RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 OR10J6PQ8NGY7 276 aa7.8□□□□□ -1.16
BRCA1-213ENST00000476777 MARCH1Q8TCQ1 289 aa7.8□□□□□ -1.16
BRCA1-213ENST00000476777 RNASE8Q8TDE3 154 aaKnown RBP7.8□□□□□ -1.16
BRCA1-213ENST00000476777 TRGV9Q99603 122 aa7.8□□□□□ -1.16
BRCA1-213ENST00000476777 SLC25A39Q9BZJ4 359 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-213ENST00000476777 COMMD3Q9UBI1 195 aa7.8□□□□□ -1.16
BRCA1-213ENST00000476777 IGKV1OR2-108A0A075B7D4 117 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 ZNF98A6NK75 572 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 H3BNG1 76 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 GABARAPH6UMI1 98 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 GABARAPO95166 117 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 TBPP20226 339 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 ICAM4Q14773 271 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 RNASE12Q5GAN4 147 aaKnown RBP7.79□□□□□ -1.16
BRCA1-213ENST00000476777 TMEM268Q5VZI3 342 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 ZNF493Q6ZR52 646 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 SLC35E1Q96K37 410 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 RTBDNQ9BSG5 229 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-213ENST00000476777 NAA60Q9H7X0 242 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 SLC25A22Q9H936 323 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 CACFD1Q9UGQ2 172 aa7.79□□□□□ -1.16
BRCA1-213ENST00000476777 IFNA5P01569 189 aa7.78□□□□□ -1.16
BRCA1-213ENST00000476777 SULT1A3P0DMM9 295 aa7.78□□□□□ -1.16
BRCA1-213ENST00000476777 SULT1A4P0DMN0 295 aa7.78□□□□□ -1.16
BRCA1-213ENST00000476777 ZNF182P17025 639 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-213ENST00000476777 LSM3P62310 102 aaKnown RBP7.78□□□□□ -1.16
BRCA1-213ENST00000476777 SCGB2B2Q4G0G5 96 aa7.78□□□□□ -1.16
BRCA1-213ENST00000476777 OR4D5Q8NGN0 318 aa7.78□□□□□ -1.16
BRCA1-213ENST00000476777 OR1B1Q8NGR6 318 aa7.78□□□□□ -1.16
BRCA1-213ENST00000476777 OR52I2Q8NH67 350 aa7.78□□□□□ -1.16
BRCA1-213ENST00000476777 DTD1Q8TEA8 209 aa7.78□□□□□ -1.16
BRCA1-213ENST00000476777 TMEM263Q8WUH6 116 aaKnown RBP7.78□□□□□ -1.16
BRCA1-213ENST00000476777 HSPB7Q9UBY9 170 aa7.78□□□□□ -1.16
BRCA1-213ENST00000476777 SLC45A2Q9UMX9 530 aa7.78□□□□□ -1.16
BRCA1-213ENST00000476777 TMEM56-RWDD3S4R434 201 aa7.78□□□□□ -1.16
BRCA1-213ENST00000476777 FAM229AH3BQW9 127 aa7.77□□□□□ -1.17
BRCA1-213ENST00000476777 TNFAIP8O95379 198 aa7.77□□□□□ -1.17
BRCA1-213ENST00000476777 DNAH10OSP0CZ25 163 aa7.77□□□□□ -1.17
BRCA1-213ENST00000476777 ATP5IP56385 69 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-213ENST00000476777 HIST1H1AQ02539 215 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-213ENST00000476777 Q6ZSN1 163 aa7.77□□□□□ -1.17
BRCA1-213ENST00000476777 THAP8Q8NA92 274 aa7.77□□□□□ -1.17
BRCA1-213ENST00000476777 ZNF738Q8NE65 137 aa7.77□□□□□ -1.17
BRCA1-213ENST00000476777 RBKSQ9H477 322 aa7.77□□□□□ -1.17
BRCA1-213ENST00000476777 MTFP1Q9UDX5 166 aa7.77□□□□□ -1.17
BRCA1-213ENST00000476777 TNFRSF18Q9Y5U5 241 aa7.77□□□□□ -1.17
BRCA1-213ENST00000476777 A0A087WTM6 91 aa7.76□□□□□ -1.17
BRCA1-213ENST00000476777 A0A096LPF7 62 aa7.76□□□□□ -1.17
BRCA1-213ENST00000476777 SIVA1O15304 175 aa7.76□□□□□ -1.17
BRCA1-213ENST00000476777 HPGDSO60760 199 aa7.76□□□□□ -1.17
BRCA1-213ENST00000476777 ADAP1O75689 374 aa7.76□□□□□ -1.17
BRCA1-213ENST00000476777 CFDP00746 253 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-213ENST00000476777 RHOBP62745 196 aa7.76□□□□□ -1.17
BRCA1-213ENST00000476777 FGL1Q08830 312 aa7.76□□□□□ -1.17
BRCA1-213ENST00000476777 GGNBP1Q5YKI7 109 aa7.76□□□□□ -1.17
BRCA1-213ENST00000476777 OR8A1Q8NGG7 326 aa7.76□□□□□ -1.17
BRCA1-213ENST00000476777 VSIG2Q96IQ7 327 aa7.76□□□□□ -1.17
BRCA1-213ENST00000476777 GPR82Q96P67 336 aa7.76□□□□□ -1.17
BRCA1-213ENST00000476777 C14orf166Q9Y224 244 aaKnown RBP7.76□□□□□ -1.17
BRCA1-213ENST00000476777 GAGE12BA1L429 117 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 CRYM-AS1A6NIL9 109 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 H7BYZ3 331 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 GAGE7O76087 117 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 RAB3DO95716 219 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 GAGE12FP0CL80 117 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 GAGE12GP0CL81 117 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 GAGE12IP0CL82 117 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 CDKN1BP46527 198 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 CCR6P51684 374 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 HAMPP81172 84 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 GPR107Q5VW38 600 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 TMEM182Q6ZP80 229 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-213ENST00000476777 TMEM229BQ8NBD8 167 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 IL22RA2Q969J5 263 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 YIPF6Q96EC8 236 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 PPP1R14DQ9NXH3 145 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 PRR13Q9NZ81 148 aa7.75□□□□□ -1.17
BRCA1-213ENST00000476777 LRP1Q07954 4544 aaKnown RBP7.74□□□□□ -1.17
BRCA1-213ENST00000476777 RLN2P04090 185 aa7.74□□□□□ -1.17
BRCA1-213ENST00000476777 PRB4P10163 310 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-213ENST00000476777 ORM2P19652 201 aa7.74□□□□□ -1.17
BRCA1-213ENST00000476777 CXCL3P19876 107 aa7.74□□□□□ -1.17
BRCA1-213ENST00000476777 GCSHP23434 173 aa7.74□□□□□ -1.17
BRCA1-213ENST00000476777 GATA2P23769 480 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-213ENST00000476777 TAS2R19P59542 299 aa7.74□□□□□ -1.17
BRCA1-213ENST00000476777 SMCO1Q147U7 214 aa7.74□□□□□ -1.17
BRCA1-213ENST00000476777 KIR3DS1Q14943 382 aa7.74□□□□□ -1.17
BRCA1-213ENST00000476777 SURF2Q15527 256 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-213ENST00000476777 FAAP20Q6NZ36 180 aa7.74□□□□□ -1.17
BRCA1-213ENST00000476777 STEAP1BQ6NZ63 245 aa7.74□□□□□ -1.17
BRCA1-213ENST00000476777 TMPRSS5Q9H3S3 457 aa7.74□□□□□ -1.17
BRCA1-213ENST00000476777 GPR132Q9UNW8 380 aa7.74□□□□□ -1.17
BRCA1-213ENST00000476777 NXPH4O95158 308 aa7.73□□□□□ -1.17
BRCA1-213ENST00000476777 NFE4Q86UQ8 179 aa7.73□□□□□ -1.17
BRCA1-213ENST00000476777 CCDC28AQ8IWP9 274 aa7.73□□□□□ -1.17
BRCA1-213ENST00000476777 TMEM147Q9BVK8 224 aa7.73□□□□□ -1.17
BRCA1-213ENST00000476777 Q9H521 79 aa7.73□□□□□ -1.17
BRCA1-213ENST00000476777 A0A0B4J2A0 478 aa7.72□□□□□ -1.17
BRCA1-213ENST00000476777 KRTAP29-1A8MX34 341 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-213ENST00000476777 FAM25AB3EWG3 89 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms