RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 SOX21Q9Y651 276 aaPredicted RBP12.34□□□□□ -0.43
RXRA-202ENST00000481739 AKAP9Q99996 3911 aa12.34□□□□□ -0.43
RXRA-202ENST00000481739 PGPA6NDG6 321 aa12.34□□□□□ -0.43
RXRA-202ENST00000481739 F8W735 103 aaPredicted RBP12.34□□□□□ -0.43
RXRA-202ENST00000481739 M0QZK8 103 aa12.34□□□□□ -0.43
RXRA-202ENST00000481739 OR2J3O76001 311 aa12.34□□□□□ -0.43
RXRA-202ENST00000481739 NDUFB8O95169 186 aa12.34□□□□□ -0.43
RXRA-202ENST00000481739 HOXA5P20719 270 aa12.34□□□□□ -0.43
RXRA-202ENST00000481739 LINC00518Q8N0U6 118 aa12.34□□□□□ -0.43
RXRA-202ENST00000481739 BLNKQ8WV28 456 aa12.34□□□□□ -0.43
RXRA-202ENST00000481739 FMC1Q96HJ9 113 aa12.34□□□□□ -0.43
RXRA-202ENST00000481739 CHRDL1Q9BU40 450 aa12.34□□□□□ -0.43
RXRA-202ENST00000481739 TRBV9A0A0B4J1U6 114 aa12.33□□□□□ -0.44
RXRA-202ENST00000481739 IGLV2-8P01709 118 aa12.33□□□□□ -0.44
RXRA-202ENST00000481739 TRGC1P0CF51 173 aa12.33□□□□□ -0.44
RXRA-202ENST00000481739 HNF1AP20823 631 aa12.33□□□□□ -0.44
RXRA-202ENST00000481739 UBE2G1P62253 170 aa12.33□□□□□ -0.44
RXRA-202ENST00000481739 PDE6HQ13956 83 aa12.33□□□□□ -0.44
RXRA-202ENST00000481739 RPEL1Q2QD12 228 aa12.33□□□□□ -0.44
RXRA-202ENST00000481739 FAM231DQ6ZW35 169 aa12.33□□□□□ -0.44
RXRA-202ENST00000481739 FRZBQ92765 325 aa12.33□□□□□ -0.44
RXRA-202ENST00000481739 Q9H3A6 140 aa12.33□□□□□ -0.44
RXRA-202ENST00000481739 V9GYV3 84 aa12.33□□□□□ -0.44
RXRA-202ENST00000481739 CSPG4Q6UVK1 2322 aa12.33□□□□□ -0.44
RXRA-202ENST00000481739 ACTL10Q5JWF8 245 aa12.32□□□□□ -0.44
RXRA-202ENST00000481739 BAGE2Q86Y30 109 aa12.32□□□□□ -0.44
RXRA-202ENST00000481739 CDX1P47902 265 aaPredicted RBP12.32□□□□□ -0.44
RXRA-202ENST00000481739 ECSCRQ19T08 205 aa12.32□□□□□ -0.44
RXRA-202ENST00000481739 COX19Q49B96 90 aa12.32□□□□□ -0.44
RXRA-202ENST00000481739 IBA57Q5T440 356 aaKnown RBP12.32□□□□□ -0.44
RXRA-202ENST00000481739 PITPNC1Q9UKF7 332 aa12.32□□□□□ -0.44
RXRA-202ENST00000481739 ZNF320A2RRD8 509 aa12.31□□□□□ -0.44
RXRA-202ENST00000481739 RAB9AP51151 201 aa12.31□□□□□ -0.44
RXRA-202ENST00000481739 NDUFA6P56556 154 aa12.31□□□□□ -0.44
RXRA-202ENST00000481739 LEMD1Q68G75 181 aa12.31□□□□□ -0.44
RXRA-202ENST00000481739 ZNF502Q8TBZ5 544 aa12.31□□□□□ -0.44
RXRA-202ENST00000481739 PIFOQ8TCI5 191 aa12.31□□□□□ -0.44
RXRA-202ENST00000481739 GPR82Q96P67 336 aa12.31□□□□□ -0.44
RXRA-202ENST00000481739 NOTCH2Q04721 2471 aa12.31□□□□□ -0.44
RXRA-202ENST00000481739 TRBV19A0A075B6N1 114 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 ZNF98A6NK75 572 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 TCRAP04437 139 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 CTSGP08311 255 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 SMIM6P0DI80 62 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 IGLC2P0DOY2 106 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 MGST1P10620 155 aaKnown RBP12.3□□□□□ -0.44
RXRA-202ENST00000481739 RHOGP84095 191 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 C15orf32Q32M92 178 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 CMTM2Q8TAZ6 248 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 ZNF586Q9NXT0 402 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 ZNF469Q96JG9 3925 aaPredicted RBP12.3□□□□□ -0.44
RXRA-202ENST00000481739 TRBV7-1A0A0A6YYK4 115 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 TRBV6-1A0A0K0K1D8 114 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 BMPR1BO00238 502 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 BRI3O95415 125 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 RPL7P18124 248 aaKnown RBP12.3□□□□□ -0.44
RXRA-202ENST00000481739 OR5I1Q13606 314 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 USF2Q15853 346 aaPredicted RBP12.3□□□□□ -0.44
RXRA-202ENST00000481739 ARL6IP6Q8N6S5 226 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 EEF1AKMT3Q96AZ1 226 aa12.3□□□□□ -0.44
RXRA-202ENST00000481739 FAM223BA6NKX1 122 aa12.29□□□□□ -0.44
RXRA-202ENST00000481739 FAM223AQ8IWN6 122 aa12.29□□□□□ -0.44
RXRA-202ENST00000481739 BCL6BQ8N143 479 aaPredicted RBP12.29□□□□□ -0.44
RXRA-202ENST00000481739 MYO9AB2RTY4 2548 aa12.29□□□□□ -0.44
RXRA-202ENST00000481739 OR2T8A6NH00 312 aa12.28□□□□□ -0.44
RXRA-202ENST00000481739 H3BUA1 57 aa12.28□□□□□ -0.44
RXRA-202ENST00000481739 K7EQM0 130 aa12.28□□□□□ -0.44
RXRA-202ENST00000481739 SLC17A3O00476 420 aa12.28□□□□□ -0.44
RXRA-202ENST00000481739 MRPS12O15235 138 aaKnown RBP12.28□□□□□ -0.44
RXRA-202ENST00000481739 IGF1P05019 195 aa12.28□□□□□ -0.44
RXRA-202ENST00000481739 RPL15P61313 204 aaKnown RBP12.28□□□□□ -0.44
RXRA-202ENST00000481739 LY6EQ16553 131 aa12.28□□□□□ -0.44
RXRA-202ENST00000481739 C19orf54Q5BKX5 351 aa12.28□□□□□ -0.44
RXRA-202ENST00000481739 COA6Q5JTJ3 125 aaKnown RBP12.28□□□□□ -0.44
RXRA-202ENST00000481739 TMEM219Q86XT9 240 aa12.28□□□□□ -0.44
RXRA-202ENST00000481739 RABAC1Q9UI14 185 aa12.28□□□□□ -0.44
RXRA-202ENST00000481739 TRAV41A0A0B4J266 112 aa12.27□□□□□ -0.44
RXRA-202ENST00000481739 SERTM2A0A1B0GWG4 89 aa12.27□□□□□ -0.44
RXRA-202ENST00000481739 A6NDX4 124 aa12.27□□□□□ -0.44
RXRA-202ENST00000481739 H3BUX3 64 aa12.27□□□□□ -0.44
RXRA-202ENST00000481739 LTAP01374 205 aa12.27□□□□□ -0.44
RXRA-202ENST00000481739 MEOX2P50222 304 aa12.27□□□□□ -0.44
RXRA-202ENST00000481739 GNG5P63218 68 aa12.27□□□□□ -0.44
RXRA-202ENST00000481739 DEFB112Q30KQ8 113 aa12.27□□□□□ -0.44
RXRA-202ENST00000481739 LINC00479Q96M42 142 aa12.27□□□□□ -0.44
RXRA-202ENST00000481739 RNASE7Q9H1E1 156 aaKnown RBP12.27□□□□□ -0.44
RXRA-202ENST00000481739 TRAPPC1Q9Y5R8 145 aa12.27□□□□□ -0.44
RXRA-202ENST00000481739 S4R3C0 116 aa12.27□□□□□ -0.44
RXRA-202ENST00000481739 TLN2Q9Y4G6 2542 aa12.27□□□□□ -0.44
RXRA-202ENST00000481739 SMIM27A0A1W2PRY6 76 aa12.27□□□□□ -0.45
RXRA-202ENST00000481739 ZNF705GA8MUZ8 300 aaPredicted RBP12.27□□□□□ -0.45
RXRA-202ENST00000481739 MT-ND6P03923 174 aa12.27□□□□□ -0.45
RXRA-202ENST00000481739 MLST8Q9BVC4 326 aa12.27□□□□□ -0.45
RXRA-202ENST00000481739 TRAV34A0A0B4J273 112 aa12.26□□□□□ -0.45
RXRA-202ENST00000481739 ZNF253O75346 499 aa12.26□□□□□ -0.45
RXRA-202ENST00000481739 FSHBP01225 129 aa12.26□□□□□ -0.45
RXRA-202ENST00000481739 AMY1AP04745 511 aa12.26□□□□□ -0.45
RXRA-202ENST00000481739 ADMP35318 185 aa12.26□□□□□ -0.45
RXRA-202ENST00000481739 PSG9Q00887 426 aa12.26□□□□□ -0.45
RXRA-202ENST00000481739 WDR73Q6P4I2 378 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms