RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 RNF223E7ERA6 249 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 CA1P00915 261 aaPredicted RBP7.73□□□□□ -1.17
GARNL3-216ENST00000481242 IGLV1-44P01699 117 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 IGHV1-69P01742 117 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 CD33P20138 364 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 CBLN1P23435 193 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 KLHDC3Q9BQ90 382 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 SPXQ9BT56 116 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 BEX4Q9NWD9 120 aaPredicted RBP7.73□□□□□ -1.17
GARNL3-216ENST00000481242 ATP5L2Q7Z4Y8 100 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 FER1L5A0AVI2 2057 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 APOHP02749 345 aaPredicted RBP7.73□□□□□ -1.17
GARNL3-216ENST00000481242 FOXA3P55318 350 aaPredicted RBP7.73□□□□□ -1.17
GARNL3-216ENST00000481242 SUPT4H1P63272 117 aaKnown RBP7.73□□□□□ -1.17
GARNL3-216ENST00000481242 PRR30Q53SZ7 412 aaPredicted RBP7.73□□□□□ -1.17
GARNL3-216ENST00000481242 DAZ1Q9NQZ3 744 aaKnown RBP7.73□□□□□ -1.17
GARNL3-216ENST00000481242 TANC1Q9C0D5 1861 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 IGLV3-9A0A075B6K5 115 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 QRFPP83859 136 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 PRB3Q04118 309 aaPredicted RBP7.73□□□□□ -1.17
GARNL3-216ENST00000481242 C10orf55Q5SWW7 151 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 C11orf44Q8N8P7 122 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 KLHL30-AS1Q8NEE0 82 aa7.73□□□□□ -1.17
GARNL3-216ENST00000481242 LOC107984156A0A0G2JMH3 177 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 CRPP02741 224 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 IGFL2Q6UWQ7 119 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 LINC01551Q86U37 167 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 ARL17AQ8IVW1 177 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 LINC00311Q8N616 119 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 SLC25A39Q9BZJ4 359 aaPredicted RBP7.72□□□□□ -1.17
GARNL3-216ENST00000481242 PROK2Q9HC23 129 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 LINC00527Q9UJ94 153 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 TICRRQ7Z2Z1 1910 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 MED13LQ71F56 2210 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 IGHV2-70DA0A0C4DH43 119 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 CNTFRP26992 372 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 ZNF138P52744 262 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 ERVK11-1P61568 191 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 ZNF415Q09FC8 603 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 FHL1Q13642 323 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 MUC21Q5SSG8 566 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 KIR3DL3Q8N743 410 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 MCRIP2Q9BUT9 160 aaKnown RBP7.72□□□□□ -1.17
GARNL3-216ENST00000481242 KIAA2026Q5HYC2 2103 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 DOCK10Q96BY6 2186 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 A0A1B0GWB2 263 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 NDUFB8O95169 186 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 RPL23P62829 140 aaKnown RBP7.72□□□□□ -1.17
GARNL3-216ENST00000481242 SRSF1Q07955 248 aaKnown RBP eCLIP7.72□□□□□ -1.17
GARNL3-216ENST00000481242 TTC9CQ8N5M4 171 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 PTPRDP23468 1912 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 SCN8AQ9UQD0 1980 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 GTF3C1Q12789 2109 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 H3BVH4 76 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 PYYP10082 97 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 TCF15Q12870 199 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 PDE6HQ13956 83 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 TMEM95Q3KNT9 176 aa7.72□□□□□ -1.17
GARNL3-216ENST00000481242 LYPD2Q6UXB3 125 aa7.71□□□□□ -1.17
GARNL3-216ENST00000481242 LCNL1Q6ZST4 164 aa7.71□□□□□ -1.17
GARNL3-216ENST00000481242 FAM110DQ8TAY7 271 aaPredicted RBP7.71□□□□□ -1.17
GARNL3-216ENST00000481242 CYTL1Q9NRR1 136 aa7.71□□□□□ -1.17
GARNL3-216ENST00000481242 ZGRF1Q86YA3 2104 aa7.71□□□□□ -1.17
GARNL3-216ENST00000481242 TOMM40O96008 361 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 IGKV1-5P01602 117 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 ADCYAP1P18509 176 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 SRSF3P84103 164 aaKnown RBP7.71□□□□□ -1.18
GARNL3-216ENST00000481242 HSD52Q0P140 79 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 C1orf122Q6ZSJ8 110 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 NRN1Q9NPD7 142 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 MRPL16Q9NX20 251 aaKnown RBP7.71□□□□□ -1.18
GARNL3-216ENST00000481242 LYL1P12980 280 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 GAGE2BQ13066 116 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 GAGE2EQ4V326 116 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 TEX36Q5VZQ5 186 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 TSKUQ8WUA8 353 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 VGLL1Q99990 258 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 TMEM160Q9NX00 188 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 KAAG1Q9UBP8 84 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 GAGE2DQ9UEU5 116 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 CUL9Q8IWT3 2517 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 PMS2P5A8MQ11 134 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 MALP21145 153 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 RPL36AP83881 106 aaKnown RBP7.71□□□□□ -1.18
GARNL3-216ENST00000481242 CR1LQ2VPA4 569 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 GLMPQ8WWB7 406 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 RPL36ALQ969Q0 106 aaKnown RBP7.71□□□□□ -1.18
GARNL3-216ENST00000481242 RSPO3Q9BXY4 272 aaPredicted RBP7.71□□□□□ -1.18
GARNL3-216ENST00000481242 FAM215AQ9Y5M1 114 aa7.71□□□□□ -1.18
GARNL3-216ENST00000481242 LRRK1Q38SD2 2015 aa7.7□□□□□ -1.18
GARNL3-216ENST00000481242 A0A087WX48 190 aa7.7□□□□□ -1.18
GARNL3-216ENST00000481242 INSP01308 110 aa7.7□□□□□ -1.18
GARNL3-216ENST00000481242 OR9G4Q8NGQ1 327 aa7.7□□□□□ -1.18
GARNL3-216ENST00000481242 Q96MF0 132 aa7.7□□□□□ -1.18
GARNL3-216ENST00000481242 LY96Q9Y6Y9 160 aa7.7□□□□□ -1.18
GARNL3-216ENST00000481242 PHF3Q92576 2039 aaKnown RBP7.7□□□□□ -1.18
GARNL3-216ENST00000481242 GFI1BQ5VTD9 330 aa7.7□□□□□ -1.18
GARNL3-216ENST00000481242 NLRC5Q86WI3 1866 aa7.7□□□□□ -1.18
GARNL3-216ENST00000481242 DMRTC2Q8IXT2 367 aaPredicted RBP7.69□□□□□ -1.18
GARNL3-216ENST00000481242 RHPN1-AS1Q9BWJ2 59 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms