RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 TREM1Q9NP99 234 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 RPH3ALQ9UNE2 315 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 PAM16Q9Y3D7 125 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 TRAV30A0A087WSZ9 112 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 TRAV14DV4A0A0A6YYC5 116 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 A0A1B0GU03 582 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 RBMY1BA6NDE4 496 aaKnown RBP4.67□□□□□ -1.66
HOXB3-209ENST00000478644 RBMY1EA6NEQ0 496 aaKnown RBP4.67□□□□□ -1.66
HOXB3-209ENST00000478644 PLA2G10O15496 165 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 SFT2D2O95562 160 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 IGHV3-23P01764 117 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 CTSGP08311 255 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 RBMY1DP0C7P1 496 aaKnown RBP4.67□□□□□ -1.66
HOXB3-209ENST00000478644 SULT1A3P0DMM9 295 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 SULT1A4P0DMN0 295 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 SLC25A6P12236 298 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 GPR183P32249 361 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 BTCP35070 178 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 SNCAP37840 140 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 HTR2BP41595 481 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 EIF2B2P49770 351 aaKnown RBP4.67□□□□□ -1.66
HOXB3-209ENST00000478644 RAB11AP62491 216 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 PPP1R1AQ13522 171 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 C6orf226Q5I0X4 101 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 RNASEKQ6P5S7 137 aaKnown RBP4.67□□□□□ -1.66
HOXB3-209ENST00000478644 LYZL2Q7Z4W2 148 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 TMED4Q7Z7H5 227 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 SLC35G3Q8N808 338 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 DUSP18Q8NEJ0 188 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 RNASE11Q8TAA1 199 aaKnown RBP4.67□□□□□ -1.66
HOXB3-209ENST00000478644 TMEM37Q8WXS4 190 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 NARS2Q96I59 477 aaKnown RBP4.67□□□□□ -1.66
HOXB3-209ENST00000478644 OR10C1Q96KK4 312 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 ENY2Q9NPA8 101 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 PTTG2Q9NZH5 202 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 CACNG5Q9UF02 275 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 MLXQ9UH92 298 aa4.67□□□□□ -1.66
HOXB3-209ENST00000478644 LYSTQ99698 3801 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 C9orf170A2RU37 121 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 OR2T8A6NH00 312 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 LYRM1O43325 122 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 PITX3O75364 302 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 MT-CO2P00403 227 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 RNASE2P10153 161 aaKnown RBP4.66□□□□□ -1.66
HOXB3-209ENST00000478644 HOXA1P49639 335 aaPredicted RBP4.66□□□□□ -1.66
HOXB3-209ENST00000478644 BCAP31P51572 246 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 AP2S1P53680 142 aaPredicted RBP4.66□□□□□ -1.66
HOXB3-209ENST00000478644 SMCO1Q147U7 214 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 C2orf83Q53S99 150 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 Q56UQ5 140 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 SPINK9Q5DT21 86 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 ZNF479Q96JC4 524 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 OVOL2Q9BRP0 275 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 CSTL1Q9H114 145 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 AAMDCQ9H7C9 122 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 SMPXQ9UHP9 88 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 FLVCR2Q9UPI3 526 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 S4R3C0 116 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 U3KQ87 197 aa4.66□□□□□ -1.66
HOXB3-209ENST00000478644 CSMD3Q7Z407 3707 aa4.65□□□□□ -1.66
HOXB3-209ENST00000478644 IGHV3-21A0A0B4J1V1 117 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 IGHV7-4-1A0A0J9YVY3 117 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 A0A1W2PPV4 95 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 RPS10-NUDT3A0A1W2PQS6 291 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 CEBPZOSA8MTT3 80 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 MPTX1A8MV57 137 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 C11orf94C9JXX5 98 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 H3BTX0 84 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 GNG7O60262 68 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 IFNA4P05014 189 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 OR4E1P0C645 316 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 SLAQ13239 276 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 ASAH1Q13510 395 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 USF2Q15853 346 aaPredicted RBP4.65□□□□□ -1.67
HOXB3-209ENST00000478644 KCNIP4Q6PIL6 250 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 CEMP1Q6PRD7 247 aaPredicted RBP4.65□□□□□ -1.67
HOXB3-209ENST00000478644 UNQ9165/PRO28630Q6UXU0 137 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 LYG2Q86SG7 212 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 OR11H4Q8NGC9 324 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 OR4X1Q8NH49 305 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 RNASEH2CQ8TDP1 164 aaKnown RBP4.65□□□□□ -1.67
HOXB3-209ENST00000478644 ZNF414Q96IQ9 312 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 MAP6D1Q9H9H5 199 aa4.65□□□□□ -1.67
HOXB3-209ENST00000478644 TRAV6A0A075B6T7 132 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 DNASE2O00115 360 aaPredicted RBP4.64□□□□□ -1.67
HOXB3-209ENST00000478644 YIF1AO95070 293 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 TMEM50AO95807 157 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 MBP02144 154 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 TCRBP04435 133 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 SLC25A4P12235 298 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 NPPCP23582 126 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 S100A7P31151 101 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 NUTF2P61970 127 aaKnown RBP4.64□□□□□ -1.67
HOXB3-209ENST00000478644 DHRS2Q13268 280 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 ZNF846Q147U1 533 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 FAM122CQ6P4D5 195 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 MORN3Q6PF18 240 aaPredicted RBP4.64□□□□□ -1.67
HOXB3-209ENST00000478644 ZNF600Q6ZNG1 722 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 UBAC2Q8NBM4 344 aa4.64□□□□□ -1.67
HOXB3-209ENST00000478644 OR1S1Q8NH92 325 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms