RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SAP30O75446 220 aa9.64□□□□□ -0.87
HDAC6-229ENST00000486665 MBP02144 154 aa9.64□□□□□ -0.87
HDAC6-229ENST00000486665 DEFB114Q30KQ6 69 aa9.64□□□□□ -0.87
HDAC6-229ENST00000486665 AKR1C8PQ5T2L2 129 aa9.64□□□□□ -0.87
HDAC6-229ENST00000486665 GLMPQ8WWB7 406 aa9.64□□□□□ -0.87
HDAC6-229ENST00000486665 SLC25A22Q9H936 323 aa9.64□□□□□ -0.87
HDAC6-229ENST00000486665 FUT9Q9Y231 359 aa9.64□□□□□ -0.87
HDAC6-229ENST00000486665 A0A1W2PS18 150 aa9.63□□□□□ -0.87
HDAC6-229ENST00000486665 FHITP49789 147 aa9.63□□□□□ -0.87
HDAC6-229ENST00000486665 RHOBP62745 196 aa9.63□□□□□ -0.87
HDAC6-229ENST00000486665 ZNF726P1Q15940 193 aa9.63□□□□□ -0.87
HDAC6-229ENST00000486665 FAM74A1Q5RGS3 127 aa9.63□□□□□ -0.87
HDAC6-229ENST00000486665 FAM90A2PQ658T7 463 aa9.63□□□□□ -0.87
HDAC6-229ENST00000486665 ALKAL2Q6UX46 152 aa9.63□□□□□ -0.87
HDAC6-229ENST00000486665 SSX7Q7RTT5 188 aa9.63□□□□□ -0.87
HDAC6-229ENST00000486665 NARS2Q96I59 477 aaKnown RBP9.63□□□□□ -0.87
HDAC6-229ENST00000486665 FAM167A-AS1Q96KT0 104 aa9.63□□□□□ -0.87
HDAC6-229ENST00000486665 TECRQ9NZ01 308 aaKnown RBP9.63□□□□□ -0.87
HDAC6-229ENST00000486665 PFDN2Q9UHV9 154 aa9.63□□□□□ -0.87
HDAC6-229ENST00000486665 SMAD5-AS1Q9Y6J3 95 aa9.63□□□□□ -0.87
HDAC6-229ENST00000486665 IZUMO1RA6ND01 250 aa9.62□□□□□ -0.87
HDAC6-229ENST00000486665 MRPS12O15235 138 aaKnown RBP9.62□□□□□ -0.87
HDAC6-229ENST00000486665 HMGB3O15347 200 aaKnown RBP9.62□□□□□ -0.87
HDAC6-229ENST00000486665 IGLV1-51P01701 117 aa9.62□□□□□ -0.87
HDAC6-229ENST00000486665 CD300EQ496F6 205 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-229ENST00000486665 C1orf194Q5T5A4 169 aa9.62□□□□□ -0.87
HDAC6-229ENST00000486665 C9orf66Q5T8R8 295 aa9.62□□□□□ -0.87
HDAC6-229ENST00000486665 EIF5AL1Q6IS14 154 aaKnown RBP9.62□□□□□ -0.87
HDAC6-229ENST00000486665 TCF24Q7RTU0 167 aa9.62□□□□□ -0.87
HDAC6-229ENST00000486665 OR8I2Q8N0Y5 310 aa9.62□□□□□ -0.87
HDAC6-229ENST00000486665 MRAPQ8TCY5 172 aa9.62□□□□□ -0.87
HDAC6-229ENST00000486665 DYNLRB2Q8TF09 96 aa9.62□□□□□ -0.87
HDAC6-229ENST00000486665 RAB24Q969Q5 203 aa9.62□□□□□ -0.87
HDAC6-229ENST00000486665 GRAMD2BQ96HH9 432 aa9.62□□□□□ -0.87
HDAC6-229ENST00000486665 C17orf77Q96MU5 243 aa9.62□□□□□ -0.87
HDAC6-229ENST00000486665 SLC25A2Q9BXI2 301 aa9.62□□□□□ -0.87
HDAC6-229ENST00000486665 MRPL32Q9BYC8 188 aaKnown RBP9.62□□□□□ -0.87
HDAC6-229ENST00000486665 ACTR3CQ9C0K3 210 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-229ENST00000486665 AURKAIP1Q9NWT8 199 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-229ENST00000486665 A0A1W2PPV4 95 aa9.61□□□□□ -0.87
HDAC6-229ENST00000486665 UMAD1C9J7I0 102 aa9.61□□□□□ -0.87
HDAC6-229ENST00000486665 SNRPCP09234 159 aaKnown RBP9.61□□□□□ -0.87
HDAC6-229ENST00000486665 S100A7P31151 101 aa9.61□□□□□ -0.87
HDAC6-229ENST00000486665 CDC34P49427 236 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-229ENST00000486665 SULT1A2P50226 295 aa9.61□□□□□ -0.87
HDAC6-229ENST00000486665 S100A7AQ86SG5 101 aa9.61□□□□□ -0.87
HDAC6-229ENST00000486665 FAM213BQ8TBF2 198 aa9.61□□□□□ -0.87
HDAC6-229ENST00000486665 ZNF503Q96F45 646 aa9.61□□□□□ -0.87
HDAC6-229ENST00000486665 PHYHIPLQ96FC7 376 aa9.61□□□□□ -0.87
HDAC6-229ENST00000486665 MCRIP2Q9BUT9 160 aaKnown RBP9.61□□□□□ -0.87
HDAC6-229ENST00000486665 TMEM231Q9H6L2 316 aa9.61□□□□□ -0.87
HDAC6-229ENST00000486665 IGKV3-7A0A075B6H7 116 aa9.6□□□□□ -0.87
HDAC6-229ENST00000486665 PYYP10082 97 aa9.6□□□□□ -0.87
HDAC6-229ENST00000486665 BMI1P35226 326 aa9.6□□□□□ -0.87
HDAC6-229ENST00000486665 TEX261Q6UWH6 196 aa9.6□□□□□ -0.87
HDAC6-229ENST00000486665 SIGLEC15Q6ZMC9 328 aa9.6□□□□□ -0.87
HDAC6-229ENST00000486665 TMEM61Q8N0U2 210 aa9.6□□□□□ -0.87
HDAC6-229ENST00000486665 GBGT1Q8N5D6 347 aa9.6□□□□□ -0.87
HDAC6-229ENST00000486665 CTXND1A0A1B0GTU2 59 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 ZNF785A8K8V0 405 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 H3BQ15 152 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 H3BTX0 84 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 STAG3L2P0CL84 134 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 STAG3L3P0CL85 134 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 GP9P14770 177 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 RPL7P18124 248 aaKnown RBP9.59□□□□□ -0.87
HDAC6-229ENST00000486665 RAB5CP51148 216 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 INSL3P51460 131 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 RPL11P62913 178 aaKnown RBP9.59□□□□□ -0.87
HDAC6-229ENST00000486665 IFITM2Q01629 132 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 LCN15Q6UWW0 184 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 BPIFA4PQ86YQ2 179 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 ZNF680Q8NEM1 530 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 OR51M1Q9H341 326 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 TMEM14CQ9P0S9 112 aa9.59□□□□□ -0.87
HDAC6-229ENST00000486665 TENM3Q9P273 2699 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 HELTA6NFD8 242 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 IGLC2P0DOY2 106 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 GALR1P47211 349 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 TFPI2P48307 235 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 FGF8P55075 233 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-229ENST00000486665 TAS2R45P59539 299 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 DPPA3Q6W0C5 159 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 RBPMS2Q6ZRY4 209 aaKnown RBP9.58□□□□□ -0.88
HDAC6-229ENST00000486665 WFDC3Q8IUB2 231 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 RNF141Q8WVD5 230 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 MBD3L1Q8WWY6 194 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 FXYD5Q96DB9 178 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 GPR82Q96P67 336 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 PAXXQ9BUH6 204 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 MS4A6AQ9H2W1 248 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 ZNF586Q9NXT0 402 aa9.58□□□□□ -0.88
HDAC6-229ENST00000486665 TRAV25A0A0B4J276 109 aa9.57□□□□□ -0.88
HDAC6-229ENST00000486665 TSPAN4O14817 238 aa9.57□□□□□ -0.88
HDAC6-229ENST00000486665 OR7C2O60412 319 aa9.57□□□□□ -0.88
HDAC6-229ENST00000486665 OR10J4P0C629 311 aa9.57□□□□□ -0.88
HDAC6-229ENST00000486665 ARL14EPLP0DKL9 152 aa9.57□□□□□ -0.88
HDAC6-229ENST00000486665 HIST1H1EP10412 219 aaKnown RBP9.57□□□□□ -0.88
HDAC6-229ENST00000486665 ATF4P18848 351 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms