RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 TMEM75Q8N9X5 138 aa9.75□□□□□ -0.85
TRAF3IP3-213ENST00000478359 GPR61Q9BZJ8 451 aa9.75□□□□□ -0.85
TRAF3IP3-213ENST00000478359 NAT8BQ9UHF3 227 aa9.75□□□□□ -0.85
TRAF3IP3-213ENST00000478359 ZFP30Q9Y2G7 519 aa9.75□□□□□ -0.85
TRAF3IP3-213ENST00000478359 KMT2BQ9UMN6 2715 aaPredicted RBP9.75□□□□□ -0.85
TRAF3IP3-213ENST00000478359 FAM223BA6NKX1 122 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 HLA-DQA1P01909 254 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 DNLZQ5SXM8 178 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 SIGLEC15Q6ZMC9 328 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 FAM223AQ8IWN6 122 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 NUDT10Q8NFP7 164 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 MBD6Q96DN6 1003 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 NUDT11Q96G61 164 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 ZNF414Q96IQ9 312 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 RPH3ALQ9UNE2 315 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 DOPEY1Q5JWR5 2465 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 FAM231BA6NCW3 169 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 IFITM10A6NMD0 228 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 H3BUA1 57 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 J3QLI3 93 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 CSN1S1P47710 185 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 RELQ04864 619 aaPredicted RBP9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 ATP5L2Q7Z4Y8 100 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 NHLRC2Q8NBF2 726 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 PIFOQ8TCI5 191 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 WIPF2Q8TF74 440 aaPredicted RBP9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 TSKUQ8WUA8 353 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 DAZAP1Q96EP5 407 aaKnown RBP9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 S4R3C0 116 aa9.74□□□□□ -0.85
TRAF3IP3-213ENST00000478359 TRAV41A0A0B4J266 112 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 A8MWL6 223 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 SNURFLB1AK76 121 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 AMY1AP04745 511 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 IGF1P05019 195 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 SNRPCP09234 159 aaKnown RBP9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 BRD3OSQ6XYD6 125 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 Q86TA4 180 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 LINC01356Q8N9X3 169 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 OR4B1Q8NGF8 309 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 TMEM18Q96B42 140 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 GFRA4Q9GZZ7 299 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 MRPL18Q9H0U6 180 aaKnown RBP9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 ZNF331Q9NQX6 463 aaPredicted RBP9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 HIF1ANQ9NWT6 349 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 SOX21Q9Y651 276 aaPredicted RBP9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 WNK2Q9Y3S1 2297 aa9.73□□□□□ -0.85
TRAF3IP3-213ENST00000478359 P01737 135 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 FABP4P15090 132 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 ADMP35318 185 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 IER3P46695 156 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 PRR27Q6MZM9 219 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 OR10D4PQ8NGN7 298 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 PACRGQ96M98 296 aaPredicted RBP9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 HIST1H2BLQ99880 126 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 PRSS22Q9GZN4 317 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 RPP21Q9H633 154 aaKnown RBP9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 H3BTX0 84 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 CLEC3BP05452 202 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 IGHV4-38-2P0DP08 117 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 CBLN1P23435 193 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 GPR183P32249 361 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 ATP5G2Q06055 141 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 C19orf54Q5BKX5 351 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 GFI1BQ5VTD9 330 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 GOLT1AQ6ZVE7 132 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 EXOC3-AS1Q8N2X6 119 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 NIT2Q9NQR4 276 aa9.72□□□□□ -0.85
TRAF3IP3-213ENST00000478359 TACC2O95359 2948 aa9.71□□□□□ -0.85
TRAF3IP3-213ENST00000478359 IGHV3OR16-10A0A075B7F0 116 aa9.71□□□□□ -0.85
TRAF3IP3-213ENST00000478359 C19orf71A6NCJ1 209 aa9.71□□□□□ -0.85
TRAF3IP3-213ENST00000478359 A6NDX4 124 aa9.71□□□□□ -0.85
TRAF3IP3-213ENST00000478359 IGHG2P01859 326 aa9.71□□□□□ -0.85
TRAF3IP3-213ENST00000478359 PSG3Q16557 428 aa9.71□□□□□ -0.85
TRAF3IP3-213ENST00000478359 PDZD11Q5EBL8 140 aa9.71□□□□□ -0.85
TRAF3IP3-213ENST00000478359 C1orf194Q5T5A4 169 aa9.71□□□□□ -0.85
TRAF3IP3-213ENST00000478359 ZFYVE26Q68DK2 2539 aa9.71□□□□□ -0.85
TRAF3IP3-213ENST00000478359 TMEM219Q86XT9 240 aa9.71□□□□□ -0.85
TRAF3IP3-213ENST00000478359 ZNF580Q9UK33 172 aa9.71□□□□□ -0.85
TRAF3IP3-213ENST00000478359 DIRC3C9JPN6 131 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 G3V318 75 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 IGHV3-23P01764 117 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 CRISP2P16562 243 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 LRRC75A-AS1Q8N1F1 130 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 USMG5Q96IX5 58 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 BEX4Q9NWD9 120 aaPredicted RBP9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 A0A087X0K7 114 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 NPIPB6E9PJ23 425 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 H3BUX3 64 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 IGLV2-11P01706 119 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 COL8A1P27658 744 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 LOXL1Q08397 574 aaPredicted RBP9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 Q0VG73 95 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 TOMM20LQ6UXN7 152 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 TMEM136Q6ZRR5 245 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 NUP35Q8NFH5 326 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 CCDC140Q96MF4 163 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 ZFAND3Q9H8U3 227 aa9.7□□□□□ -0.86
TRAF3IP3-213ENST00000478359 HIGD1CA8MV81 97 aa9.69□□□□□ -0.86
TRAF3IP3-213ENST00000478359 TCL1AP56279 114 aa9.69□□□□□ -0.86
TRAF3IP3-213ENST00000478359 PYY3Q5JQD4 70 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms