RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 I3L2K1 104 aa17.86■□□□□ 0.45
CLN5-202ENST00000485938 PRB3Q04118 309 aaPredicted RBP17.86■□□□□ 0.45
CLN5-202ENST00000485938 RBPJQ06330 500 aa17.86■□□□□ 0.45
CLN5-202ENST00000485938 PET117Q6UWS5 81 aa17.86■□□□□ 0.45
CLN5-202ENST00000485938 RNASE8Q8TDE3 154 aaKnown RBP17.86■□□□□ 0.45
CLN5-202ENST00000485938 MAP1LC3CQ9BXW4 147 aa17.86■□□□□ 0.45
CLN5-202ENST00000485938 MUC6Q6W4X9 2439 aa17.85■□□□□ 0.45
CLN5-202ENST00000485938 IGHV2-70DA0A0C4DH43 119 aa17.85■□□□□ 0.45
CLN5-202ENST00000485938 FBLN7Q53RD9 439 aa17.85■□□□□ 0.45
CLN5-202ENST00000485938 SLC25A34Q6PIV7 304 aa17.85■□□□□ 0.45
CLN5-202ENST00000485938 INSIG2Q9Y5U4 225 aa17.85■□□□□ 0.45
CLN5-202ENST00000485938 MGAQ8IWI9 3026 aa17.85■□□□□ 0.45
CLN5-202ENST00000485938 ZC2HC1AQ96GY0 325 aa17.84■□□□□ 0.45
CLN5-202ENST00000485938 TMUB1Q9BVT8 246 aa17.84■□□□□ 0.45
CLN5-202ENST00000485938 LOC105371242A0A075B767 164 aa17.84■□□□□ 0.45
CLN5-202ENST00000485938 HTR1DP28221 377 aa17.84■□□□□ 0.45
CLN5-202ENST00000485938 RASL11BQ9BPW5 248 aa17.84■□□□□ 0.45
CLN5-202ENST00000485938 DYNLRB1Q9NP97 96 aa17.84■□□□□ 0.45
CLN5-202ENST00000485938 A0A1B0GUT8 65 aa17.83■□□□□ 0.45
CLN5-202ENST00000485938 IGKV1-17P01599 117 aa17.83■□□□□ 0.45
CLN5-202ENST00000485938 NEU4Q8WWR8 484 aaPredicted RBP17.83■□□□□ 0.45
CLN5-202ENST00000485938 SRSF12Q8WXF0 261 aaKnown RBP17.83■□□□□ 0.45
CLN5-202ENST00000485938 FBXL15Q9H469 300 aa17.83■□□□□ 0.45
CLN5-202ENST00000485938 SCRT2Q9NQ03 307 aa17.83■□□□□ 0.45
CLN5-202ENST00000485938 HSBP1L1C9JCN9 74 aa17.83■□□□□ 0.44
CLN5-202ENST00000485938 BUB1B-PAK6H3BSN5 160 aa17.83■□□□□ 0.44
CLN5-202ENST00000485938 K7EP13 123 aa17.83■□□□□ 0.44
CLN5-202ENST00000485938 RBP4P02753 201 aa17.83■□□□□ 0.44
CLN5-202ENST00000485938 MCRIP2Q9BUT9 160 aaKnown RBP17.83■□□□□ 0.44
CLN5-202ENST00000485938 HSPB8Q9UJY1 196 aa17.83■□□□□ 0.44
CLN5-202ENST00000485938 TRBV19A0A075B6N1 114 aa17.82■□□□□ 0.44
CLN5-202ENST00000485938 VSTM5A8MXK1 200 aa17.82■□□□□ 0.44
CLN5-202ENST00000485938 ARMS2P0C7Q2 107 aa17.82■□□□□ 0.44
CLN5-202ENST00000485938 NGBQ9NPG2 151 aa17.82■□□□□ 0.44
CLN5-202ENST00000485938 PRRG2O14669 202 aa17.82■□□□□ 0.44
CLN5-202ENST00000485938 NUDT3O95989 172 aa17.82■□□□□ 0.44
CLN5-202ENST00000485938 BVES-AS1Q5T3Y7 98 aa17.82■□□□□ 0.44
CLN5-202ENST00000485938 TMEM75Q8N9X5 138 aa17.82■□□□□ 0.44
CLN5-202ENST00000485938 JKAMPQ9P055 326 aa17.82■□□□□ 0.44
CLN5-202ENST00000485938 CSN3P07498 182 aa17.81■□□□□ 0.44
CLN5-202ENST00000485938 GATD1Q8NB37 220 aa17.81■□□□□ 0.44
CLN5-202ENST00000485938 C17orf77Q96MU5 243 aa17.81■□□□□ 0.44
CLN5-202ENST00000485938 SHANK2-AS3Q9BTD1 123 aa17.81■□□□□ 0.44
CLN5-202ENST00000485938 RBX1P62877 108 aa17.81■□□□□ 0.44
CLN5-202ENST00000485938 SCNM1Q9BWG6 230 aa17.81■□□□□ 0.44
CLN5-202ENST00000485938 RALYQ9UKM9 306 aaKnown RBP17.81■□□□□ 0.44
CLN5-202ENST00000485938 GVINP1Q7Z2Y8 2422 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 SHISA9B4DS77 424 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 E7EQL1 145 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 PCP4P48539 62 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 RIGQ13278 110 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 LINC01545Q5VT33 79 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 ZGRF1Q86YA3 2104 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 TMEM190Q8WZ59 177 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 PCNX1Q96RV3 2341 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 TAX1BP3O14907 124 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 SIGLEC15Q6ZMC9 328 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 BPIFA4PQ86YQ2 179 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 ASCL2Q99929 193 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 MS4A6AQ9H2W1 248 aa17.8■□□□□ 0.44
CLN5-202ENST00000485938 H0Y8G0 127 aa17.79■□□□□ 0.44
CLN5-202ENST00000485938 HLA-DRB1P01911 266 aa17.79■□□□□ 0.44
CLN5-202ENST00000485938 C21orf62-AS1Q17RA5 79 aa17.79■□□□□ 0.44
CLN5-202ENST00000485938 H3BRN7 92 aa17.78■□□□□ 0.44
CLN5-202ENST00000485938 AP5S1Q9NUS5 200 aa17.78■□□□□ 0.44
CLN5-202ENST00000485938 PSG8Q9UQ74 426 aa17.78■□□□□ 0.44
CLN5-202ENST00000485938 RNF24Q9Y225 148 aa17.78■□□□□ 0.44
CLN5-202ENST00000485938 SPTBN2O15020 2390 aa17.78■□□□□ 0.44
CLN5-202ENST00000485938 K7EIM0 57 aa17.78■□□□□ 0.44
CLN5-202ENST00000485938 VAMP3Q15836 100 aa17.78■□□□□ 0.44
CLN5-202ENST00000485938 OR4C5Q8NGB2 326 aa17.78■□□□□ 0.44
CLN5-202ENST00000485938 SH3BGRL2Q9UJC5 107 aa17.78■□□□□ 0.44
CLN5-202ENST00000485938 TRAV30A0A087WSZ9 112 aa17.77■□□□□ 0.44
CLN5-202ENST00000485938 CRIP1P50238 77 aa17.77■□□□□ 0.44
CLN5-202ENST00000485938 PSG3Q16557 428 aa17.77■□□□□ 0.44
CLN5-202ENST00000485938 C12orf54Q6X4T0 127 aa17.77■□□□□ 0.44
CLN5-202ENST00000485938 DEFB125Q8N687 156 aa17.77■□□□□ 0.44
CLN5-202ENST00000485938 PMCHL2Q9BQD1 86 aa17.77■□□□□ 0.44
CLN5-202ENST00000485938 MUC21A0A0G2JKD1 596 aa17.77■□□□□ 0.43
CLN5-202ENST00000485938 MUC21A0A140T8X8 626 aa17.77■□□□□ 0.43
CLN5-202ENST00000485938 A0A1B0GW15 77 aa17.77■□□□□ 0.43
CLN5-202ENST00000485938 MUC21Q5SSG8 566 aa17.77■□□□□ 0.43
CLN5-202ENST00000485938 LYPD1Q8N2G4 141 aa17.77■□□□□ 0.43
CLN5-202ENST00000485938 RPEQ96AT9 228 aa17.77■□□□□ 0.43
CLN5-202ENST00000485938 COX7A1P24310 79 aa17.76■□□□□ 0.43
CLN5-202ENST00000485938 RHOGP84095 191 aa17.76■□□□□ 0.43
CLN5-202ENST00000485938 ERASQ7Z444 233 aa17.76■□□□□ 0.43
CLN5-202ENST00000485938 SRSF8Q9BRL6 282 aaKnown RBP17.76■□□□□ 0.43
CLN5-202ENST00000485938 ZNF747Q9BV97 191 aa17.76■□□□□ 0.43
CLN5-202ENST00000485938 TIMM8BQ9Y5J9 83 aaPredicted RBP17.76■□□□□ 0.43
CLN5-202ENST00000485938 K7EQM0 130 aa17.76■□□□□ 0.43
CLN5-202ENST00000485938 PRB4P10163 310 aaPredicted RBP17.76■□□□□ 0.43
CLN5-202ENST00000485938 PLGLAQ15195 96 aa17.76■□□□□ 0.43
CLN5-202ENST00000485938 MRPS12O15235 138 aaKnown RBP17.75■□□□□ 0.43
CLN5-202ENST00000485938 RNF5Q99942 180 aa17.75■□□□□ 0.43
CLN5-202ENST00000485938 DCHS1Q96JQ0 3298 aa17.75■□□□□ 0.43
CLN5-202ENST00000485938 ZNF491Q8N8L2 437 aa17.75■□□□□ 0.43
CLN5-202ENST00000485938 KALRNO60229 2985 aa17.74■□□□□ 0.43
CLN5-202ENST00000485938 PTPRZ1P23471 2315 aaPredicted RBP17.74■□□□□ 0.43
CLN5-202ENST00000485938 LY6LH3BQJ8 138 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms