RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 LGALS9CQ6DKI2 356 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 DUX3Q96PT4 197 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 NOTCH3Q9UM47 2321 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 OSR1Q8TAX0 266 aaPredicted RBP8.48□□□□□ -1.05
COL12A1-207ENST00000483888 PILRAQ9UKJ1 303 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 CTSBP07858 339 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 CCL8P80075 99 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 DENND4CQ5VZ89 1909 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 TRGV8A0A0C4DH27 118 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 IQCF6A8MYZ5 107 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 TMEM30BQ3MIR4 351 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 CT55Q8WUE5 264 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 TAL2Q16559 108 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 NEGR1Q7Z3B1 354 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 GFRA4Q9GZZ7 299 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 FAM214BQ7L5A3 538 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 SLC25A16P16260 332 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 C8orf46Q8TAG6 207 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 ITLN1Q8WWA0 313 aa8.48□□□□□ -1.05
COL12A1-207ENST00000483888 HAMPP81172 84 aa8.47□□□□□ -1.05
COL12A1-207ENST00000483888 C3orf36Q3SXR2 165 aa8.47□□□□□ -1.05
COL12A1-207ENST00000483888 ANAPC1Q9H1A4 1944 aa8.47□□□□□ -1.05
COL12A1-207ENST00000483888 IGKV2-40A0A087WW87 121 aaPredicted RBP8.47□□□□□ -1.05
COL12A1-207ENST00000483888 IGKV2D-40P01614 121 aaPredicted RBP8.47□□□□□ -1.05
COL12A1-207ENST00000483888 SRD5A1P18405 259 aa8.47□□□□□ -1.05
COL12A1-207ENST00000483888 GLMPQ8WWB7 406 aa8.47□□□□□ -1.05
COL12A1-207ENST00000483888 SIGLEC8Q9NYZ4 499 aa8.47□□□□□ -1.05
COL12A1-207ENST00000483888 NCOA6Q14686 2063 aaPredicted RBP8.47□□□□□ -1.05
COL12A1-207ENST00000483888 FHL5Q5TD97 284 aa8.47□□□□□ -1.05
COL12A1-207ENST00000483888 FBLN5Q9UBX5 448 aa8.47□□□□□ -1.05
COL12A1-207ENST00000483888 TNRC6BQ9UPQ9 1833 aaKnown RBP8.47□□□□□ -1.05
COL12A1-207ENST00000483888 CFHR2P36980 270 aa8.47□□□□□ -1.05
COL12A1-207ENST00000483888 TMEM196Q5HYL7 178 aa8.47□□□□□ -1.05
COL12A1-207ENST00000483888 NPYP01303 97 aa8.46□□□□□ -1.05
COL12A1-207ENST00000483888 YPEL3P61236 119 aaPredicted RBP8.46□□□□□ -1.05
COL12A1-207ENST00000483888 LYPD6BQ8NI32 183 aa8.46□□□□□ -1.05
COL12A1-207ENST00000483888 UPK2O00526 184 aa8.46□□□□□ -1.05
COL12A1-207ENST00000483888 ZNF474Q6S9Z5 364 aaPredicted RBP8.46□□□□□ -1.05
COL12A1-207ENST00000483888 ZNRF1Q8ND25 227 aa8.46□□□□□ -1.05
COL12A1-207ENST00000483888 IGHV3OR16-8A0A075B7F1 116 aa8.46□□□□□ -1.05
COL12A1-207ENST00000483888 ACYP1P07311 99 aa8.46□□□□□ -1.05
COL12A1-207ENST00000483888 ACP7Q6ZNF0 438 aa8.46□□□□□ -1.05
COL12A1-207ENST00000483888 ZC2HC1AQ96GY0 325 aa8.46□□□□□ -1.05
COL12A1-207ENST00000483888 U3KQE9 123 aa8.46□□□□□ -1.05
COL12A1-207ENST00000483888 SH2D1AO60880 128 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 ABCA4P78363 2273 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 IGHV1OR21-1A0A087WYE8 117 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 TMEM54Q969K7 222 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 SMIM27A0A1W2PRY6 76 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 FAM90A9PA6NNJ1 464 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 VWC2Q2TAL6 325 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 TAX1BP3O14907 124 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 CD3EP07766 207 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 FOXI1Q12951 378 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 TMEM131Q92545 1883 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 YPEL1O60688 119 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 YPEL2Q96QA6 119 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 CHCHD5Q9BSY4 110 aa8.46□□□□□ -1.06
COL12A1-207ENST00000483888 RPUSD1Q9UJJ7 312 aaKnown RBP8.46□□□□□ -1.06
COL12A1-207ENST00000483888 KLF14Q8TD94 323 aaPredicted RBP8.45□□□□□ -1.06
COL12A1-207ENST00000483888 LIME1Q9H400 295 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 TRAV17A0A0B4J275 112 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 PDLIM4P50479 330 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 ZNF497Q6ZNH5 498 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 CYYR1Q96J86 154 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 PRB1P04280 392 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 NDUFV3P56181 108 aaKnown RBP8.45□□□□□ -1.06
COL12A1-207ENST00000483888 PEMTQ9UBM1 199 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 ADARB2-AS1A8MUL3 147 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 C2CD4DB7Z1M9 353 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 RNF125Q96EQ8 232 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 PAPPAQ13219 1627 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 ZNF831Q5JPB2 1677 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 LINC00527Q9UJ94 153 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 LTBP3Q9NS15 1303 aa8.45□□□□□ -1.06
COL12A1-207ENST00000483888 FOXS1O43638 330 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 TEN1Q86WV5 123 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 DPH3Q96FX2 82 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 C21orf62Q9NYP8 219 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 A0A1W2PPI3 338 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 TMEM14EPQ6UXP3 125 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 PLXNB3Q9ULL4 1909 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 ZNF329Q86UD4 541 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 IGKV1D-43A0A0B4J1Z2 117 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 HLA-DRB4P13762 266 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 SCRT2Q9NQ03 307 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 HLA-DRB4X5D2U9 266 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 PMS2P5A8MQ11 134 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 C4orf51C9J302 202 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 VCYO14598 125 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 ARMS2P0C7Q2 107 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 COL16A1Q07092 1604 aaPredicted RBP8.44□□□□□ -1.06
COL12A1-207ENST00000483888 SHISA9B4DS77 424 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 IGHG2P01859 326 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 LDLRAD1Q5T700 205 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 RASL10AQ92737 203 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 LINC00479Q96M42 142 aa8.44□□□□□ -1.06
COL12A1-207ENST00000483888 SAA2-SAA4A0A096LPE2 208 aa8.43□□□□□ -1.06
COL12A1-207ENST00000483888 SAA2P0DJI9 122 aaPredicted RBP8.43□□□□□ -1.06
COL12A1-207ENST00000483888 V9GYV3 84 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms