RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 PRSS3P2Q8NHM4 247 aa11.67□□□□□ -0.54
SAMM50-203ENST00000474323 GTSF1LQ9H1H1 148 aa11.67□□□□□ -0.54
SAMM50-203ENST00000474323 INTS1Q8N201 2190 aaKnown RBP11.67□□□□□ -0.54
SAMM50-203ENST00000474323 TCRBV4S1A1TA0A5B7 111 aa11.67□□□□□ -0.54
SAMM50-203ENST00000474323 MEF2CQ06413 473 aaPredicted RBP11.67□□□□□ -0.54
SAMM50-203ENST00000474323 CD300EQ496F6 205 aaPredicted RBP11.67□□□□□ -0.54
SAMM50-203ENST00000474323 OR5AN1Q8NGI8 311 aa11.67□□□□□ -0.54
SAMM50-203ENST00000474323 THYN1Q9P016 225 aa11.67□□□□□ -0.54
SAMM50-203ENST00000474323 BSNQ9UPA5 3926 aa11.66□□□□□ -0.54
SAMM50-203ENST00000474323 IGKV1D-17A0A075B6S4 117 aa11.66□□□□□ -0.54
SAMM50-203ENST00000474323 CGB3P0DN86 165 aa11.66□□□□□ -0.54
SAMM50-203ENST00000474323 CGB7P0DN87 165 aa11.66□□□□□ -0.54
SAMM50-203ENST00000474323 ERHP84090 104 aaKnown RBP11.66□□□□□ -0.54
SAMM50-203ENST00000474323 SMAGPQ0VAQ4 97 aa11.66□□□□□ -0.54
SAMM50-203ENST00000474323 LINC00305Q7Z4B0 112 aa11.66□□□□□ -0.54
SAMM50-203ENST00000474323 LEAP2Q969E1 77 aa11.66□□□□□ -0.54
SAMM50-203ENST00000474323 TNCP24821 2201 aa11.66□□□□□ -0.54
SAMM50-203ENST00000474323 TLN1Q9Y490 2541 aaKnown RBP11.66□□□□□ -0.54
SAMM50-203ENST00000474323 TIMM8AO60220 97 aaPredicted RBP11.65□□□□□ -0.54
SAMM50-203ENST00000474323 SMIM13P0DJ93 91 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 COL8A1P27658 744 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 Q6ZS92 163 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 SLC25A48Q6ZT89 311 aaKnown RBP11.65□□□□□ -0.54
SAMM50-203ENST00000474323 PIP4P2Q8N4L2 257 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 RBMXL3Q8N7X1 1067 aaKnown RBP11.65□□□□□ -0.54
SAMM50-203ENST00000474323 GATD1Q8NB37 220 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 HIF1ANQ9NWT6 349 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 CHD8Q9HCK8 2581 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 A0A1B0GUT8 65 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 UTF1Q5T230 341 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 CNEP1R1Q8N9A8 125 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 OR10W1Q8NGF6 305 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 BLNKQ8WV28 456 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 INSIG2Q9Y5U4 225 aa11.65□□□□□ -0.54
SAMM50-203ENST00000474323 INS-IGF2F8WCM5 200 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 J3QR89 54 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 SSBP2P81877 361 aaPredicted RBP11.64□□□□□ -0.55
SAMM50-203ENST00000474323 RIGQ13278 110 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 GCSAMQ8N6F7 178 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 ZNF48Q96MX3 618 aaPredicted RBP11.64□□□□□ -0.55
SAMM50-203ENST00000474323 A0A1B0GW15 77 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 GAGE12HA6NDE8 117 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 TCRAP04437 139 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 MZT1Q08AG7 82 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 C17orf58Q2M2W7 97 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 INO80CQ6PI98 192 aaPredicted RBP11.64□□□□□ -0.55
SAMM50-203ENST00000474323 THAP8Q8NA92 274 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 C9orf106Q8NAJ2 232 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 OR8A1Q8NGG7 326 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 NPIPB3Q92617 1050 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 NDUFA4L2Q9NRX3 87 aa11.64□□□□□ -0.55
SAMM50-203ENST00000474323 SRRM5B3KS81 715 aa11.63□□□□□ -0.55
SAMM50-203ENST00000474323 OVOL3O00110 214 aa11.63□□□□□ -0.55
SAMM50-203ENST00000474323 AGFG2O95081 481 aa11.63□□□□□ -0.55
SAMM50-203ENST00000474323 S100A7AQ86SG5 101 aa11.63□□□□□ -0.55
SAMM50-203ENST00000474323 VGLL1Q99990 258 aa11.63□□□□□ -0.55
SAMM50-203ENST00000474323 PIEZO1Q92508 2521 aa11.63□□□□□ -0.55
SAMM50-203ENST00000474323 PRR14LQ5THK1 2151 aa11.63□□□□□ -0.55
SAMM50-203ENST00000474323 IGKV1D-37A0A075B6S9 117 aa11.63□□□□□ -0.55
SAMM50-203ENST00000474323 IGKV1-16P04430 117 aa11.63□□□□□ -0.55
SAMM50-203ENST00000474323 FOXI2Q6ZQN5 318 aa11.63□□□□□ -0.55
SAMM50-203ENST00000474323 TMEM116Q8NCL8 245 aa11.63□□□□□ -0.55
SAMM50-203ENST00000474323 A0A096LNJ9 63 aa11.62□□□□□ -0.55
SAMM50-203ENST00000474323 KBTBD11-OT1A0A1B0GTJ5 212 aa11.62□□□□□ -0.55
SAMM50-203ENST00000474323 TNFRSF6BO95407 300 aa11.62□□□□□ -0.55
SAMM50-203ENST00000474323 PLAUP00749 431 aa11.62□□□□□ -0.55
SAMM50-203ENST00000474323 SAA1P0DJI8 122 aaPredicted RBP11.62□□□□□ -0.55
SAMM50-203ENST00000474323 ZNRF1Q8ND25 227 aa11.62□□□□□ -0.55
SAMM50-203ENST00000474323 NCOR2Q9Y618 2525 aa11.62□□□□□ -0.55
SAMM50-203ENST00000474323 LYZL6O75951 148 aa11.62□□□□□ -0.55
SAMM50-203ENST00000474323 CT45A6P0DMU7 189 aa11.62□□□□□ -0.55
SAMM50-203ENST00000474323 CT45A5P0DMU8 189 aa11.62□□□□□ -0.55
SAMM50-203ENST00000474323 CT45A7P0DMV0 189 aa11.62□□□□□ -0.55
SAMM50-203ENST00000474323 TSSC4Q9Y5U2 329 aaPredicted RBP11.62□□□□□ -0.55
SAMM50-203ENST00000474323 ZZEF1O43149 2961 aa11.62□□□□□ -0.55
SAMM50-203ENST00000474323 ZNF207O43670 478 aaKnown RBP11.61□□□□□ -0.55
SAMM50-203ENST00000474323 CT45A10P0DMU9 189 aa11.61□□□□□ -0.55
SAMM50-203ENST00000474323 IGHV1-2P23083 117 aa11.61□□□□□ -0.55
SAMM50-203ENST00000474323 PSMG4Q5JS54 123 aa11.61□□□□□ -0.55
SAMM50-203ENST00000474323 SPATA25Q9BR10 227 aa11.61□□□□□ -0.55
SAMM50-203ENST00000474323 SPTA1P02549 2419 aa11.61□□□□□ -0.55
SAMM50-203ENST00000474323 F8W1H4 67 aa11.61□□□□□ -0.55
SAMM50-203ENST00000474323 CFHR2P36980 270 aa11.61□□□□□ -0.55
SAMM50-203ENST00000474323 IFI27P40305 119 aaPredicted RBP11.61□□□□□ -0.55
SAMM50-203ENST00000474323 KIR2DL2P43627 348 aaPredicted RBP11.61□□□□□ -0.55
SAMM50-203ENST00000474323 SUB1P53999 127 aaKnown RBP eCLIP11.61□□□□□ -0.55
SAMM50-203ENST00000474323 CACNG7P62955 275 aa11.61□□□□□ -0.55
SAMM50-203ENST00000474323 SCGB2A2Q13296 93 aa11.61□□□□□ -0.55
SAMM50-203ENST00000474323 ZCCHC24Q8N2G6 241 aaKnown RBP11.61□□□□□ -0.55
SAMM50-203ENST00000474323 Q9H3A6 140 aa11.61□□□□□ -0.55
SAMM50-203ENST00000474323 ZNF71Q9NQZ8 489 aaPredicted RBP11.61□□□□□ -0.55
SAMM50-203ENST00000474323 SIGLEC8Q9NYZ4 499 aa11.61□□□□□ -0.55
SAMM50-203ENST00000474323 DKK4Q9UBT3 224 aa11.61□□□□□ -0.55
SAMM50-203ENST00000474323 ZGRF1Q86YA3 2104 aa11.6□□□□□ -0.55
SAMM50-203ENST00000474323 ARMS2P0C7Q2 107 aa11.6□□□□□ -0.55
SAMM50-203ENST00000474323 FCGR2BP31994 310 aaPredicted RBP11.6□□□□□ -0.55
SAMM50-203ENST00000474323 Q86TA4 180 aa11.6□□□□□ -0.55
SAMM50-203ENST00000474323 PCP2Q8IVA1 136 aa11.6□□□□□ -0.55
SAMM50-203ENST00000474323 PIFOQ8TCI5 191 aa11.6□□□□□ -0.55
SAMM50-203ENST00000474323 GLMPQ8WWB7 406 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms