RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CXorf66Q5JRM2 361 aaPredicted RBP9.09□□□□□ -0.95
HPS4-212ENST00000481910 TMEM182Q6ZP80 229 aaPredicted RBP9.09□□□□□ -0.95
HPS4-212ENST00000481910 C2orf50Q96LR7 162 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 CCDC140Q96MF4 163 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 SS18L2Q9UHA2 77 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 LAMTOR2Q9Y2Q5 125 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 NF1P21359 2839 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 TEX22C9J3V5 150 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 MDKP21741 143 aaPredicted RBP9.09□□□□□ -0.95
HPS4-212ENST00000481910 BATFQ16520 125 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 KRTAP24-1Q3LI83 254 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 CENPVQ7Z7K6 275 aaPredicted RBP9.09□□□□□ -0.95
HPS4-212ENST00000481910 SMIM20Q8N5G0 67 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 STPG4Q8N801 248 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 FER1L6-AS1Q8NA97 138 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 OR1N2Q8NGR9 330 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 TNFSF18Q9UNG2 199 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 RNF114Q9Y508 228 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 CLPSL1A2RUU4 121 aa9.08□□□□□ -0.96
HPS4-212ENST00000481910 CEBPZOSA8MTT3 80 aa9.08□□□□□ -0.96
HPS4-212ENST00000481910 NKX2-1P43699 371 aaPredicted RBP9.08□□□□□ -0.96
HPS4-212ENST00000481910 CRIP2P52943 208 aaPredicted RBP9.08□□□□□ -0.96
HPS4-212ENST00000481910 H2BFSP57053 126 aa9.08□□□□□ -0.96
HPS4-212ENST00000481910 FOXL1Q12952 345 aa9.08□□□□□ -0.96
HPS4-212ENST00000481910 ASPHD1Q5U4P2 390 aa9.08□□□□□ -0.96
HPS4-212ENST00000481910 OR8I2Q8N0Y5 310 aa9.08□□□□□ -0.96
HPS4-212ENST00000481910 PLEKHA3Q9HB20 300 aa9.08□□□□□ -0.96
HPS4-212ENST00000481910 ENY2Q9NPA8 101 aa9.08□□□□□ -0.96
HPS4-212ENST00000481910 MRPL16Q9NX20 251 aaKnown RBP9.08□□□□□ -0.96
HPS4-212ENST00000481910 IGLC7A0M8Q6 106 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 FAM90A26D6RGX4 464 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 TPT1P13693 172 aaKnown RBP9.07□□□□□ -0.96
HPS4-212ENST00000481910 SRSF3P84103 164 aaKnown RBP9.07□□□□□ -0.96
HPS4-212ENST00000481910 ID3Q02535 119 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 TEX43Q6ZNM6 134 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 ZNF329Q86UD4 541 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 GPR82Q96P67 336 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 IMMP2LQ96T52 175 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 SRSF8Q9BRL6 282 aaKnown RBP9.07□□□□□ -0.96
HPS4-212ENST00000481910 UQCR10Q9UDW1 63 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 ZNF580Q9UK33 172 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 A0A1B0GUS0 222 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 PSMB11A5LHX3 300 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 REG1AP05451 166 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 SLC35B1P78383 322 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 ERHP84090 104 aaKnown RBP9.07□□□□□ -0.96
HPS4-212ENST00000481910 CYCSP99999 105 aaKnown RBP9.07□□□□□ -0.96
HPS4-212ENST00000481910 WT1-ASQ06250 92 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 CD300EQ496F6 205 aaPredicted RBP9.07□□□□□ -0.96
HPS4-212ENST00000481910 TTC9CQ8N5M4 171 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 WNT10AQ9GZT5 417 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 ZNF355PQ9NSJ1 428 aa9.07□□□□□ -0.96
HPS4-212ENST00000481910 TMEM89A2RUT3 159 aa9.06□□□□□ -0.96
HPS4-212ENST00000481910 SYNGR2O43760 224 aa9.06□□□□□ -0.96
HPS4-212ENST00000481910 TYMSP04818 313 aa9.06□□□□□ -0.96
HPS4-212ENST00000481910 DEFA4P12838 97 aa9.06□□□□□ -0.96
HPS4-212ENST00000481910 PPIFP30405 207 aaKnown RBP9.06□□□□□ -0.96
HPS4-212ENST00000481910 TAS2R30P59541 319 aa9.06□□□□□ -0.96
HPS4-212ENST00000481910 C19orf54Q5BKX5 351 aa9.06□□□□□ -0.96
HPS4-212ENST00000481910 PDZD11Q5EBL8 140 aa9.06□□□□□ -0.96
HPS4-212ENST00000481910 KLHDC1Q8N7A1 406 aa9.06□□□□□ -0.96
HPS4-212ENST00000481910 TMEM158Q8WZ71 300 aa9.06□□□□□ -0.96
HPS4-212ENST00000481910 C19orf24Q9BVV8 132 aa9.06□□□□□ -0.96
HPS4-212ENST00000481910 NMES1Q9C002 83 aa9.06□□□□□ -0.96
HPS4-212ENST00000481910 HEYLQ9NQ87 328 aaPredicted RBP9.06□□□□□ -0.96
HPS4-212ENST00000481910 ZNF586Q9NXT0 402 aa9.06□□□□□ -0.96
HPS4-212ENST00000481910 PSG1P11464 419 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 PAFAH1B2P68402 229 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 IL15RAQ13261 267 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 C10orf99Q6UWK7 81 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 RBPMS2Q6ZRY4 209 aaKnown RBP9.05□□□□□ -0.96
HPS4-212ENST00000481910 OR5AU1Q8NGC0 362 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 WDR89Q96FK6 387 aaPredicted RBP9.05□□□□□ -0.96
HPS4-212ENST00000481910 LSM5Q9Y4Y9 91 aaKnown RBP9.05□□□□□ -0.96
HPS4-212ENST00000481910 RFNGQ9Y644 331 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 NPIPB5A8MRT5 1133 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 INS-IGF2F8WCM5 200 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 TNFRSF6BO95407 300 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 IAPPP10997 89 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 PROK1P58294 105 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 CFHR3Q02985 330 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 LRRC37A5PQ49AS3 106 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 NEGR1Q7Z3B1 354 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 FAM110DQ8TAY7 271 aaPredicted RBP9.05□□□□□ -0.96
HPS4-212ENST00000481910 ZNF471Q9BX82 626 aaPredicted RBP9.05□□□□□ -0.96
HPS4-212ENST00000481910 HSPB8Q9UJY1 196 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 ERG28Q9UKR5 140 aa9.05□□□□□ -0.96
HPS4-212ENST00000481910 J3QR89 54 aa9.04□□□□□ -0.96
HPS4-212ENST00000481910 SSSCA1O60232 199 aa9.04□□□□□ -0.96
HPS4-212ENST00000481910 IFNA1P01562 189 aa9.04□□□□□ -0.96
HPS4-212ENST00000481910 PRH1P02810 166 aa9.04□□□□□ -0.96
HPS4-212ENST00000481910 TRGC2P03986 189 aa9.04□□□□□ -0.96
HPS4-212ENST00000481910 SMAGPQ0VAQ4 97 aa9.04□□□□□ -0.96
HPS4-212ENST00000481910 ELOBQ15370 118 aa9.04□□□□□ -0.96
HPS4-212ENST00000481910 C11orf87Q6NUJ2 197 aa9.04□□□□□ -0.96
HPS4-212ENST00000481910 C19orf35Q6ZS72 473 aa9.04□□□□□ -0.96
HPS4-212ENST00000481910 OR4B1Q8NGF8 309 aa9.04□□□□□ -0.96
HPS4-212ENST00000481910 MS4A10Q96PG2 267 aa9.04□□□□□ -0.96
HPS4-212ENST00000481910 TMEM242Q9NWH2 141 aa9.04□□□□□ -0.96
HPS4-212ENST00000481910 CSDC2Q9Y534 153 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms