RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 STXBP6Q8NFX7 210 aa13.4□□□□□ -0.26
UPF3A-206ENST00000480362 DLX4Q92988 240 aaPredicted RBP13.4□□□□□ -0.26
UPF3A-206ENST00000480362 MARC2Q969Z3 335 aa13.4□□□□□ -0.26
UPF3A-206ENST00000480362 NARS2Q96I59 477 aaKnown RBP13.4□□□□□ -0.26
UPF3A-206ENST00000480362 CITED1Q99966 193 aa13.4□□□□□ -0.26
UPF3A-206ENST00000480362 A8MWP6 167 aa13.39□□□□□ -0.27
UPF3A-206ENST00000480362 EDN2P20800 178 aa13.39□□□□□ -0.27
UPF3A-206ENST00000480362 MYCNOSP40205 109 aa13.39□□□□□ -0.27
UPF3A-206ENST00000480362 PSMB3P49720 205 aa13.39□□□□□ -0.27
UPF3A-206ENST00000480362 C1orf194Q5T5A4 169 aa13.39□□□□□ -0.27
UPF3A-206ENST00000480362 BPIFA4PQ86YQ2 179 aa13.39□□□□□ -0.27
UPF3A-206ENST00000480362 OR8I2Q8N0Y5 310 aa13.39□□□□□ -0.27
UPF3A-206ENST00000480362 MED9Q9NWA0 146 aa13.39□□□□□ -0.27
UPF3A-206ENST00000480362 TMEM14CQ9P0S9 112 aa13.39□□□□□ -0.27
UPF3A-206ENST00000480362 GNG13Q9P2W3 67 aa13.39□□□□□ -0.27
UPF3A-206ENST00000480362 SMPXQ9UHP9 88 aa13.39□□□□□ -0.27
UPF3A-206ENST00000480362 TMEM213A2RRL7 107 aa13.38□□□□□ -0.27
UPF3A-206ENST00000480362 SNRPCP09234 159 aaKnown RBP13.38□□□□□ -0.27
UPF3A-206ENST00000480362 GP9P14770 177 aa13.38□□□□□ -0.27
UPF3A-206ENST00000480362 UBE2L3P68036 154 aaKnown RBP13.38□□□□□ -0.27
UPF3A-206ENST00000480362 C16orf54Q6UWD8 224 aa13.38□□□□□ -0.27
UPF3A-206ENST00000480362 COMMD7Q86VX2 200 aa13.38□□□□□ -0.27
UPF3A-206ENST00000480362 TMEM158Q8WZ71 300 aa13.38□□□□□ -0.27
UPF3A-206ENST00000480362 FXYD5Q96DB9 178 aa13.38□□□□□ -0.27
UPF3A-206ENST00000480362 TMEM167BQ9NRX6 74 aa13.38□□□□□ -0.27
UPF3A-206ENST00000480362 A0A1W2PS18 150 aa13.37□□□□□ -0.27
UPF3A-206ENST00000480362 MRPS12O15235 138 aaKnown RBP13.37□□□□□ -0.27
UPF3A-206ENST00000480362 RPL7P18124 248 aaKnown RBP13.37□□□□□ -0.27
UPF3A-206ENST00000480362 PMS2P11Q13670 270 aa13.37□□□□□ -0.27
UPF3A-206ENST00000480362 NDUFA5Q16718 116 aa13.37□□□□□ -0.27
UPF3A-206ENST00000480362 HAGHQ16775 308 aa13.37□□□□□ -0.27
UPF3A-206ENST00000480362 SUN5Q8TC36 379 aa13.37□□□□□ -0.27
UPF3A-206ENST00000480362 GRAMD2BQ96HH9 432 aa13.37□□□□□ -0.27
UPF3A-206ENST00000480362 RHPN1-AS1Q9BWJ2 59 aa13.37□□□□□ -0.27
UPF3A-206ENST00000480362 PEMTQ9UBM1 199 aa13.37□□□□□ -0.27
UPF3A-206ENST00000480362 NIPBLQ6KC79 2804 aaeCLIP13.36□□□□□ -0.27
UPF3A-206ENST00000480362 JMJD1CQ15652 2540 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 C2orf70A6NJV1 201 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 H3BQ15 152 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 CHEK1O14757 476 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 NBEAP1P0C6P0 100 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 HIST1H1EP10412 219 aaKnown RBP13.36□□□□□ -0.27
UPF3A-206ENST00000480362 PPT1P50897 306 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 RIPPLY3P57055 190 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 SLC7A5P1Q8MH63 180 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 OR4F17Q8NGA8 305 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 OR9G4Q8NGQ1 327 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 FAM210AQ96ND0 272 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 GPR82Q96P67 336 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 OR4F4Q96R69 305 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 ZNF586Q9NXT0 402 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 SMAD5-AS1Q9Y6J3 95 aa13.36□□□□□ -0.27
UPF3A-206ENST00000480362 RBFOX3A6NFN3 312 aa13.35□□□□□ -0.27
UPF3A-206ENST00000480362 PAGE4O60829 102 aa13.35□□□□□ -0.27
UPF3A-206ENST00000480362 IFNA1P01562 189 aa13.35□□□□□ -0.27
UPF3A-206ENST00000480362 IGLC2P0DOY2 106 aa13.35□□□□□ -0.27
UPF3A-206ENST00000480362 CBLN1P23435 193 aa13.35□□□□□ -0.27
UPF3A-206ENST00000480362 UBE2G2P60604 165 aa13.35□□□□□ -0.27
UPF3A-206ENST00000480362 GUK1Q16774 197 aa13.35□□□□□ -0.27
UPF3A-206ENST00000480362 BLNKQ8WV28 456 aa13.35□□□□□ -0.27
UPF3A-206ENST00000480362 GLMPQ8WWB7 406 aa13.35□□□□□ -0.27
UPF3A-206ENST00000480362 ZNF747Q9BV97 191 aa13.35□□□□□ -0.27
UPF3A-206ENST00000480362 TMEM231Q9H6L2 316 aa13.35□□□□□ -0.27
UPF3A-206ENST00000480362 MANBALQ9NQG1 85 aa13.35□□□□□ -0.27
UPF3A-206ENST00000480362 RAB19A4D1S5 217 aa13.34□□□□□ -0.27
UPF3A-206ENST00000480362 ZNF785A8K8V0 405 aa13.34□□□□□ -0.27
UPF3A-206ENST00000480362 H3BTX0 84 aa13.34□□□□□ -0.27
UPF3A-206ENST00000480362 OVOL1O14753 267 aa13.34□□□□□ -0.27
UPF3A-206ENST00000480362 FOLR2P14207 255 aa13.34□□□□□ -0.27
UPF3A-206ENST00000480362 BMI1P35226 326 aa13.34□□□□□ -0.27
UPF3A-206ENST00000480362 GALR1P47211 349 aa13.34□□□□□ -0.27
UPF3A-206ENST00000480362 TOR2AQ5JU69 321 aa13.34□□□□□ -0.27
UPF3A-206ENST00000480362 C12orf54Q6X4T0 127 aa13.34□□□□□ -0.27
UPF3A-206ENST00000480362 C17orf77Q96MU5 243 aa13.34□□□□□ -0.27
UPF3A-206ENST00000480362 RARRES2Q99969 163 aa13.34□□□□□ -0.27
UPF3A-206ENST00000480362 ELOVL1Q9BW60 279 aa13.34□□□□□ -0.27
UPF3A-206ENST00000480362 EIF5A2Q9GZV4 153 aaKnown RBP13.34□□□□□ -0.27
UPF3A-206ENST00000480362 LOC102723971A0A1B0GUV8 181 aa13.33□□□□□ -0.28
UPF3A-206ENST00000480362 M0QZ24 198 aa13.33□□□□□ -0.28
UPF3A-206ENST00000480362 CSN3P07498 182 aa13.33□□□□□ -0.28
UPF3A-206ENST00000480362 BCL2P10415 239 aa13.33□□□□□ -0.28
UPF3A-206ENST00000480362 ATF4P18848 351 aaPredicted RBP13.33□□□□□ -0.28
UPF3A-206ENST00000480362 SRSF3P84103 164 aaKnown RBP13.33□□□□□ -0.28
UPF3A-206ENST00000480362 SIGLEC15Q6ZMC9 328 aa13.33□□□□□ -0.28
UPF3A-206ENST00000480362 ADAMTSL5Q6ZMM2 481 aa13.33□□□□□ -0.28
UPF3A-206ENST00000480362 C3orf56Q8N813 242 aa13.33□□□□□ -0.28
UPF3A-206ENST00000480362 YTHDF2Q9Y5A9 579 aaKnown RBP13.33□□□□□ -0.28
UPF3A-206ENST00000480362 SELENOKQ9Y6D0 94 aa13.33□□□□□ -0.28
UPF3A-206ENST00000480362 FAM74A7A6NL05 159 aa13.32□□□□□ -0.28
UPF3A-206ENST00000480362 PF4P02776 101 aa13.32□□□□□ -0.28
UPF3A-206ENST00000480362 ZNF506Q5JVG8 444 aa13.32□□□□□ -0.28
UPF3A-206ENST00000480362 CST9LP1Q5W188 147 aa13.32□□□□□ -0.28
UPF3A-206ENST00000480362 RXFP4Q8TDU9 374 aa13.32□□□□□ -0.28
UPF3A-206ENST00000480362 VAX2Q9UIW0 290 aa13.32□□□□□ -0.28
UPF3A-206ENST00000480362 TRBV19A0A075B6N1 114 aa13.31□□□□□ -0.28
UPF3A-206ENST00000480362 A0A087X0K7 114 aa13.31□□□□□ -0.28
UPF3A-206ENST00000480362 HELTA6NFD8 242 aa13.31□□□□□ -0.28
UPF3A-206ENST00000480362 TAGLN2P37802 199 aaKnown RBP13.31□□□□□ -0.28
UPF3A-206ENST00000480362 RANP62826 216 aaKnown RBP13.31□□□□□ -0.28
UPF3A-206ENST00000480362 ICAM4Q14773 271 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms