RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 GGACTQ9BVM4 153 aa0.74□□□□□ -2.29
CCDC58-204ENST00000479414 NPCDR1Q9BY65 106 aa0.74□□□□□ -2.29
CCDC58-204ENST00000479414 CACNA1AO00555 2505 aa0.73□□□□□ -2.29
CCDC58-204ENST00000479414 SRCAPQ6ZRS2 3230 aa0.73□□□□□ -2.29
CCDC58-204ENST00000479414 INSL3P51460 131 aa0.73□□□□□ -2.29
CCDC58-204ENST00000479414 C4orf22Q6V702 233 aa0.73□□□□□ -2.29
CCDC58-204ENST00000479414 PHB2Q99623 299 aa0.73□□□□□ -2.29
CCDC58-204ENST00000479414 LY96Q9Y6Y9 160 aa0.73□□□□□ -2.29
CCDC58-204ENST00000479414 SIP14410 1827 aa0.73□□□□□ -2.29
CCDC58-204ENST00000479414 TNS3Q68CZ2 1445 aa0.72□□□□□ -2.29
CCDC58-204ENST00000479414 ERCC6L2Q5T890 1561 aa0.72□□□□□ -2.29
CCDC58-204ENST00000479414 GRINAQ7Z429 371 aa0.72□□□□□ -2.29
CCDC58-204ENST00000479414 CECR2Q9BXF3 1484 aa0.72□□□□□ -2.29
CCDC58-204ENST00000479414 MGAMO43451 1857 aa0.71□□□□□ -2.3
CCDC58-204ENST00000479414 FREM3P0C091 2139 aa0.71□□□□□ -2.3
CCDC58-204ENST00000479414 BANF1O75531 89 aa0.71□□□□□ -2.3
CCDC58-204ENST00000479414 CRHP06850 196 aa0.71□□□□□ -2.3
CCDC58-204ENST00000479414 HLA-EP13747 358 aa0.71□□□□□ -2.3
CCDC58-204ENST00000479414 NFYBP25208 207 aa0.71□□□□□ -2.3
CCDC58-204ENST00000479414 GNG5P63218 68 aa0.71□□□□□ -2.3
CCDC58-204ENST00000479414 EIF5AL1Q6IS14 154 aaKnown RBP0.71□□□□□ -2.3
CCDC58-204ENST00000479414 C2orf82Q6UX34 121 aa0.71□□□□□ -2.3
CCDC58-204ENST00000479414 CANT1Q8WVQ1 401 aa0.71□□□□□ -2.3
CCDC58-204ENST00000479414 POP5Q969H6 163 aaKnown RBP0.71□□□□□ -2.3
CCDC58-204ENST00000479414 NUP210LQ5VU65 1888 aa0.71□□□□□ -2.3
CCDC58-204ENST00000479414 CAMSAP1Q5T5Y3 1602 aa0.71□□□□□ -2.3
CCDC58-204ENST00000479414 PKD1L2Q7Z442 2459 aa0.7□□□□□ -2.3
CCDC58-204ENST00000479414 CEP164Q9UPV0 1460 aa0.7□□□□□ -2.3
CCDC58-204ENST00000479414 OR2T8A6NH00 312 aa0.7□□□□□ -2.3
CCDC58-204ENST00000479414 RAB37Q96AX2 223 aa0.7□□□□□ -2.3
CCDC58-204ENST00000479414 ZC2HC1AQ96GY0 325 aa0.7□□□□□ -2.3
CCDC58-204ENST00000479414 TEX37Q96LM6 180 aa0.7□□□□□ -2.3
CCDC58-204ENST00000479414 F8W1H4 67 aa0.69□□□□□ -2.3
CCDC58-204ENST00000479414 ATP5HO75947 161 aa0.69□□□□□ -2.3
CCDC58-204ENST00000479414 ERC2-IT1O76042 136 aa0.69□□□□□ -2.3
CCDC58-204ENST00000479414 CXCL1P09341 107 aa0.69□□□□□ -2.3
CCDC58-204ENST00000479414 CDK6Q00534 326 aa0.69□□□□□ -2.3
CCDC58-204ENST00000479414 HACD4Q5VWC8 232 aa0.69□□□□□ -2.3
CCDC58-204ENST00000479414 ZHX1-C8orf76Q96EF9 292 aa0.69□□□□□ -2.3
CCDC58-204ENST00000479414 PRNDQ9UKY0 176 aa0.69□□□□□ -2.3
CCDC58-204ENST00000479414 ASB4Q9Y574 426 aa0.69□□□□□ -2.3
CCDC58-204ENST00000479414 FANCMQ8IYD8 2048 aa0.69□□□□□ -2.3
CCDC58-204ENST00000479414 CEP350Q5VT06 3117 aa0.69□□□□□ -2.3
CCDC58-204ENST00000479414 M0R233 179 aa0.68□□□□□ -2.3
CCDC58-204ENST00000479414 GGCTO75223 188 aaKnown RBP0.68□□□□□ -2.3
CCDC58-204ENST00000479414 MYL5Q02045 173 aa0.68□□□□□ -2.3
CCDC58-204ENST00000479414 DHRS4L2Q6PKH6 230 aa0.68□□□□□ -2.3
CCDC58-204ENST00000479414 PLPP5Q8NEB5 264 aa0.68□□□□□ -2.3
CCDC58-204ENST00000479414 CHMP6Q96FZ7 201 aa0.68□□□□□ -2.3
CCDC58-204ENST00000479414 FRAS1Q86XX4 4008 aa0.67□□□□□ -2.3
CCDC58-204ENST00000479414 USP24Q9UPU5 2620 aa0.67□□□□□ -2.3
CCDC58-204ENST00000479414 A0A087WSZ3 146 aa0.67□□□□□ -2.3
CCDC58-204ENST00000479414 CXCL8P10145 99 aa0.67□□□□□ -2.3
CCDC58-204ENST00000479414 ARPP19P56211 112 aa0.67□□□□□ -2.3
CCDC58-204ENST00000479414 MRPS25P82663 173 aaKnown RBP0.67□□□□□ -2.3
CCDC58-204ENST00000479414 TMEM14EPQ6UXP3 125 aa0.67□□□□□ -2.3
CCDC58-204ENST00000479414 PXT1Q8NFP0 134 aa0.67□□□□□ -2.3
CCDC58-204ENST00000479414 PAIP2Q9BPZ3 127 aaKnown RBP0.67□□□□□ -2.3
CCDC58-204ENST00000479414 CCDC94Q9BW85 323 aaPredicted RBP0.67□□□□□ -2.3
CCDC58-204ENST00000479414 POPDC3Q9HBV1 291 aa0.67□□□□□ -2.3
CCDC58-204ENST00000479414 SS18L2Q9UHA2 77 aa0.67□□□□□ -2.3
CCDC58-204ENST00000479414 TNFSF18Q9UNG2 199 aa0.67□□□□□ -2.3
CCDC58-204ENST00000479414 APCP25054 2843 aa0.67□□□□□ -2.3
CCDC58-204ENST00000479414 RFX7Q2KHR2 1363 aa0.67□□□□□ -2.3
CCDC58-204ENST00000479414 N4BP2Q86UW6 1770 aaPredicted RBP0.66□□□□□ -2.3
CCDC58-204ENST00000479414 UBR2Q8IWV8 1755 aa0.66□□□□□ -2.3
CCDC58-204ENST00000479414 A0A1W2PPM0 123 aa0.66□□□□□ -2.3
CCDC58-204ENST00000479414 H3BRM9 83 aa0.66□□□□□ -2.3
CCDC58-204ENST00000479414 K7ERJ3 54 aa0.66□□□□□ -2.3
CCDC58-204ENST00000479414 TMBIM6P55061 237 aa0.66□□□□□ -2.3
CCDC58-204ENST00000479414 HAGHLQ6PII5 290 aaPredicted RBP0.66□□□□□ -2.3
CCDC58-204ENST00000479414 OR5D16Q8NGK9 328 aa0.66□□□□□ -2.3
CCDC58-204ENST00000479414 OR4K15Q8NH41 348 aa0.66□□□□□ -2.3
CCDC58-204ENST00000479414 CHCHD1Q96BP2 118 aaKnown RBP0.66□□□□□ -2.3
CCDC58-204ENST00000479414 CEP19Q96LK0 163 aa0.66□□□□□ -2.3
CCDC58-204ENST00000479414 ASH1LQ9NR48 2969 aaKnown RBP0.66□□□□□ -2.3
CCDC58-204ENST00000479414 PYCARDQ9ULZ3 195 aa0.66□□□□□ -2.3
CCDC58-204ENST00000479414 ARL5AQ9Y689 179 aa0.66□□□□□ -2.3
CCDC58-204ENST00000479414 KDM6AO15550 1401 aaPredicted RBP0.65□□□□□ -2.3
CCDC58-204ENST00000479414 DUXBA0A1W2PPF3 345 aa0.65□□□□□ -2.31
CCDC58-204ENST00000479414 ODAMA1E959 279 aa0.65□□□□□ -2.31
CCDC58-204ENST00000479414 NDUFC2O95298 119 aa0.65□□□□□ -2.31
CCDC58-204ENST00000479414 MSMO1Q15800 293 aa0.65□□□□□ -2.31
CCDC58-204ENST00000479414 TEN1Q86WV5 123 aa0.65□□□□□ -2.31
CCDC58-204ENST00000479414 MUCL1Q96DR8 90 aa0.65□□□□□ -2.31
CCDC58-204ENST00000479414 PBOV1Q9GZY1 135 aa0.65□□□□□ -2.31
CCDC58-204ENST00000479414 TMEM138Q9NPI0 162 aa0.65□□□□□ -2.31
CCDC58-204ENST00000479414 PCLOQ9Y6V0 5065 aa0.64□□□□□ -2.31
CCDC58-204ENST00000479414 UBR4Q5T4S7 5183 aa0.64□□□□□ -2.31
CCDC58-204ENST00000479414 COL24A1Q17RW2 1714 aa0.64□□□□□ -2.31
CCDC58-204ENST00000479414 MYH2Q9UKX2 1941 aa0.64□□□□□ -2.31
CCDC58-204ENST00000479414 C17orf112F2Z3M2 114 aa0.64□□□□□ -2.31
CCDC58-204ENST00000479414 PIAS1O75925 651 aa0.64□□□□□ -2.31
CCDC58-204ENST00000479414 OR10J4P0C629 311 aa0.64□□□□□ -2.31
CCDC58-204ENST00000479414 TMED2Q15363 201 aa0.64□□□□□ -2.31
CCDC58-204ENST00000479414 SNCBQ16143 134 aa0.64□□□□□ -2.31
CCDC58-204ENST00000479414 LYSMD1Q96S90 227 aa0.64□□□□□ -2.31
CCDC58-204ENST00000479414 GPX7Q96SL4 187 aaPredicted RBP0.64□□□□□ -2.31
CCDC58-204ENST00000479414 WFDC10AQ9H1F0 79 aa0.64□□□□□ -2.31
CCDC58-204ENST00000479414 ZDBF2Q9HCK1 2354 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms