RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 LTAP01374 205 aa10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 FLYWCH2Q96CP2 140 aaKnown RBP10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 TMEM191AQ9H0A3 160 aa10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 LINC00312Q9Y6C7 94 aa10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 A0A1W2PPI3 338 aa10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 OVOL3O00110 214 aa10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 NCR2O95944 276 aa10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 RBPMS2Q6ZRY4 209 aaKnown RBP10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 THAP8Q8NA92 274 aa10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 PRSS33Q8NF86 280 aa10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 NUP37Q8NFH4 326 aa10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 OR5AN1Q8NGI8 311 aa10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 RAB9BQ9NP90 201 aa10.62□□□□□ -0.71
PDZRN3-208ENST00000479530 ABCA4P78363 2273 aa10.61□□□□□ -0.71
PDZRN3-208ENST00000479530 CHEK1O14757 476 aa10.61□□□□□ -0.71
PDZRN3-208ENST00000479530 APOA2P02652 100 aa10.61□□□□□ -0.71
PDZRN3-208ENST00000479530 TCRAP04437 139 aa10.61□□□□□ -0.71
PDZRN3-208ENST00000479530 MAP1LC3CQ9BXW4 147 aa10.61□□□□□ -0.71
PDZRN3-208ENST00000479530 APOHP02749 345 aaPredicted RBP10.61□□□□□ -0.71
PDZRN3-208ENST00000479530 LIPFP07098 398 aa10.61□□□□□ -0.71
PDZRN3-208ENST00000479530 TCTAP57738 103 aa10.61□□□□□ -0.71
PDZRN3-208ENST00000479530 C12orf54Q6X4T0 127 aa10.61□□□□□ -0.71
PDZRN3-208ENST00000479530 C2orf91Q6ZV80 131 aa10.61□□□□□ -0.71
PDZRN3-208ENST00000479530 NEU4Q8WWR8 484 aaPredicted RBP10.61□□□□□ -0.71
PDZRN3-208ENST00000479530 Q9H3A6 140 aa10.61□□□□□ -0.71
PDZRN3-208ENST00000479530 ZNF785A8K8V0 405 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 LYNX1G3V0Z9 82 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 TMEM178BH3BS89 294 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 SLC25A17O43808 307 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 IGLV2-23P01705 113 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 LYNX1P0DP58 116 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 GP9P14770 177 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 TMEM167AQ8TBQ9 72 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 GAGE12BA1L429 117 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 FAM106CPP0CH98 169 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 FAM106AQ4KMX7 169 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 DAZAP1Q96EP5 407 aaKnown RBP10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 PERPQ96FX8 193 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 NDFIP1Q9BT67 221 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 PPIAL4EA0A075B759 164 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 PPIAL4DF5H284 164 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 PPIAL4FP0DN26 164 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 COL8A1P27658 744 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 MRGPRG-AS1Q2M3A8 158 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 EXOC3-AS1Q8N2X6 119 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 SSUH2Q9Y2M2 353 aa10.6□□□□□ -0.71
PDZRN3-208ENST00000479530 MALRD1Q5VYJ5 2156 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 INS-IGF2F8WCM5 200 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 PRRG2O14669 202 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 TNFRSF1AP19438 455 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 GPR183P32249 361 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 ARF6P62330 175 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 CT83Q5H943 113 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 FAM162BQ5T6X4 162 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 PET117Q6UWS5 81 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 C5orf17Q8NAS9 161 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 OR4C13Q8NGP0 309 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 OR10X1Q8NGY0 326 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 FMC1Q96HJ9 113 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 CD5LO43866 347 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 SAP30O75446 220 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 HIST1H1AQ02539 215 aaPredicted RBP10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 GFRALQ6UXV0 394 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 ZNF492Q9P255 531 aa10.59□□□□□ -0.71
PDZRN3-208ENST00000479530 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 TNFRSF13BO14836 293 aaPredicted RBP10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 IGLV2-11P01706 119 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 ARMS2P0C7Q2 107 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 HTR1DP28221 377 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 LINC01545Q5VT33 79 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 PRNTQ86SH4 94 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 IGFBPL1Q8WX77 278 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 SMIM12Q96EX1 92 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 NAA38Q9BRA0 125 aaKnown RBP10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 C7orf71A4D174 169 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 E7EQL1 145 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 NPIPB6E9PJ23 425 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 HLA-DRB1P01911 266 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 OR5AL1P0C617 328 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 CNTFRP26992 372 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 LOXP28300 417 aaPredicted RBP10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 UQCRFS1P47985 274 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 LOXL1Q08397 574 aaPredicted RBP10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 Q86TA4 180 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 SOX21Q9Y651 276 aaPredicted RBP10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 ATRXP46100 2492 aa10.58□□□□□ -0.72
PDZRN3-208ENST00000479530 SUB1P53999 127 aaKnown RBP eCLIP10.57□□□□□ -0.72
PDZRN3-208ENST00000479530 GOLT1AQ6ZVE7 132 aa10.57□□□□□ -0.72
PDZRN3-208ENST00000479530 PIP4P2Q8N4L2 257 aa10.57□□□□□ -0.72
PDZRN3-208ENST00000479530 STXBP6Q8NFX7 210 aa10.57□□□□□ -0.72
PDZRN3-208ENST00000479530 GFRA4Q9GZZ7 299 aa10.57□□□□□ -0.72
PDZRN3-208ENST00000479530 COX8AP10176 69 aa10.57□□□□□ -0.72
PDZRN3-208ENST00000479530 TMEM116Q8NCL8 245 aa10.57□□□□□ -0.72
PDZRN3-208ENST00000479530 RNASE6Q93091 150 aaKnown RBP10.57□□□□□ -0.72
PDZRN3-208ENST00000479530 ZNF747Q9BV97 191 aa10.57□□□□□ -0.72
PDZRN3-208ENST00000479530 SHISA9B4DS77 424 aa10.56□□□□□ -0.72
PDZRN3-208ENST00000479530 HAX1O00165 279 aa10.56□□□□□ -0.72
PDZRN3-208ENST00000479530 ENSAO43768 121 aaKnown RBP10.56□□□□□ -0.72
PDZRN3-208ENST00000479530 APOBEC3AP31941 199 aaPredicted RBP10.56□□□□□ -0.72
PDZRN3-208ENST00000479530 FXYD7P58549 80 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms