RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 CDC34P49427 236 aaPredicted RBP12.23□□□□□ -0.45
VHL-203ENST00000477538 DEFB114Q30KQ6 69 aa12.23□□□□□ -0.45
VHL-203ENST00000477538 MIR17HGQ75NE6 70 aa12.23□□□□□ -0.45
VHL-203ENST00000477538 RPP25LQ8N5L8 163 aaKnown RBP12.23□□□□□ -0.45
VHL-203ENST00000477538 PHYHIPLQ96FC7 376 aa12.23□□□□□ -0.45
VHL-203ENST00000477538 PKD1L1Q8TDX9 2849 aa12.23□□□□□ -0.45
VHL-203ENST00000477538 TRAV5A0A0B4J249 113 aa12.22□□□□□ -0.45
VHL-203ENST00000477538 IGLV1-51P01701 117 aa12.22□□□□□ -0.45
VHL-203ENST00000477538 ALKAL2Q6UX46 152 aa12.22□□□□□ -0.45
VHL-203ENST00000477538 TCF24Q7RTU0 167 aa12.22□□□□□ -0.45
VHL-203ENST00000477538 GPR82Q96P67 336 aa12.22□□□□□ -0.45
VHL-203ENST00000477538 GPR61Q9BZJ8 451 aa12.22□□□□□ -0.45
VHL-203ENST00000477538 ACTR3CQ9C0K3 210 aaPredicted RBP12.22□□□□□ -0.45
VHL-203ENST00000477538 HELTA6NFD8 242 aa12.21□□□□□ -0.45
VHL-203ENST00000477538 CD5P06127 495 aa12.21□□□□□ -0.45
VHL-203ENST00000477538 RPL7P18124 248 aaKnown RBP12.21□□□□□ -0.45
VHL-203ENST00000477538 TAS2R45P59539 299 aa12.21□□□□□ -0.45
VHL-203ENST00000477538 CD300EQ496F6 205 aaPredicted RBP12.21□□□□□ -0.45
VHL-203ENST00000477538 FAM90A2PQ658T7 463 aa12.21□□□□□ -0.45
VHL-203ENST00000477538 SIGLEC15Q6ZMC9 328 aa12.21□□□□□ -0.45
VHL-203ENST00000477538 BPIFA4PQ86YQ2 179 aa12.21□□□□□ -0.45
VHL-203ENST00000477538 OR2K2Q8NGT1 345 aa12.21□□□□□ -0.45
VHL-203ENST00000477538 RAB24Q969Q5 203 aa12.21□□□□□ -0.45
VHL-203ENST00000477538 SLC25A2Q9BXI2 301 aa12.21□□□□□ -0.45
VHL-203ENST00000477538 CTXND1A0A1B0GTU2 59 aa12.2□□□□□ -0.46
VHL-203ENST00000477538 HMGB3O15347 200 aaKnown RBP12.2□□□□□ -0.46
VHL-203ENST00000477538 EIF3GO75821 320 aaKnown RBP eCLIP12.2□□□□□ -0.46
VHL-203ENST00000477538 GALR1P47211 349 aa12.2□□□□□ -0.46
VHL-203ENST00000477538 SULT1A2P50226 295 aa12.2□□□□□ -0.46
VHL-203ENST00000477538 RAB5CP51148 216 aa12.2□□□□□ -0.46
VHL-203ENST00000477538 RPL11P62913 178 aaKnown RBP12.2□□□□□ -0.46
VHL-203ENST00000477538 KHDC3LQ587J8 217 aa12.2□□□□□ -0.46
VHL-203ENST00000477538 FAM74A1Q5RGS3 127 aa12.2□□□□□ -0.46
VHL-203ENST00000477538 RBPMS2Q6ZRY4 209 aaKnown RBP12.2□□□□□ -0.46
VHL-203ENST00000477538 TMEM61Q8N0U2 210 aa12.2□□□□□ -0.46
VHL-203ENST00000477538 FAM213BQ8TBF2 198 aa12.2□□□□□ -0.46
VHL-203ENST00000477538 FAM167A-AS1Q96KT0 104 aa12.2□□□□□ -0.46
VHL-203ENST00000477538 IGKV3-7A0A075B6H7 116 aa12.19□□□□□ -0.46
VHL-203ENST00000477538 TRAV25A0A0B4J276 109 aa12.19□□□□□ -0.46
VHL-203ENST00000477538 WIPF1O43516 503 aa12.19□□□□□ -0.46
VHL-203ENST00000477538 FHITP49789 147 aa12.19□□□□□ -0.46
VHL-203ENST00000477538 ZNF726P1Q15940 193 aa12.19□□□□□ -0.46
VHL-203ENST00000477538 DPPA3Q6W0C5 159 aa12.19□□□□□ -0.46
VHL-203ENST00000477538 SSX7Q7RTT5 188 aa12.19□□□□□ -0.46
VHL-203ENST00000477538 IZUMO1RA6ND01 250 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 TSPAN4O14817 238 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
VHL-203ENST00000477538 OR7C2O60412 319 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 STAG3L2P0CL84 134 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 STAG3L3P0CL85 134 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 PYYP10082 97 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 GP9P14770 177 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 ATF4P18848 351 aaPredicted RBP12.18□□□□□ -0.46
VHL-203ENST00000477538 OXLD1Q5BKU9 147 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 LCN12Q6JVE5 192 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 TEX261Q6UWH6 196 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 STXBP6Q8NFX7 210 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 PAXXQ9BUH6 204 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 TMEM14CQ9P0S9 112 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 SMAD5-AS1Q9Y6J3 95 aa12.18□□□□□ -0.46
VHL-203ENST00000477538 ZNF785A8K8V0 405 aa12.17□□□□□ -0.46
VHL-203ENST00000477538 ARL14EPLP0DKL9 152 aa12.17□□□□□ -0.46
VHL-203ENST00000477538 PQLC2Q6ZP29 291 aa12.17□□□□□ -0.46
VHL-203ENST00000477538 GBGT1Q8N5D6 347 aa12.17□□□□□ -0.46
VHL-203ENST00000477538 ZNF503Q96F45 646 aa12.17□□□□□ -0.46
VHL-203ENST00000477538 OR51M1Q9H341 326 aa12.17□□□□□ -0.46
VHL-203ENST00000477538 NRN1Q9NPD7 142 aa12.17□□□□□ -0.46
VHL-203ENST00000477538 A0A087X0K7 114 aa12.16□□□□□ -0.46
VHL-203ENST00000477538 MAP1LC3B2A6NCE7 125 aa12.16□□□□□ -0.46
VHL-203ENST00000477538 IGLC2P0DOY2 106 aa12.16□□□□□ -0.46
VHL-203ENST00000477538 PAFAH1B2P68402 229 aa12.16□□□□□ -0.46
VHL-203ENST00000477538 GUCA2BQ16661 112 aa12.16□□□□□ -0.46
VHL-203ENST00000477538 LCN15Q6UWW0 184 aa12.16□□□□□ -0.46
VHL-203ENST00000477538 ZNF680Q8NEM1 530 aa12.16□□□□□ -0.46
VHL-203ENST00000477538 RNF141Q8WVD5 230 aa12.16□□□□□ -0.46
VHL-203ENST00000477538 SPAG8Q99932 426 aaPredicted RBP12.16□□□□□ -0.46
VHL-203ENST00000477538 MAP1LC3BQ9GZQ8 125 aa12.16□□□□□ -0.46
VHL-203ENST00000477538 MS4A6AQ9H2W1 248 aa12.16□□□□□ -0.46
VHL-203ENST00000477538 ZNF705EA8MWA4 302 aaPredicted RBP12.15□□□□□ -0.46
VHL-203ENST00000477538 DNASE2O00115 360 aaPredicted RBP12.15□□□□□ -0.46
VHL-203ENST00000477538 CXorf1O96002 111 aa12.15□□□□□ -0.46
VHL-203ENST00000477538 IFNA7P01567 189 aa12.15□□□□□ -0.46
VHL-203ENST00000477538 SNRPCP09234 159 aaKnown RBP12.15□□□□□ -0.46
VHL-203ENST00000477538 OR10J4P0C629 311 aa12.15□□□□□ -0.46
VHL-203ENST00000477538 HIST1H1EP10412 219 aaKnown RBP12.15□□□□□ -0.46
VHL-203ENST00000477538 TFPI2P48307 235 aa12.15□□□□□ -0.46
VHL-203ENST00000477538 MEOX2P50222 304 aa12.15□□□□□ -0.46
VHL-203ENST00000477538 FGF8P55075 233 aaPredicted RBP12.15□□□□□ -0.46
VHL-203ENST00000477538 UBE2L3P68036 154 aaKnown RBP12.15□□□□□ -0.46
VHL-203ENST00000477538 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.15□□□□□ -0.46
VHL-203ENST00000477538 WFDC3Q8IUB2 231 aa12.15□□□□□ -0.46
VHL-203ENST00000477538 FXYD5Q96DB9 178 aa12.15□□□□□ -0.46
VHL-203ENST00000477538 C17orf77Q96MU5 243 aa12.15□□□□□ -0.46
VHL-203ENST00000477538 HRH4Q9H3N8 390 aa12.15□□□□□ -0.46
VHL-203ENST00000477538 AGRNO00468 2067 aa12.14□□□□□ -0.47
VHL-203ENST00000477538 G3V4G9 280 aa12.14□□□□□ -0.47
VHL-203ENST00000477538 H3BQ15 152 aa12.14□□□□□ -0.47
VHL-203ENST00000477538 H2AFB1P0C5Y9 115 aa12.14□□□□□ -0.47
VHL-203ENST00000477538 GCHFRP30047 84 aa12.14□□□□□ -0.47
VHL-203ENST00000477538 GUK1Q16774 197 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms