RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 GTSF1LQ9H1H1 148 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 PARP11Q9NR21 331 aa9□□□□□ -0.97
HLA-DOB-208ENST00000475235 A0A1B0GW64 132 aa8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 A0A1W2PRE2 83 aa8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 MAP1LC3B2A6NCE7 125 aa8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 ATP6V0E1O15342 81 aa8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 PSMB8P28062 276 aa8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 RPL8P62917 257 aaKnown RBP8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 TMEM267Q0VDI3 215 aaPredicted RBP8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 OR5A1Q8NGJ0 315 aa8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 OR1B1Q8NGR6 318 aa8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 VAMP8Q9BV40 100 aa8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 MAP1LC3BQ9GZQ8 125 aa8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 OR2D2Q9H210 308 aa8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 SPANXB1Q9NS25 103 aaPredicted RBP8.99□□□□□ -0.97
HLA-DOB-208ENST00000475235 TRAV41A0A0B4J266 112 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 K7EPK0 472 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 M0R1X1 148 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 PROP1O75360 226 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 NUDT3O95989 172 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 NPY1RP25929 384 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 PPIFP30405 207 aaKnown RBP8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 HNRNPA3P51991 378 aaKnown RBP8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 TAS2R20P59543 309 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 KCNIP4Q6PIL6 250 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 C18orf65Q6ZTR6 163 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 ABHD5Q8WTS1 349 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 FLYWCH2Q96CP2 140 aaKnown RBP8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 DERL1Q9BUN8 251 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 FBXL15Q9H469 300 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 FOXA2Q9Y261 457 aaPredicted RBP8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 WSB1Q9Y6I7 421 aa8.98□□□□□ -0.97
HLA-DOB-208ENST00000475235 NOTCH1P46531 2555 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 TRBV24-1A0A075B6N3 115 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 FXYD6-FXYD2A0A087WZ82 144 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 GAGE10A6NGK3 116 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 G3V318 75 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 CCL24O00175 119 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 IGLV1-40P01703 118 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 SULT1A2P50226 295 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 CRIP2P52943 208 aaPredicted RBP8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 CX3CL1P78423 397 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 ELOBQ15370 118 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 OR1L4Q8NGR5 311 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 MYOZ3Q8TDC0 251 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 C4orf3Q8WVX3 66 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 UBE2E2Q96LR5 201 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 MS4A10Q96PG2 267 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 UHRF2Q96PU4 802 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 FXYD6Q9H0Q3 95 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 PPDPFQ9H3Y8 114 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 V9GYY9 64 aa8.97□□□□□ -0.97
HLA-DOB-208ENST00000475235 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 PRB2P02812 416 aaPredicted RBP8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 IGKV1-16P04430 117 aa8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 RPS28P62857 69 aaKnown RBP8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 MEF2BQ02080 365 aaPredicted RBP8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 AKR1C1Q04828 323 aa8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 MRPL23Q16540 153 aaKnown RBP8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 ECSCRQ19T08 205 aa8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 ZNF260Q3ZCT1 412 aa8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 LYPD6BQ8NI32 183 aa8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 FRZBQ92765 325 aa8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 ADTRPQ96IZ2 230 aa8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 FUT9Q9Y231 359 aa8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 VSIG4Q9Y279 399 aa8.96□□□□□ -0.97
HLA-DOB-208ENST00000475235 A0A0U1RRA0 63 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 A0A1B0GX51 115 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 GAGE12JA6NER3 117 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 CTDSPLO15194 276 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 HMGB3O15347 200 aaKnown RBP8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 XRCC3O43542 346 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 GSTZ1O43708 216 aaPredicted RBP8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 GAGE7O76087 117 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 TRGC2P03986 189 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 GAGE12FP0CL80 117 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 GAGE12GP0CL81 117 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 GAGE12IP0CL82 117 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 EVI2AP22794 236 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 NDPQ00604 133 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 EGFEM1PQ0D2K5 195 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 GAGE4Q13068 117 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 ZNF266Q14584 549 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 RTL8BQ17RB0 113 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 ACOT6Q3I5F7 207 aaPredicted RBP8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 UFSP1Q6NVU6 142 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 UNQ5815/PRO19632Q6UWF5 114 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 SIGLEC15Q6ZMC9 328 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 RNF183Q96D59 192 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 IGKV1D-8A0A087WSZ0 117 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 IGLC7A0M8Q6 106 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 B5MCH6 92 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 H3BQ15 152 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 FCN1O00602 326 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 OR2J3O76001 311 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 CA2P00918 260 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 RND2P52198 227 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 LINC00205P59089 165 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 DEFB136Q30KP8 78 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 C19orf54Q5BKX5 351 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms