RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 OR2T29Q8NH02 315 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 TMEM167AQ8TBQ9 72 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 DCANP1Q8TF63 244 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 Q96MT0 163 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 TBX5Q99593 518 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 SELENOIQ9C0D9 397 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 NXF2Q9GZY0 626 aaKnown RBP2.75□□□□□ -1.97
VPS50-214ENST00000477935 SAR1AQ9NR31 198 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 SDHAF2Q9NX18 166 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 PRELID3BQ9Y3B1 194 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 TRAV26-1A0A087WT03 109 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 TRAV5A0A0B4J249 113 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 LRCOL1A6NCL2 159 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 HELTA6NFD8 242 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 PRKYO43930 277 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 ADAP1O75689 374 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 HLA-DRB4P13762 266 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 HLA-GP17693 338 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 EVI2AP22794 236 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 NPPCP23582 126 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 CRHBPP24387 322 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 MAGOHP61326 146 aaKnown RBP2.74□□□□□ -1.97
VPS50-214ENST00000477935 OR5I1Q13606 314 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 TP53I3Q53FA7 332 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 PSMG4Q5JS54 123 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 SPATA31B1PQ5VZV4 182 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 TMEM236Q5W0B7 351 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 TMEM252Q8N6L7 170 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 GDPD1Q8N9F7 314 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 UBAC2Q8NBM4 344 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 OR10J6PQ8NGY7 276 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 DNAJC9Q8WXX5 260 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 RPUSD4Q96CM3 377 aaKnown RBP2.74□□□□□ -1.97
VPS50-214ENST00000477935 TLCD1Q96CP7 247 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 MRPL48Q96GC5 212 aaKnown RBP2.74□□□□□ -1.97
VPS50-214ENST00000477935 NARS2Q96I59 477 aaKnown RBP2.74□□□□□ -1.97
VPS50-214ENST00000477935 TMEM208Q9BTX3 173 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 BABAM2Q9NXR7 383 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 MRPS7Q9Y2R9 242 aaKnown RBP2.74□□□□□ -1.97
VPS50-214ENST00000477935 HLA-DRB4X5D2U9 266 aa2.74□□□□□ -1.97
VPS50-214ENST00000477935 ERICH4A6NGS2 130 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 CRTAPO75718 401 aaPredicted RBP2.73□□□□□ -1.97
VPS50-214ENST00000477935 SLC22A5O76082 557 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 HRASP01112 189 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 SERPINE2P07093 398 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 CELP19835 753 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 CTRLP40313 264 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 CDKN1BP46527 198 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 HLA-DRB3P79483 266 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 DHRS2Q13268 280 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 UNC119Q13432 240 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 YIF1BQ5BJH7 314 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 GLIPR1L1Q6UWM5 242 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 TOMM20LQ6UXN7 152 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 PUSL1Q8N0Z8 303 aaKnown RBP2.73□□□□□ -1.97
VPS50-214ENST00000477935 C1orf158Q8N1D5 194 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 C10orf126Q8N4M7 172 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 ZFP41Q8N8Y5 198 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 OR52I1Q8NGK6 324 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 OR5AK2Q8NH90 309 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 CIRBP-AS1Q8TBR5 109 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 METTL26Q96S19 204 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 FAAP24Q9BTP7 215 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 COMMD5Q9GZQ3 224 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 OR2D2Q9H210 308 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 TAS2R4Q9NYW5 299 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 CKLFQ9UBR5 152 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 RBM7Q9Y580 266 aaKnown RBP2.73□□□□□ -1.97
VPS50-214ENST00000477935 LY96Q9Y6Y9 160 aa2.73□□□□□ -1.97
VPS50-214ENST00000477935 IGLC7A0M8Q6 106 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 DAPL1A0PJW8 107 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 K7EIM0 57 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 CST1P01037 141 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 OR13C7P0DN81 318 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 COX4I1P13073 169 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 SRMP19623 302 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 HTR2CP28335 458 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 P2RY1P47900 373 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 HNRNPA3P51991 378 aaKnown RBP2.72□□□□□ -1.97
VPS50-214ENST00000477935 TAS2R43P59537 309 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 PSG9Q00887 426 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 C15orf54Q8N8G6 183 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 ZNF709Q8N972 641 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 OR4B1Q8NGF8 309 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 OR4A4PQ8NGN8 299 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 OR4S2Q8NH73 311 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 OR10J5Q8NHC4 309 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 ANP32BQ92688 251 aaKnown RBP2.72□□□□□ -1.97
VPS50-214ENST00000477935 SLC25A46Q96AG3 418 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 IGF2BP2-AS1Q96M15 143 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 LINC01600Q96MT4 127 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 HINT2Q9BX68 163 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 BANF2Q9H503 90 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 PLEKHJ1Q9NW61 149 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 BET1LQ9NYM9 111 aa2.72□□□□□ -1.97
VPS50-214ENST00000477935 TIMM8BQ9Y5J9 83 aaPredicted RBP2.72□□□□□ -1.97
VPS50-214ENST00000477935 F11RQ9Y624 299 aaKnown RBP2.72□□□□□ -1.97
VPS50-214ENST00000477935 V9GYY5 206 aaPredicted RBP2.72□□□□□ -1.97
VPS50-214ENST00000477935 IGHV3-66A0A0C4DH42 116 aa2.71□□□□□ -1.98
VPS50-214ENST00000477935 A0A0J9YY99 117 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms