RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 SLC25A2Q9BXI2 301 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 TAS2R4Q9NYW5 299 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 GNG12Q9UBI6 72 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 LAMTOR3Q9UHA4 124 aa4.75□□□□□ -1.65
ECHDC1-215ENST00000475319 LAMA3Q16787 3333 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 KIF26AQ9ULI4 1882 aaPredicted RBP4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 BRWD1Q9NSI6 2320 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 TRAV8-1A0A0A6YYK1 113 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 C17orf51A8MQB3 221 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 H7C1H1 209 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 K7ERJ3 54 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 CLDN14O95500 239 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 CRYGSP22914 178 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 FBXW4P57775 412 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 PMAIP1Q13794 54 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 OR1C1Q15619 314 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 WDR38Q5JTN6 314 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 SLC48A1Q6P1K1 146 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 Q6ZQT7 251 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 OR5AS1Q8N127 324 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 C3orf56Q8N813 242 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 COPS9Q8WXC6 57 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 ODF3Q96PU9 254 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 AGPAT4-IT1Q9H0P7 198 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 TAAR2Q9P1P5 351 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 CACNG5Q9UF02 275 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 ZNF256Q9Y2P7 627 aaPredicted RBP4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 TET1Q8NFU7 2136 aa4.74□□□□□ -1.65
ECHDC1-215ENST00000475319 COL4A6Q14031 1691 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 HEATR5AQ86XA9 2040 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 TRAV27A0A087WT01 109 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 C15orf62A8K5M9 175 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 ATOX1O00244 68 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 CDX4O14627 284 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 CHEK1O14757 476 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 IGKCP01834 107 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 PYYP10082 97 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 LOXP28300 417 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 GCHFRP30047 84 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 CD52P31358 61 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 DLX1P56177 255 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 ADIGQ0VDE8 80 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 VMA21Q3ZAQ7 101 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 LINC01590Q5TEZ4 76 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 ZNF493Q6ZR52 646 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 SLC25A45Q8N413 288 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 RAB42Q8N4Z0 105 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 POM121L12Q8N7R1 296 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 PRSS27Q9BQR3 290 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 SLC25A22Q9H936 323 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 KLF13Q9Y2Y9 288 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 DNAH12Q6ZR08 3092 aa4.73□□□□□ -1.65
ECHDC1-215ENST00000475319 SPINT2O43291 252 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 ACYP1P07311 99 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 CXCL5P42830 114 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 UBE2D3P61077 147 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 UBE2D2P62837 147 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 SRYQ05066 204 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 DGAT2L6Q6ZPD8 337 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 SLC25A48Q6ZT89 311 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 ZNF441Q8N8Z8 693 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 WDR31Q8NA23 367 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 RND1Q92730 232 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 URB1-AS1Q96HZ7 61 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 C8orf49Q96NF6 230 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 GPX7Q96SL4 187 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 MGST2Q99735 147 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 SHANK2-AS3Q9BTD1 123 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 ZNF747Q9BV97 191 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 PILRAQ9UKJ1 303 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 EPDR1Q9UM22 224 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 COL4A4P53420 1690 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 CKAP5Q14008 2032 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 PLXNA4Q9HCM2 1894 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 COL4A3Q01955 1670 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 TRBV20OR9-2A0A075B6H5 130 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 TRAV12-2A0A075B6T6 113 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 MYMXA0A1B0GTQ4 84 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 A0A1B0GVT2 93 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 PRR32B1ATL7 298 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 EPM2AB3EWF7 344 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 LMO7DNF2Z398 122 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 TIMM23O14925 209 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 CXCL13O43927 109 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 NPYP01303 97 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 COX6A1P12074 109 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 LOXL1Q08397 574 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 ZNF672Q499Z4 452 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 MFSD12Q6NUT3 480 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 KCTD18Q6PI47 426 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 CD164L2Q6UWJ8 174 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 PDPNQ86YL7 162 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 PFN4Q8NHR9 129 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 TMEM190Q8WZ59 177 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 NABP1Q96AH0 204 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 HDHD3Q9BSH5 251 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 LIME1Q9H400 295 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 OCIAD1Q9NX40 245 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 C11orf21Q9P2W6 132 aa4.72□□□□□ -1.65
ECHDC1-215ENST00000475319 KLK5Q9Y337 293 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms