RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 DEFA4P12838 97 aa2.58□□□□□ -2
PTCD3-214ENST00000483925 MRPS36P82909 103 aaKnown RBP2.58□□□□□ -2
PTCD3-214ENST00000483925 HES1Q14469 280 aa2.58□□□□□ -2
PTCD3-214ENST00000483925 FAM216BQ8N7L0 139 aa2.58□□□□□ -2
PTCD3-214ENST00000483925 PSORS1C2Q9UIG4 136 aa2.58□□□□□ -2
PTCD3-214ENST00000483925 TNFSF18Q9UNG2 199 aa2.58□□□□□ -2
PTCD3-214ENST00000483925 SCN4AP35499 1836 aa2.58□□□□□ -2
PTCD3-214ENST00000483925 XIRP1Q702N8 1843 aaKnown RBP2.58□□□□□ -2
PTCD3-214ENST00000483925 KDM6AO15550 1401 aaPredicted RBP2.58□□□□□ -2
PTCD3-214ENST00000483925 NISCHQ9Y2I1 1504 aa2.58□□□□□ -2
PTCD3-214ENST00000483925 EIF4G3O43432 1585 aaKnown RBP2.57□□□□□ -2
PTCD3-214ENST00000483925 TRPM1Q7Z4N2 1603 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 IGLV3-9A0A075B6K5 115 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 UQCRQO14949 82 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 NPFFO15130 113 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 TRGC1P0CF51 173 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 LINC00694P0DN24 101 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 MAXP61244 160 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 RELAQ04206 551 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 PYDC2Q56P42 97 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 SPANXN5Q5MJ07 72 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 KRTAP11-1Q8IUC1 163 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 OR10AC1Q8NH08 325 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 DIRC1Q969H9 104 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 C12orf57Q99622 126 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 NDUFB11Q9NX14 153 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 TAS2R4Q9NYW5 299 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 IBTKQ9P2D0 1353 aaPredicted RBP2.57□□□□□ -2
PTCD3-214ENST00000483925 KIAA1107Q9UPP5 1409 aa2.57□□□□□ -2
PTCD3-214ENST00000483925 CACNA1SQ13698 1873 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 PLXND1Q9Y4D7 1925 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 CROCCQ5TZA2 2017 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 PRRC2AP48634 2157 aaKnown RBP2.56□□□□□ -2
PTCD3-214ENST00000483925 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.56□□□□□ -2
PTCD3-214ENST00000483925 HMSDA8MTL9 139 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 ATP6V1G2-DDX39BF2Z307 99 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 LYRM1O43325 122 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 IGF2P01344 180 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 TPT1P13693 172 aaKnown RBP2.56□□□□□ -2
PTCD3-214ENST00000483925 HRES1P13985 223 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 HINT1P49773 126 aaPredicted RBP2.56□□□□□ -2
PTCD3-214ENST00000483925 FOXA3P55318 350 aaPredicted RBP2.56□□□□□ -2
PTCD3-214ENST00000483925 TMEM258P61165 79 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 MRPS10P82664 201 aaKnown RBP2.56□□□□□ -2
PTCD3-214ENST00000483925 TAF9Q16594 264 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 ESRGQ1W209 222 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 DEFB134Q4QY38 66 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 HAGHLQ6PII5 290 aaPredicted RBP2.56□□□□□ -2
PTCD3-214ENST00000483925 IDO2Q6ZQW0 420 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 LINC00471Q8N535 108 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 CHCHD1Q96BP2 118 aaKnown RBP2.56□□□□□ -2
PTCD3-214ENST00000483925 GNG8Q9UK08 70 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 LY96Q9Y6Y9 160 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 SCAF11Q99590 1463 aaKnown RBP2.56□□□□□ -2
PTCD3-214ENST00000483925 MYO10Q9HD67 2058 aa2.56□□□□□ -2
PTCD3-214ENST00000483925 A0A1B0GVG6 124 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 UHRF1BP1LA0JNW5 1464 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 ZNF727A8MUV8 499 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 ODF3BA8MYP8 253 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 C17orf112F2Z3M2 114 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 HBDP02042 147 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 SHBGP04278 402 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 TCRAP04437 139 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 HIST1H1BP16401 226 aaKnown RBP2.55□□□□□ -2
PTCD3-214ENST00000483925 ZNF25P17030 456 aaPredicted RBP2.55□□□□□ -2
PTCD3-214ENST00000483925 GUCA1AP43080 201 aaPredicted RBP2.55□□□□□ -2
PTCD3-214ENST00000483925 AKR1D1P51857 326 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 ERHP84090 104 aaKnown RBP2.55□□□□□ -2
PTCD3-214ENST00000483925 NNATQ16517 81 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 Q6ZQT0 140 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 ARHGEF28Q8N1W1 1705 aaKnown RBP2.55□□□□□ -2
PTCD3-214ENST00000483925 ZNF418Q8TF45 676 aaPredicted RBP2.55□□□□□ -2
PTCD3-214ENST00000483925 DLC1Q96QB1 1528 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 RETNLBQ9BQ08 111 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 TMEM191AQ9H0A3 160 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 TAF9BQ9HBM6 251 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 C14orf132Q9NPU4 83 aa2.55□□□□□ -2
PTCD3-214ENST00000483925 ZNF638Q14966 1978 aaKnown RBP2.54□□□□□ -2
PTCD3-214ENST00000483925 NUP210Q8TEM1 1887 aaPredicted RBP2.54□□□□□ -2
PTCD3-214ENST00000483925 NAIPQ13075 1403 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 FAM135BQ49AJ0 1406 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 TMEM2Q9UHN6 1383 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 TRAV27A0A087WT01 109 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 A0A1W2PNM2 257 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 ZNF670-ZNF695F2Z2N8 137 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 PROSCO94903 275 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 PMP2P02689 132 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 SLC25A5P05141 298 aaKnown RBP2.54□□□□□ -2
PTCD3-214ENST00000483925 CTSDP07339 412 aaPredicted RBP2.54□□□□□ -2
PTCD3-214ENST00000483925 BAALC-AS2P0C853 105 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 HLA-DRB4P13762 266 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 FABP4P15090 132 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 MOBPQ13875 183 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 ZNF826PQ6ZT77 177 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 OR8B3Q8NGG8 313 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 Q9BRP9 147 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 PDCD10Q9BUL8 212 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 HLA-DRB4X5D2U9 266 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 THADAQ6YHU6 1953 aa2.54□□□□□ -2
PTCD3-214ENST00000483925 ATRXP46100 2492 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms