623 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 FLNBO75369 2602 aaKnown RBP7.24□□□□□ -1.25
SF3B1-211ENST00000487698 A0A087X0K7 114 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 GGCTO75223 188 aaKnown RBP7.24□□□□□ -1.25
SF3B1-211ENST00000487698 ZNF253O75346 499 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 IGLV2-8P01709 118 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 APOHP02749 345 aaPredicted RBP7.24□□□□□ -1.25
SF3B1-211ENST00000487698 MT-ND4LP03901 98 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 TCRAP04437 139 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 CD99P14209 185 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 GNG4P50150 75 aa7.24□□□□□ -1.25
SF3B1-211ENST00000487698 CNN1P51911 297 aaKnown RBP7.24□□□□□ -1.25
SF3B1-211ENST00000487698 TAS2R60P59551 318 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms