RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 D6R8Y8 96 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 K7ERJ3 54 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 SLC25A17O43808 307 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 CRYGCP07315 174 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 GAGE13Q4V321 117 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 FAM104BQ5XKR9 115 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 OR10X1Q8NGY0 326 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 C8orf46Q8TAG6 207 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 RND1Q92730 232 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 NHP2Q9NX24 153 aaKnown RBP8.5□□□□□ -1.05
SIK3-210ENST00000480468 SSUH2Q9Y2M2 353 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 SPEGQ15772 3267 aa8.5□□□□□ -1.05
SIK3-210ENST00000480468 WI2-2373I1.2A0A1W2PRP0 233 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 hADV38S2A0JD32 116 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 CCL4P13236 92 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 ORM2P19652 201 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 EVI2AP22794 236 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 CFAP161Q6P656 301 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 SH2D6Q7Z4S9 175 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 SAP25Q8TEE9 199 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 ARPC1AQ92747 370 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 TMEM14CQ9P0S9 112 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 DKK2Q9UBU2 259 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 HHLA3Q9XRX5 114 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 LINC00312Q9Y6C7 94 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 TRBV25-1A0A075B6N4 114 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 LINC01546A6NGU7 62 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 WT1-ASQ06250 92 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 KLRD1Q13241 179 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 MBNL2Q5VZF2 373 aaKnown RBP8.49□□□□□ -1.05
SIK3-210ENST00000480468 C8orf86Q6ZUL3 223 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 PRNTQ86SH4 94 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 TMEM75Q8N9X5 138 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 TMEM167AQ8TBQ9 72 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 MRPL36Q9P0J6 103 aaKnown RBP8.49□□□□□ -1.05
SIK3-210ENST00000480468 CYSLTR1Q9Y271 337 aa8.49□□□□□ -1.05
SIK3-210ENST00000480468 LOC389332A0A1B0GUA5 103 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 IGKV3-15P01624 115 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 IGHV1-2P23083 117 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 TCTAP57738 103 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 PVRIGQ6DKI7 326 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 ZNRF1Q8ND25 227 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 DSCAML1Q8TD84 2053 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 DNAJC13O75165 2243 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 SDK1Q7Z5N4 2213 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 FAM186AA6NE01 2351 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 IGKV2D-26A0A0A0MRZ7 120 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 TRAV8-1A0A0A6YYK1 113 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 PCNX2A6NKB5 2137 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 H3BMG7 143 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 KNTC1P50748 2209 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 ODF1Q14990 250 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 C3AR1Q16581 482 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 ZNF562Q6V9R5 426 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 ZNF833PQ6ZTB9 187 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 GOLT1AQ6ZVE7 132 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 HARBI1Q96MB7 349 aa8.48□□□□□ -1.05
SIK3-210ENST00000480468 CGB1A6NKQ9 187 aa8.47□□□□□ -1.05
SIK3-210ENST00000480468 NPIPB5A8MRT5 1133 aa8.47□□□□□ -1.05
SIK3-210ENST00000480468 RRN3P1Q2M238 152 aa8.47□□□□□ -1.05
SIK3-210ENST00000480468 C12orf74Q32Q52 190 aa8.47□□□□□ -1.05
SIK3-210ENST00000480468 FLYWCH2Q96CP2 140 aaKnown RBP8.47□□□□□ -1.05
SIK3-210ENST00000480468 MRPS17Q9Y2R5 130 aaKnown RBP8.47□□□□□ -1.05
SIK3-210ENST00000480468 TANC2Q9HCD6 1990 aa8.46□□□□□ -1.05
SIK3-210ENST00000480468 A0A1B0GWB2 263 aa8.46□□□□□ -1.05
SIK3-210ENST00000480468 E7EUB6 86 aa8.46□□□□□ -1.05
SIK3-210ENST00000480468 LINC01619G3V211 115 aa8.46□□□□□ -1.05
SIK3-210ENST00000480468 NTN3O00634 580 aaPredicted RBP8.46□□□□□ -1.05
SIK3-210ENST00000480468 ATP5G2Q06055 141 aa8.46□□□□□ -1.05
SIK3-210ENST00000480468 KLF17Q5JT82 389 aaPredicted RBP8.46□□□□□ -1.05
SIK3-210ENST00000480468 HES7Q9BYE0 225 aa8.46□□□□□ -1.05
SIK3-210ENST00000480468 CDIP1Q9H305 208 aa8.46□□□□□ -1.05
SIK3-210ENST00000480468 ZNF71Q9NQZ8 489 aaPredicted RBP8.46□□□□□ -1.05
SIK3-210ENST00000480468 RPUSD1Q9UJJ7 312 aaKnown RBP8.46□□□□□ -1.05
SIK3-210ENST00000480468 IGHV3OR15-7A0A075B7D8 119 aa8.46□□□□□ -1.06
SIK3-210ENST00000480468 KLRC4-KLRK1H3BQV0 150 aa8.46□□□□□ -1.06
SIK3-210ENST00000480468 CCL11P51671 97 aa8.46□□□□□ -1.06
SIK3-210ENST00000480468 FOXI1Q12951 378 aa8.46□□□□□ -1.06
SIK3-210ENST00000480468 MRPL51Q4U2R6 128 aaKnown RBP8.46□□□□□ -1.06
SIK3-210ENST00000480468 C1QTNF4Q9BXJ3 329 aa8.46□□□□□ -1.06
SIK3-210ENST00000480468 SLC25A39Q9BZJ4 359 aaPredicted RBP8.46□□□□□ -1.06
SIK3-210ENST00000480468 ERG28Q9UKR5 140 aa8.46□□□□□ -1.06
SIK3-210ENST00000480468 TM4SF5O14894 197 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 APOMO95445 188 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 LHBP01229 141 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 IGKCP01834 107 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 AMN1Q8IY45 258 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 HIGD1AQ9Y241 93 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 SPTBN5Q9NRC6 3674 aaKnown RBP8.45□□□□□ -1.06
SIK3-210ENST00000480468 SERTM2A0A1B0GWG4 89 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 C16orf97H3BN30 126 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 LYZL6O75951 148 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 SPINK8P0C7L1 97 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 INSL3P51460 131 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 HES3Q5TGS1 186 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 C20orf78Q9BR46 151 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 VCX2Q9H322 139 aa8.45□□□□□ -1.06
SIK3-210ENST00000480468 CFAP54Q96N23 3096 aa8.44□□□□□ -1.06
SIK3-210ENST00000480468 H3BTX0 84 aa8.44□□□□□ -1.06
SIK3-210ENST00000480468 ATP5LO75964 103 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms