RNA–Protein interactions for RNA: ENST00000477369.5

AFF4-207, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 5

Gene AFF4, Length 728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-207ENST00000477369 Q96M85 177 aa2.14□□□□□ -2.07
AFF4-207ENST00000477369 LRTM1Q9HBL6 345 aa2.14□□□□□ -2.07
AFF4-207ENST00000477369 C19orf12Q9NSK7 152 aa2.14□□□□□ -2.07
AFF4-207ENST00000477369 RP1L1Q8IWN7 2480 aaPredicted RBP2.14□□□□□ -2.07
AFF4-207ENST00000477369 FREM1Q5H8C1 2179 aa2.13□□□□□ -2.07
AFF4-207ENST00000477369 ODAMA1E959 279 aa2.13□□□□□ -2.07
AFF4-207ENST00000477369 C2orf70A6NJV1 201 aa2.13□□□□□ -2.07
AFF4-207ENST00000477369 ARL14EPLP0DKL9 152 aa2.13□□□□□ -2.07
AFF4-207ENST00000477369 ARPP19P56211 112 aa2.13□□□□□ -2.07
AFF4-207ENST00000477369 SURF2Q15527 256 aaPredicted RBP2.13□□□□□ -2.07
AFF4-207ENST00000477369 Q6ZSA8 131 aa2.13□□□□□ -2.07
AFF4-207ENST00000477369 LINC00311Q8N616 119 aa2.13□□□□□ -2.07
AFF4-207ENST00000477369 SKA2Q8WVK7 121 aaPredicted RBP2.13□□□□□ -2.07
AFF4-207ENST00000477369 ISOC1Q96CN7 298 aa2.13□□□□□ -2.07
AFF4-207ENST00000477369 BORCS8Q96FH0 119 aa2.13□□□□□ -2.07
AFF4-207ENST00000477369 NISCHQ9Y2I1 1504 aa2.12□□□□□ -2.07
AFF4-207ENST00000477369 BAZ2BQ9UIF8 2168 aaKnown RBP2.12□□□□□ -2.07
AFF4-207ENST00000477369 ANKRD31Q8N7Z5 1873 aa2.12□□□□□ -2.07
AFF4-207ENST00000477369 NUP210Q8TEM1 1887 aaPredicted RBP2.12□□□□□ -2.07
AFF4-207ENST00000477369 H7BYZ3 331 aa2.12□□□□□ -2.07
AFF4-207ENST00000477369 OR1I1O60431 355 aa2.12□□□□□ -2.07
AFF4-207ENST00000477369 LYZL6O75951 148 aa2.12□□□□□ -2.07
AFF4-207ENST00000477369 FAM107AO95990 144 aa2.12□□□□□ -2.07
AFF4-207ENST00000477369 TMBIM6P55061 237 aa2.12□□□□□ -2.07
AFF4-207ENST00000477369 PDE6HQ13956 83 aa2.12□□□□□ -2.07
AFF4-207ENST00000477369 PHF5AQ7RTV0 110 aaKnown RBP2.12□□□□□ -2.07
AFF4-207ENST00000477369 OR2H1Q9GZK4 316 aa2.12□□□□□ -2.07
AFF4-207ENST00000477369 GINS2Q9Y248 185 aa2.12□□□□□ -2.07
AFF4-207ENST00000477369 LAMTOR2Q9Y2Q5 125 aa2.12□□□□□ -2.07
AFF4-207ENST00000477369 HSPB11Q9Y547 144 aa2.12□□□□□ -2.07
AFF4-207ENST00000477369 HEATR5BQ9P2D3 2071 aa2.11□□□□□ -2.07
AFF4-207ENST00000477369 TRAPPC8Q9Y2L5 1435 aa2.11□□□□□ -2.07
AFF4-207ENST00000477369 TRAV12-1A0A0B4J245 112 aa2.11□□□□□ -2.07
AFF4-207ENST00000477369 HIST1H2BKO60814 126 aa2.11□□□□□ -2.07
AFF4-207ENST00000477369 HIST1H2BJP06899 126 aa2.11□□□□□ -2.07
AFF4-207ENST00000477369 BCL2P10415 239 aa2.11□□□□□ -2.07
AFF4-207ENST00000477369 MSMO1Q15800 293 aa2.11□□□□□ -2.07
AFF4-207ENST00000477369 C6orf62Q9GZU0 229 aaPredicted RBP2.11□□□□□ -2.07
AFF4-207ENST00000477369 OTORQ9NRC9 128 aa2.11□□□□□ -2.07
AFF4-207ENST00000477369 OR5AC2Q9NZP5 309 aa2.11□□□□□ -2.07
AFF4-207ENST00000477369 RNF11Q9Y3C5 154 aa2.11□□□□□ -2.07
AFF4-207ENST00000477369 ASB4Q9Y574 426 aa2.11□□□□□ -2.07
AFF4-207ENST00000477369 SOX21Q9Y651 276 aaPredicted RBP2.11□□□□□ -2.07
AFF4-207ENST00000477369 MED12LQ86YW9 2145 aa2.11□□□□□ -2.07
AFF4-207ENST00000477369 CST7O76096 145 aa2.1□□□□□ -2.07
AFF4-207ENST00000477369 IFNA4P05014 189 aa2.1□□□□□ -2.07
AFF4-207ENST00000477369 POLR2HP52434 150 aaKnown RBP2.1□□□□□ -2.07
AFF4-207ENST00000477369 ROMO1P60602 79 aa2.1□□□□□ -2.07
AFF4-207ENST00000477369 HBBP68871 147 aa2.1□□□□□ -2.07
AFF4-207ENST00000477369 C10orf55Q5SWW7 151 aa2.1□□□□□ -2.07
AFF4-207ENST00000477369 OR9Q1Q8NGQ5 310 aa2.1□□□□□ -2.07
AFF4-207ENST00000477369 ARHGEF11O15085 1522 aa2.09□□□□□ -2.07
AFF4-207ENST00000477369 TRAV14DV4A0A0A6YYC5 116 aa2.09□□□□□ -2.07
AFF4-207ENST00000477369 GABARAPH6UMI1 98 aa2.09□□□□□ -2.07
AFF4-207ENST00000477369 K7ERJ3 54 aa2.09□□□□□ -2.07
AFF4-207ENST00000477369 MRPS14O60783 128 aaKnown RBP2.09□□□□□ -2.07
AFF4-207ENST00000477369 ANGP03950 147 aaKnown RBP2.09□□□□□ -2.07
AFF4-207ENST00000477369 BRS3P32247 399 aa2.09□□□□□ -2.07
AFF4-207ENST00000477369 RPL35P42766 123 aaKnown RBP2.09□□□□□ -2.07
AFF4-207ENST00000477369 ALX1Q15699 326 aa2.09□□□□□ -2.07
AFF4-207ENST00000477369 DEFB113Q30KQ7 82 aa2.09□□□□□ -2.07
AFF4-207ENST00000477369 ST6GALNAC3Q8NDV1 305 aa2.09□□□□□ -2.07
AFF4-207ENST00000477369 ZNF714Q96N38 554 aa2.09□□□□□ -2.07
AFF4-207ENST00000477369 CCDC115Q96NT0 180 aa2.09□□□□□ -2.07
AFF4-207ENST00000477369 RETNLBQ9BQ08 111 aa2.09□□□□□ -2.07
AFF4-207ENST00000477369 MED31Q9Y3C7 131 aa2.09□□□□□ -2.07
AFF4-207ENST00000477369 FRMPD1Q5SYB0 1578 aa2.09□□□□□ -2.08
AFF4-207ENST00000477369 MYO5AQ9Y4I1 1855 aaKnown RBP2.09□□□□□ -2.08
AFF4-207ENST00000477369 ARAP1Q96P48 1450 aa2.08□□□□□ -2.08
AFF4-207ENST00000477369 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
AFF4-207ENST00000477369 RNASE3P12724 160 aaKnown RBP2.08□□□□□ -2.08
AFF4-207ENST00000477369 S100A11P31949 105 aa2.08□□□□□ -2.08
AFF4-207ENST00000477369 EIF3IQ13347 325 aaKnown RBP2.08□□□□□ -2.08
AFF4-207ENST00000477369 UNQ6190/PRO20217Q6UXQ8 127 aa2.08□□□□□ -2.08
AFF4-207ENST00000477369 OR5D16Q8NGK9 328 aa2.08□□□□□ -2.08
AFF4-207ENST00000477369 SFT2D1Q8WV19 159 aa2.08□□□□□ -2.08
AFF4-207ENST00000477369 CACYBPQ9HB71 228 aaKnown RBP2.08□□□□□ -2.08
AFF4-207ENST00000477369 MED9Q9NWA0 146 aa2.08□□□□□ -2.08
AFF4-207ENST00000477369 NAT8BQ9UHF3 227 aa2.08□□□□□ -2.08
AFF4-207ENST00000477369 LY96Q9Y6Y9 160 aa2.08□□□□□ -2.08
AFF4-207ENST00000477369 BCL9O00512 1426 aa2.08□□□□□ -2.08
AFF4-207ENST00000477369 MYLKQ15746 1914 aa2.07□□□□□ -2.08
AFF4-207ENST00000477369 DHFRP00374 187 aa2.07□□□□□ -2.08
AFF4-207ENST00000477369 RPL7P18124 248 aaKnown RBP2.07□□□□□ -2.08
AFF4-207ENST00000477369 KLRD1Q13241 179 aa2.07□□□□□ -2.08
AFF4-207ENST00000477369 Q8N2B8 174 aa2.07□□□□□ -2.08
AFF4-207ENST00000477369 MED13Q9UHV7 2174 aa2.06□□□□□ -2.08
AFF4-207ENST00000477369 XIRP1Q702N8 1843 aaKnown RBP2.06□□□□□ -2.08
AFF4-207ENST00000477369 LOC105371267A0A1B0GV96 52 aa2.06□□□□□ -2.08
AFF4-207ENST00000477369 C17orf112F2Z3M2 114 aa2.06□□□□□ -2.08
AFF4-207ENST00000477369 RER1O15258 196 aa2.06□□□□□ -2.08
AFF4-207ENST00000477369 OR10J4P0C629 311 aa2.06□□□□□ -2.08
AFF4-207ENST00000477369 RPS3P23396 243 aaKnown RBP eCLIP2.06□□□□□ -2.08
AFF4-207ENST00000477369 RAB4BP61018 213 aa2.06□□□□□ -2.08
AFF4-207ENST00000477369 HRCT1Q6UXD1 115 aa2.06□□□□□ -2.08
AFF4-207ENST00000477369 C12orf29Q8N999 325 aa2.06□□□□□ -2.08
AFF4-207ENST00000477369 OR2T35Q8NGX2 323 aa2.06□□□□□ -2.08
AFF4-207ENST00000477369 OR4K15Q8NH41 348 aa2.06□□□□□ -2.08
AFF4-207ENST00000477369 TMEM254Q8TBM7 123 aa2.06□□□□□ -2.08
AFF4-207ENST00000477369 RTL9Q8NET4 1388 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms